Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->WOX13(1)                                 ---------->DOF2                                <---------MYB52(1)                               --------->LBD16                               --------->At5g28300                                             <-----                              --------->ANAC46     <---------TOE2(3)                           <-----                             <---------LBD16      ---------->DOF2             --------->CCA1(2)<----- <---------At5g28300    --------->GLK1(1)   <---------DAG2         <---------At4g35610         <----- --------->HVH21        <---------GLK1(1)<---------ALFIN1          --------->At4g35610 ------->TEIL   aatgaccgtgtttgagaacattttggatttctccgtaaatcaaacaccttactaaagttttgtttgtgaagctgaaaacgatacaagtgaacctataacg  17358600                                                                                         <---------CCA1(1)                                                                                         <---------RVE1(1)                                        <---------HSFB2a(2)                             --------->ARR11(3)         <----------ID1         --------->TOE2(3)       --------->DAG2                  <---------ARR11(3) ----ANAC55(2)                 --------->YAB1          ---------->DOF2                  <---------GLK1(2) ----ANAC58       --------->TOE1(3)     <---------HSFC1(1)                             <---------RVE1(1) ----ANAC46       --------->TOE2(3)     ------>ZmHOX2a(1)----------->GT1  --------->GLK1(2)<---------AHL20(2) ----ANAC58      ----------->RAV1(2)    --------->HSFB2a(2)--------->AHL20(2)  ---------->DOF2   tgaatgtaacagagacaaaacctgaactctcaaacataaatcctagaagaaaatagcaaaagtaaatagagagaagaatccaaaagaagagatttttttg  17358700                                                                             ---------->DOF2                                                                      ---------->DOF2                                                                   --------->LBD16                                                                  --------------->AGL15                                                                  <---------------AGL15                                                                  --------->RAP2.6(2) --------->GLK1(2)                                                      --------->TOE2(3)  ----------->GT1   ----------                                                      --------->TOE1(3) ------------------------>ANAC81                            ----------->GT1           --------->TOE1(2) --------->DAG2--------->ARR14(2)                  --------->AHL20(2)           --------->YAB1    <-----------------AG <---------ARR14(2)   tgaagaatgtaacagagacataaatttgaactgaaaattcaattcggaaacataaaccttagaaaaaaccgcaaaaggtaaaagagagaatccaaaagaa  17358800                                                                           --------->ATERF1(1)                                                                          <---------ATERF1(1)                                                                          ------>NtERF2                                                                          <---------ERF1                                                                          <---------DEAR4(2)                                                                          <---------ORA47(2)                                                                          <---------RAP2.3(1)                                                                         <---------ANAC46                                                                         <---------DEAR3(1)                                                                         --------->DEAR3(1)                                                                         <---------RAP2.3(3)                                                                         <---------RRTF1(3)                                                                         <---------RAP2.3(2)                                                                        <---------ABI4(1)                                                                       ------->GAMYB                                                                      <---------DEAR3(1)                                                                    --------->MYB52(1)         <-----                                                                   <---------WRKY12          <-------                                                                  ======================HOX2a_HOX2a                                                                  <------ZmHOX2a(2)          --------                                                          --------->At1g77200                --------                                                          --------->DEAR3(1)     <------ZmHOX2a(1)                        ------>MYB83                     --------->MYB46(3)--------->RAP2.3(1)------>NtERF2                        ------>MYB46(1)                  --------->DEAR3(2)<------NtERF2   ------->GAMYB >DOF2        <-----------GT1              --------->GLK1(2)     <---------ARR11(3)     --------->MYB52(1)   gagttttttttttgtttttcttcaccaaatgagagaaatgtagagaatttttaaaactcaccgacgagatcaacggcggcgaaggatgaacaacggcgac  17358900                                                                             ----------->HVH21                                                                            <---------MYB52(2)                                                                           <---------At4g35610                                                                           --------->At4g35610                                              <---------YAB1             *TSS------->GAMYB                                   <---------AHL20(2)            --------->ATHB12                                   --------->AHL20(2)            -------->ATHB1 -NtERF2                       --------->AHL20(2)                --------->ATHB51 --DEAR3(1)                    --------->ATHB51--------->YAB1    <---------ICU4 ->DEAR3(1)            <----------DOF2 <---------AHL20(2)       --------->ICU4 --->HVH21    <---------At4g35610 <---------AHL20(2)            <---------YAB1                    <--   gttttggagagtttggagcagttttctttagcattatttattttttttatcagagttttttttagcattattgtgacaactgacaagttttttttttttt  17359000                                                                                                -----                   --------->AHL20(2)                                                      --------->At4g35610               <---------AHL20(2)                                                          <---------At4g35610               --------->AHL20(2)        <---------ANAC55(2)             --------->ANAC58  <---------ZAT2              --------->YAB1            <-------TEIL                     --------->ANAC58<-----------RAV1(2)           --------->WOX13(1)       ----------->GT1                 <----------DOF2---------->DOF2         ------------>CBF     ---------->DOF2                 --------->ANAC46---------->DOF2  <----- ---------GT1 --------->AHL20(2)  ---------->DOF2      <---------ALFIN1---------->DOF2 <-----------HVH21   tttctcttgtcatcaattaaaatatatgtaagaaaagaaagttacatgaaaaatgggccacttcaaacaactttcaagcccaaagtaaaggtcagcagaa  17359100                                                 --------->AHL20(2)                                                 --------->ATHB51                                                 <---------AHL20(2)                                                 <---------ICU4         <---------ATHB12                 ----------->GT1                 <----------ID1 ---->GLK1(2)            <-------TEIL   <------ZmHOX2a(2)               ---------->DOF2 ----GLK1(2) <---------ZAT6           <------ZmHOX2a(1)           ---------->DOF2        --------->ANAC46   tttggagcccaataagtgttaactaagtccataaactgaaggatcagtgaattatttcaaatggaaatgaaagagaaagacaaatttcaacacgagagaa  17359200                                                                                          <---------AHL20(1)                                                                                          --------->ARR11(3)                               <---------ARR14(2)            <---------ANAC46          --------->AHL20(2)                           <---------LBD16   --------->ATHB51----------->GT1           <---------AHL20(2)                        ------->TEIL        <---------YAB1   <---------ANAC58          --------->YAB1                <------ZmHOX2a(1)           <---------AHL20(2)            <-------TEIL--------->ICU4             <-----------RAV1(2)        ----------->GT1      <---------ANAC58    ----------->GT1    -   attgaaaacacaaaatcaggagaacgaatttcggaaactgaattgtataattgaaaaaacattgtgtgaaataacattcgttttggtaattatatattct  17359300                                    <------NtERF2                                  <---------ANAC46                                  <---------ANAC58                                                ---                                  <---------ANAC58                                              -----                                 <-----------------------TaNAC69(2)                             <----                                 <---------LBD16                                            ---------                               --------->DAG2                                               ---------                             ---------->DOF2                                                <--------                        ----------->GT1    --------->TOE1(3)            <------ZmHOX2a(1)   <--------                      ---------->DOF2      --------->TOE2(3)    <---------AHL20(2)         <---------AHL20(2)                   --------->AHL20(2)      <---------MYB59     --------->AHL20(2)          --------->AHL20(2)                   <---------AHL20(2)<-------GAMYB      <-----------GT1----------->GT1 --------->AHL20(2) -------------------->WRI1 --------->CCA1(2)        <---------YAB1---------->DOF2   <----------DOF2   tacatagaactcatcgaccatttaaaaagataaaaggcgggttaacctaaaattcttataacaaatttaaaagaggaaattagaagctttaaaataaatt  17359400                           <---------DAG2                           <----------DOF2                        <---------ALFIN1                       <---------ZAT18           --------->AHL20(1) ------->DOF2        --------->ANAC46                          --------->HSFB2a(2) ---->AHL20(2)     <-----------GT1                       <---------ARR11(3) -----AHL20(2)<<<<<<<<<<GT-3b                            --------->ARR11(3)       --------->YAB1 >AHL20(1) <---------ARR11(3)                         <---------AHL20(2)         <---------YAB1 >AHL20(2) --------->ARR11(3)                         --------->AHL20(2)        <-----------GT1------ -AHL20(2) <---------AHL20(1)    --------->ANAC46--------->AHL20(2)            --------->YAB1  <----- -AHL20(1)<---------AHL20(2)   <-----------GT1 --------->AHL20(2)      <-----------GT1   <---------TOE2(3)   aaaagcccataaatatttttcttactccacttttcactccaaataccattttaaaataaaatcttctacaatttcactctattatcattctaatgtaatg  17359500  Previous    Next  AGI:  At1g47340.1    Description:  F-box family protein. Identical to F-box protein At1g47340 [Arabidopsis Thaliana] (GB:Q0V7S0;GB:Q84WE5;GB:Q9FX05); similar to F-box family protein-related [Arabidopsis thaliana] (TAIR:AT1G47350.1); similar to F-box protein SFB [Prunus salicina] (GB:ABI15330.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 17356287    to: 17358973    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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