Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ZAT18                                             <---------ICU4                                             --------->ATHB12                                             --------->ATHB51                                             -------->ATHB1                                            --------->ICU4                                         --------->AHL20(2)                                         --------->AHL20(1)                       --------->YAB1                                         <---------AHL20(1)                      <---------YAB1                                        <---------ATHB12                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        --------->AHL20(2)                 --------->MYB46(3)                            --------->ANAC58<---------ATHB51          ----------->GT1                            --------->ANAC46--------->AHL20(2)        --------->YAB1    <---------YAB1        ---------->DOF2<---------AHL20(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <-----------GT1 ---------->DOF2   --------->MYB46(3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) >YAB1     <------ZmHOX2a(2)--------->ANAC58<---------AHL20(2)     <---------AtLEC2   gaaattactatagatcaaaacaaagtatcaaagcaataaccaataaattattgcacattcgacgagtttgaatggtaaccactataatagaaatacaatt  17337900                                                                                          xxxxxxxxxxx                   --------->YAB1                                                        <---------At4g35610                   --------->WOX13(1)    ----------->GT1                      <----------DOF2<-------                 <---------YAB1          <---------ZAT6                     <---------At4g35610             <-------GAMYB         <---------YAB1 --------->DAG2            --------->At4g35610     -         ------------>AtMYB77  <----------DOF2   ---------->DOF2         <---------At5g28300xxxxxxxxx        ----------->HVH21  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <-----------GT1 xxxxxxxxxxxxx      <----------DOF2 --------->YAB1 ---------->DOF2            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ttgtataactttgacagttattaatcacaaaaactttattaaagtgttacaaaaagttttattctcagttttttttacagctttcttatacagctctttc  17338000                                                  --------->MYB46(3)                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                 xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             <---------ZAT18 <xxxxxxxxxxxxxxxxsmallRNA(i)                          <xxxxxxxxxxxxxxxxsmallRNA(i)                          <----------DOF2 xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        --------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                --------------->AtSPL8                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->MYB52(1)                   ---                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)------->GAMYB  <---------------AtSPL8 xxx                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------MYB111(2)                  -----                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------MYB46(2)                   -----                   xxxxxxxxxxxxxxxx>smallRNA(i)--------->ZAT18 --------->MYB46(3)               <xxxx                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxsmallRNA(i)               ------               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      xxxxxxxxx              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     xxxxxxxxx              xxxxxxxxxxxxxxxx>smallRNA(i)---------->DOF2  <---------MYB55(2)              xxxxxxxxxx    <----------DOF2<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------MYB52(2)    <---------------AGL15 xxxxxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->At4g35610      <xxxxxxxxxx ---DOF2     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------MYB46(3) -------->MYB46(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <---------MYB111(1)  <-----------------AGL3 xxxxxxxxxxxxxx>smallRNA(si3)--------->ZAT14xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------------->AGL15 xxxxxxxxxx>smallRNA(i2)<---------At4g35610--------->DAG2  --------->MYB46(3) <xxxxxxxxxxxxxxxxxxxxxx   taacaactttcttatacaacttcttcagctttgcactattccgataaagcgaacaactccaactaacagctaaaaaacttgtacaatttttggttaccaa  17338100    ----------->RAV1(1)    <---------DDF1   --------->DREB2C(2)  --------->DEAR3(2) ------>YAB1 xxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------ATHB12 ->MYB83                                                                                      <------ ->MYB46(1)                                                                          ---------->DOF2 xxxxxxxxxxxxsmallRNA(i)                                                          --------->YAB1 --->WOX13(1)                                                                    <---------YAB1 xxxxxxx>smallRNA(s)     >>>>>>>>>MYB98                                    --------->AHL20(2) <------ xxxxxxxxxxxxxx>smallRNA(se3)       --------->YAB1                         <---------AHL20(2)<------- xxxxxx>smallRNA(s)  --------->ANAC58                     --------->At4g35610   --------->AHL20(2) xxxxxxxxxxxxxsmallRNA(fl3)  <-------TEIL                 <---------At4g35610   <---------AHL20(2)<-- xsmallRNA(si3)      --------->ANAC58 <---------YAB1 <----------DOF2    --------->YAB1       <-------   tcagaccgacataaaaactttgtaagtaacatacatatttataaatataagtattctttcagctaaaattgcatttataaattttaataaagtttgcttt  17338200                                                                <---------ALFIN1                            ------------>CBF                    --------->AtMYB61           ---------                     <---------AHL20(2)                      --------->ANAC46               <--------                     --------->AHL20(2)                  --------->AHL20(2)              *TSS ----DOF2            --------->AHL20(1)              --------->AHL20(2)               <-----------GT1 ---DAG2             <---------AHL20(1)         --------->AHL20(2)                --------->GLK1(1) --ANAC58   <---------AHL20(2)   <---------AHL20(2)  <---------AHL20(2)      <---------At4g35610 ---------RAV1(1)   --------->AHL20(2)    --------->GLK1(1)<-----------GT1   --------->At4g35610<---- --ANAC58   --------->AHL20(2)   --------->AHL20(2)  --------->AHL20(1)>>>>>>>>>>GATA-1-------->P   ttgttggcagaaaattaaacgaataaattatgcaattaattcagatttcaaaaaataaaataaacaccacctcgatttcatctgaaatctaccagttcct  17338300                                                <------NtERF2                                                --------->ATERF1(1)                                               <---------ATERF1(1)                                               <-----------HVH21                                               ------>NtERF2                                              --------->DEAR3(1)                         ------>ZmHOX2a(1)    <---------DEAR3(1)                --------->KAN4(2)          --------->ANAC58          ================================               <---------KAN4(1)           --------->ANAC58  --------->WRKY12                   -----               --------->HSFB2a(1)        --------->SPL7     --------->WRKY45                  <-----               <---------HSFB2a(1)      <---------SPL7       --------->WRKY38(1)             --------               <---------HSFC1(2)   --------->YAB1          <---------MYB52(1)     --------->ANAC58 >ARR14(2)     --------->HSFC1(2)   XXXXXXXXXXXXXXXXXXXX>MIR4228     -------->P    --------->ANAC58 -ARR14(2)    ------->TEIL         <---------YAB1           --------->DOF5.7(2)  <---------ALFIN1---- ------DOF2   --------->SPL7     --------->WOX13(1)        <-------GAMYB  ----------->HVH21  <-------   ttttttttgttctccgaacgttctctcctctctgtctatcatcgaacgccgtcgctctcgccgttgacttctaccagtgaccccaacgccttcaatttcc  17338400  <-----------HVH21 <---------O2 ==============================bZIP_DOF                     --------->YAB1 --------->TGA1a                                         --------->YAB1 --------->O2                                  <---------MYB52(1) ============================MYC_MYB           --------->DOF5.7(2) <---------TGA1a                             --------->ANAC55(2) ==========MYC_MYB                           --------->ANAC46 ---->ANAC46                                 --------->ANAC58 ----LBD16          <----------DOF2          <---------ANAC55(2) --------->YAB1 ->ARR14(2)     <------------MYB.PH3(1)      --------->ANAC58   <---------YAB1                    <-- -->NtERF2    <-----------GT1               <---------TOE1(2) <---------ZAT6                      <-- --ARR14(2)   ------->TEIL         <---------CCA1(2)  <----------DOF2                        <-------   gcctcgtcggataatgtaactgcttcaatttaagctcgtctcttctcacgttatctctttaatagtattatagtttcggttttggctcgaattcagtgtt  17338500                     <---------------AGL15                                                   <-------GAMYB                     --------------->AGL15                                                   <-------                    <-----------------AGL2                                                  <--------                 <---------ANAC46                                                           <--------           ------->TEIL <---------DAG2                                                      <--------           <---------YAB1                                                                  <-------TEIL  <-------TEIL   <---------ANAC58                                                         <---------ANAC46 --------->CCA1(2)  <-----------------AGL3                                              <---------MYB46(3) -------YAB1<---------ICU4                   <---------At4g35610                       <---------DEAR3(1) -------TOE2(3)  <---------ANAC58 <---------YAB1           --------->YAB1              --------->ALFIN1 --ZAT6 <---------YAB1  <----------DOF2      <---------------------WRI1                <---------AtMYB61   aagatacattatgaacattgcttctacttttggattttgaatagttcatcggagaagacaatggtgatggaagttacagagactgagcgatggtgcgttg  17338600                                                         --------->HSFB2a(1)                           --------->ARR11(3)    --------->DOF5.7(2)                       --------->ANAC46        --------->ANAC58        --------->ARR14(2)                 --------->At4g35610           --------->ANAC58        <---------ARR14(2)              --------->ARR14(1)              <---------TOE1(2)  <-------MYC3             --------->ARR14(2)               --------->SPL7  <---------ALFIN1     <---------MYB46(3)--------->ANAC58       <---------TOE2(2)  ------->MYC3                    <---    <---------AtMYB61  --------->ANAC58     <---------SPL7    --------------------->WRI1         ---- --ANAC46    --------->ARR11(1)           --------------->AtSPL3 <-------MYC2           ------>ZmHOX2a(1) -ANAC58     <---------GLK1(2)            <---------------AtSPL3 ------->MYC2         ----------->RAV1(2) -ANAC46     <---------ARR14(2)  <---------HSFB2a(2)   ------>MYB46(1)<---------CCA1(2)--------->TOE1(2) -ANAC58    <------ZmHOX2a(1)    --------->HSFB2a(2)   ------>MYB83<-------TEIL    <---------At4g35610   taactggtggtagaggattcgctgcaagacatcttgtagaaatgctcgtacgttaccaaatgttccacgttcgtatcgccgatttagctcctgcgatagt  17338700                                               <---------MYB52(1)                                            ------>ZmHOX2a(2)                                            <---------LBD16                                           --------->CCA1(2)               <---------LBD16                                           --------->ARR14(1)            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)           --------->ARR11(3)                                          --------->ARR11(1)           <---------ARR14(2)                                          --------->ARR14(2)           <-----------ARR10                                          --------->ARR11(3)           --------->ARR14(2)                                          <---------ARR14(2)           <---------ARR11(3)                                          --------->AGP1           --------->LBD16                                    --------->WOX13(1)             <---------At4g35610                      --------->GLK1(1) ----------->ARR10   --------->ANAC46              <---------ARR14(2) --------->ANAC58           --------->ANAC55(2)         <---------O2 <---------GLK1(1) --------->MYB59     <---------ANAC55(2)      ------>ZmHOX2a(1)          --------->ANAC58  <---------ZAT6  --------->At4g35610 ------ZAT18 =====================================HOX2a_HOX2a  <---------ARR14(2)                ---- ----->ZAT18 <------ZmHOX2a(1) ---------->DOF2--------->LBD16  --------->ARR14(2)             <------   gctcaatcctcacgaggaaactggaattctcggtgaagcaattagatccggtagagttcaatacgtctccgctgatcttcggaacaaaactcaagttgtc  17338800  Previous    Next  AGI:  At1g47290.1    Description:  AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1); 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating). similar to AT3BETAHSD/D2 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2), 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT2G26260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43910.1); contains InterPro domain 3-beta hydroxysteroid dehydrogenase/isomerase; (InterPro:IPR002225); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 17338289    to: 17341670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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