Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->YAB1                                   --------->MYB52(1)                         ----------->GT1                               --------------->AGL15                         <---------ATHB12                   <------ZmHOX2a(2)               ------>NtERF2          --------->AtMYB61          <---------DAG2      ----------------->AGL2   <---------MYB52(2)--------->MYB46(3)        ------->TEIL------>ZmHOX2a(2)             --------->PCF2        >>>>>>>>>>>>>>>>>LFY ---->MYB83<----------DOF2    ----------------->AGL3 ----------->RAV1(1)<<<<<<<<<<<<<<<<<LFY ---->MYB46(1)    --------->ARR14(2)     --------->ANAC58             --------->MYB46(3)          --- ------MYB59      <---------ARR14(2)     --------->ANAC58        <----------DOF2                 <---   caaatcgacgagccttttccgatctgaacatcaccaataacagaagcactcggagccacaaacacatctttatccaccaatggtgatttatcaaacacat  17325500                  <---------REM1(2)                ----------->HVH21                                   --------->RAP2.6(2)                --------->bZIP60(2)                                 ----------->RAV1(1)         <---------At4g35610                               --------->WOX13(1)        ---------->DOF2     <-----------HVH21                                  <-----------GT1      <-----------GT1     <---------SPL7                       --------->HSFC1(1)     --------->ANAC58   --------->YAB1 ------>YAB1------>NtERF2                 --------->HSFB2a(2)    --------->ANAC58  <---------ATHB12 ----TEIL--------->At4g35610              <---------HSFB2a(2)    --------->ANAC46--------->WOX13(1)   tcatcaacgtccgatgcctcgacactgaaaacaaacacaaatttctcgaatcaaattttttcaatctaagccacaaatttctccaatcaaaggtgaagac  17325600                                                               <---------HSFC1(2)                                                               --------->HSFC1(2)                                                               --------->HSFB2a(1)                                                               <---------HSFB2a(1)                                                               <---------At4g35610                                                          <---------HSFB2a(2)                                                          --------->HSFB2a(2)                                                         ------>ZmHOX2a(2)                                                         ===========================HOX2a_HOX2a                                                        <------ZmHOX2a(2)                                                        ============================HOX2a_HOX2a                                                       <---------ARR11(3)                                                       --------->ARR11(3)                                                       <---------ARR14(2)                                                       --------->GLK1(2)                                                       --------->ARR14(2)                    <-------                      ------>ZmHOX2a(2)                <---------AGP1                        <-------                    <---------AGP1                   --------->HSFC1(2)                      <-------                    --------->ARR11(3)               <---------HSFB2a(1)             --------->At5g28300                    <---------ARR14(2)               --------->HSFB2a(1)        <---------ARR14(2)          --------->MYB52(1)                         <---------HSFC1(2)         --------->ARR14(2)          <---------DOF5.7(2)                 <---------ANAC46 --------->At4g35610  ----------->GT1      <---------ZAT6--------->ARR14(2) ----------->GT1<------ZmHOX2a(1)      ------>ZmHOX2a(1)   acaaattagagataacgaattggatctagggtttcaatagagagtattaagtggaaggatctggaagcttacgatgttcctcgatacggtgacttccttg  17325700                       <---------ANAC58 --------->GLK1(2)                     <---------ARR11(3) ------->TEIL                     --------->ARR11(3) --------->ARR14(2)                <------ZmHOX2a(2)    --------->ANAC58           --------->ANAC46          --------->ANAC46   <---------ZAT6        --------->AtMYB61            --------->ANAC58   ----------->GT1       --------->MYB46(3)           --------->LBD16--------->ANAC46       --------->DEAR3(2)       --------->ARR14(2) ----------->RAV1(1)   <---------TOE1(2) --ANAC58 ------>MYB83 <---------ANAC58 <---------ARR14(2)       <---------ANAC58 --ANAC58 ------>MYB46(1) <---------WRKY18(1) --------->ARR14(2) <---------ANAC58    <---------AHL20(2) --ANAC46--------->MYB52(1)     <---------ARR14(2)--------->MYB46(3)    ------>ZmHOX2a(1)  <---------YAB1   aagaagagaaccaacgcgatcaagagcttgaccagttccacgaatccagttacccacagtgtaaattgctcgtcctagggttcccatttttttgtgattc  17325800                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                    ----------->RAV1(1)             --------->ATHB12                                             <------NtERF2                    <---------ANAC58            ----------->GT1                <-----------RAV1(1)                <---------ANAC46  <----        ---------->DOF2                    <---------REM1(1)                  <---------ANAC58<------     ----------------->AG        ---------->ID1    <---------ALFIN1          <------NtERF2  <------ZmHOX2a(1)     ----------------->AGL1  <----------DOF2<-----------HVH21       <----------DOF2--------->ICU4   tccgattacccaaagtgtgaaaatgagaaggctttgttgtttttggtgtcgctccaccagatagagagaggtttatggaggcgtattgatgggaggattt  17325900                                                                                                  <--                                                                                              -------                                                                                           <---------                                                                       --------->At4g35610<---------AHL20(2)                                                                       <---------At4g35610--------->ATHB12                                                                      --------->ANAC58   <---------AHL20(1)                                                                      --------->ANAC58   --------->AHL20(1)     <-----------GT1                                                <--------P           --------->AHL20(2) ->ARR14(2)                                                ----------->GT1               <---------AHL20(2) --ARR14(2)                                               --------->ALFIN1      ------>MYB46(1) <---- --ARR11(3)                     <---------WRKY18(1)       <---------ZAT6        ------>MYB83  ------- ->ARR11(3)                    --------->WRKY12         <---------ANAC58        --------->MYB52(1)<-- -----AHL20(2)          *TSS   --------->WRKY38(1)      <---------ANAC58      <---------MYB59 <------ ---RVE1(1)          <---------MYB52(1)                 <---------ANAC46      --------->AtMYB61<-----   ttttttttaactcgagtgagttcgtttattttgttgacctctaaatttttagagtatggagtggtaactggtaagctaaaccaaaccgaaatttattggt  17326000                                    <-------TEIL                                   --------->ARR14(1)                                  --------->ARR11(1) ----MYB83                        <---------GLK1(2)                                                 < -->MYB55(2)                    ----------->ARR10                                                  <- ---CBF                 --------->GLK1(2)                                                          -- ----P                  --------->ARR14(2)                                <------ZmHOX2a(1)        -- -->ATHB12<------------CBF<---------LBD16                                <---------At4g35610       <- ----MYB46(1)           <---------ARR14(2)                          <----------DOF2               <-- ---MYB46(3)  <---------YAB1  --------->ARR14(2)               ---------->DOF2                   ---- ----ANAC46 ----------->GT1 --------->LBD16          <------ZmHOX2a(1) <-----------RAV1(2)  ---------   tggacttacagagattgtgaatacaaaatccggatagattcgttttgcaatgtaaggagatggaacaaagctttcaggagacaaacacaaaaatgagtaa  17326100        <---------YAB1        <---------AHL20(2)        --------->AHL20(2)       <---------AHL20(1)       --------->AHL20(1)       --------->AHL20(2)      --------->YAB1     <---------YAB1    --------->AHL20(2)   <---------AHL20(2)   --------->AHL20(2)  <---------YAB1  --------->ICU4 ---------ICU4 --------ATHB51 ------->ICU4                  ----------->GT1 ------->AHL20(2)             ----------->GT1 --------AHL20(2)    --------->AHL20(2)      --------->CCA1(2) -------AHL20(1)   ----------->GT1          <---------ARR11(3)                             ---------- ----->YAB1      ---------->DOF2   --------->AHL20(2)        --------->ZAT18           --------->DAG2 -->GT1<---------AHL20(2) ---------->DOF2   --------->ARR11(3)      --------->ARR11(3)---------->DOF2   aataattaatataatttagcaaagaaaataaagagataaaaatagagatattagcttatattgtgcattggatattggaagtattgcataaagcaaagaa  17326200                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                             <---------ANAC58                                                                             <---------ANAC46                  ----------->GT1                                            <---------ANAC58                 ----------->GT1                                         <---------ANAC46           <              --------->ATHB12      ------->TEIL                         <---------ANAC58          <-              <------ZmHOX2a(1)    <---------CCA1(2)                     <---------ANAC58       <---- >DOF2      <---------TOE2(3)  <---------ANAC46  --------->WRKY18(1)   --------->GLK1(2) xxxxxxxxxxxx   atagtttttagtataaggattggaaaaaacattgtttgtatctaaaatggggtcaagaatgtagaagatggagtttcttgggtgtttttcttggagttat  17326300                                <---------DEAR3(1)                   --------->YAB1                              <-------MYC3                           <-----------GT1                              ------->MYC3                        <---------ICU4                             <---------ANAC58                     --------->YAB1                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------YAB1         --------->ALFIN1<-----------GT1                       --------->YAB1                   <xxxx  ---------->DOF2     <---------ICU4                          <---------YAB1         --------->LBD16 xxxxxxxxxxxxxxxxsmallRNA(i) <---------ANAC58           <-----------GT1              xxxxxxxxxxxxxxxx --------HSFB2a(2)   --------->ICU4                  <---------AHL20(2)             <---------ANAC55(2) -----YAB1      ----------->GT1--------->ALFIN1     <---------AHL20(2)              <xxxxxxxxxxxxxxxx xxxxxxxxxxx>smallRNA(se3) <---------ANAC46         --------->AHL20(2)              <---------ANAC46   actagaaagaagtcgggcaagtgatatttacgcgtgggcgatttctctctcaaatttttttcttcttataatcacaatctcttgttccgtcaataagttt  17326400  Previous    Next  AGI:  At1g47260.1    Description:  APFI; carbonate dehydratase. similar to GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1), carbonate dehydratase [Arabidopsis thaliana] (TAIR:AT1G19580.1); similar to unknown [Populus trichocarpa] (GB:ABK95146.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 17323613    to: 17325924    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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