Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ALFIN1            <---------ANAC46            <---------ANAC58                                   <-------GAMYB        ------>ZmHOX2a(2)                                      <---------ANAC58       <------ZmHOX2a(2)                                       <---------ANAC46      --------->ARR14(2)                                      --------->MYB52(2)      --------->GLK1(2)                                       <------MYB46(1)      <---------ARR11(3)                                      <---------MYB46(3)      <---------ARR14(2)                                      --------->MYB55(2)      <---------AGP1                                          <------MYB83      --------->ARR11(3)                                  <-----------RAV1(1)      <---------ARR14(3)                         --------->SPL7<---------ANAC58      <-----------ARR10                          ------->TEIL<---------AtMYB61      --------->ARR14(3)                   <---------WRKY12 <--------P                            <--     <------ZmHOX2a(1)                   <------ZmHOX2a(1)--------->ALFIN1                    <------     <---------GLK1(2)        --------->DAG2 <---------------AtSPL3                           <------ ------TEIL <---------ANAC58--------->CCA1(2)--------------->AtSPL8                      <---------REM1(1)   atacacaggatcttgggtgtgagaaaccagataaggggatgcaggacaacgtacctccaagtgttggttgcaaaatcaaaaacttcacaagttgtagcgt  17305700                                                   <---------TOE2(3)                                              --------->YAB1                                              <---------ICU4                                             <---------YAB1                         --------->ANAC58    --------->ICU4                 <---------At4g35610        --------->AHL20(2)                 <---------LBD16            <---------AHL20(2)         <---------MYB59 --------->ANAC58   --------->AHL20(1) ---------------AGL1  <---------KAN4(2)     <---------AHL20(1)<-----------GT1        <-----------GT1 ---ANAC58       --------->At4g35610       --------->YAB1   <----------DOF2  ----------->GT1       -- ---ANAC58     ---------->CDC5            --------->ICU4    <---------DAG2 ---------->DOF2     <-----   tctcgtttaggcctaactcagcggaataagcaaatcaaatcgaaattataattagggttctactttacaattttctccaaagtaaaattacaagttttag  17305800             <---------AHL20(2)    <---------RVE1(1)             --------->AHL20(2)   --------->ARR11(3)             --------->YAB1       <---------ARR11(3)   ----------->GT1         <---------YAB1<-----------GT1                --------->DAG2        <---------ARR11(3)      <---------TOE2(3)   ---------->DOF2        --------->ARR11(3)<---------DAG2     ----------->GT1                     --------->HSFB2a(2)      ----------->GT1  <---------AHL20(2)    --------->ANAC58                    <---------HSFB2a(2)    ---------->DOF2<---------AHL20(2)        <---------ANAC55(2)             ------->MYC3         --- ------->AHL20(2)--------->ANAC55(2)   <---------AHL20(2)                    <-------MYC3         <-- ----TOE2(3)<---------YAB1<----------DOF2    --------->ANAC58           <-----------GT1    <---------AHL20(2)   attaaaaaaagataattatatgtaattactttttgagatttttaatcaagtaaaaaaaggtaatttctctaaattaacacgttttggaacgatttttttt  17305900                            <---------ANAC58                            <---------ANAC55(1)                            <---------ANAC58                            <---------ANAC46                         --------->GLK1(1)                  <---------ANAC46            <---------AHL20(2)            --------->AHL20(2)                                      <-----------GT1      <----------DOF2    <---------GLK1(1)                         <-----------GT1                 <-  <-----------GT1 <---------ANAC58                       <---------AtMYB61  <------------------------ANAC81 ------>AHL20(2)  <---------ANAC58                     <----------DOF2 <----------DOF2             -- -------AHL20(2)<---------AHL20(2)         <------------CBF   <---------AHL20(2)            <--------   ttaatttcctttttttaattacttgggatttcgtgttcaacaagttattgttttgggctttggtttaattttccttttttttttagtctgtctcatctct  17306000                                                            <---------ZAT6                                                     <------ZmHOX2a(1)          <----------DOF2    --------->GLK1(1)                         ----------->TBP           <-----------RAV1(1)    <---------GLK1(1)      <------ZmHOX2a(1)<---------------AGL15      <---------YAB1 --------At4g35610       <---------TOE2(3)  --------------->AGL15     <------------CBF ------->At4g35610 <---------MYB46(3)      <-----------------AGL3 --------->ARR11(3) -CCA1(2)         <--------P               ----------------->AGL3 <---------ARR11(3)   catctgaattctgaaacctggttgttttaggatagagtcttctactctatatataggacttagtgtaagatttattgttgttctttcgaagatgtgttct  17306100                                                                               --------->ZAT18                                                                              --------->ALFIN1                                                                            <---------ANAC46                                                                        <---------MYB52(1)                                                                       --------->LBD16                                                                      --------->ANAC46                                                                      --------->LBD16                                                                <---------ANAC58                                                                <---------ANAC58      --------->GLK1(1)                                                               <---------HSFB2a(1)    <---------GLK1(1)                                                               --------->HSFC1(2)    <---------ARR14(2)                                      <-------TEIL             <---------HSFC1(2)<---------LBD16 ----                             --------->CCA1(2)  --------->YAB1 --------->HSFB2a(1) ----------->GT1                          ----------->GT1       --------->AtMYB61    --------->LBD16 --------->ARR14(2)                        ---------->DOF2     <---------ETT(1) <---------ARR11(3)<---------DEAR3(1)----                <---------ANAC46    <---------GLK1(2) ------->GAMYB  <---------LBD16<------NtERF2----   tgtttttcgataaatatggtgtctaagaaagataaacagattcattccgaccataaccctcaagatgcttccccggtagagtgggcggaaattcgacata  17306200                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                           --------->TOE2(2)                                                                                         <---------ARR11(3)                                                                           <---------DAG2--------->ARR11(3)      <---------ANAC58            ----------->HVH21        ------>ZmHOX2a(2)            <---------GLK1(1)      <---------ANAC58     --------->YAB1              <---------YAB1  <---------ZAT18  --------->GLK1(1)      <---------ANAC46    <---------ATHB12           <---------At4g35610   <----------DOF2 --------->TOE1(2) ----->ANAC58           --------->WOX13(1)       <---------AGP1        --------->ZAT18  <---------RVE1(1) ----->ANAC58      --------->KAN4(1)            <------MYB46(1)     <---------ANAC46   <---------ARR11(3) ----->ANAC46     <---------KAN4(2)             <------MYB83        --------->ALFIN1   --------->ARR11(3)   agctacttgcgtttcaagagaacattcaatcaggctctgacattgacgctaggtctgatgatccacagatgtgtggactttatgtctcagatatctacga  17306300                             <------ZmHOX2a(2)                             --------->GLK1(1)                             <---------GLK1(1)                            --------->ARR14(3)                            --------->ARR14(2)                            <---------ARR11(3)              <---------------AtSPL8              --------------->AtSPL3              <---------------AtSPL3      <---------MYB52(1)    <---------ARR14(3)     --------->LBD16        <---------ARR14(2)    <---------ANAC46        --------->ARR11(3)   <---------LBD16 --------->ANAC55(1) ---------GLK1(1)  --------->ANAC58 --------ARR14(2)  --------->ANAC55(2) --------ARR11(3)  ----------->GT1------>ZmHOX2a(1)                                           <------ ------->ARR14(2)  --------->ANAC58                                                           <------ ----------ARR10   <---------ANAC55(2)                                                    --------->ZAT14 ------->ARR11(3) <-----------------------TaNAC69(2)                                      <---------ZAT14 -------CCA1(2)   <-------TEIL------>ZmHOX2a(2)                                           <---------ZAT18   gtatctccgtgaattagaggtacgtaataagatctcctacttgctctgtttttggacttagaacattgacaagtttcaataggtcaatttagtatacttt  17306400                                                                            ----------->GT1                                                                            <---------ANAC46                                                                            <------MYB83  <---------REM1(1)                                                                            <------MYB46(1)                  --------->KAN4(2)                         --------->CCA1(2)             --------->ALFIN1                <---------WOX13(1)                         <---------ARR11(3)           --------->At4g35610               >>>>>>>>>ARR2                               <---------ARR14(2)           <---------At4g35610               >>>>>>>>>ARR1                               --------->ARR11(3)         <-----------RAV1(2)              --------->ATHB12                             --------->ARR14(2)    <---------KAN4(2)              --------->YAB1                   <---------GLK1(1)           --------->MYB46(2)    ---- ----DOF2    <---------YAB1                   <---------ARR14(2)           <---------AtMYB61 -------- ---DAG2--------->GLK1(2)                     --------->ARR14(2)           <---------MYB46(3)--------   atctgaagagtttctatgattgttctctgtttggacttagaatttgtggatatgttctgaagatttgtgtttttggtttggtgaatattcaggtgaagcc  17306500                                                    --------->ANAC58                                                    --------->ANAC46                <---------ICU4                      --------->ANAC58               <---------ZAT6                --------->ATHB12                    ------>MYB83               <--------P               --------->ICU4                       --------->AtLEC2         <---------MYB46(3)      <---------ARR11(3)                  --------->CCA1(2)                  <------MYB46(1)      --------->ARR11(3)                 --------->ARR11(3)                  <------MYB83 ------>DOF2   <---------YAB1            <---------ARR11(3)                <---------WOX13(1) ->ANAC58    --------->ANAC55(2) <-------TEIL  --------->ZAT6          <--------P--------->MYB52(2) ->ANAC58<----------DOF2        --------->CCA1(2)   ------>MYB46(1) <---------AtMYB61      --------->At4g35610   aaagctaagacctttacatgattacattgaaaagattcaagaagatataacaccaagcaagagaggtgttttggtagattggttagtggaagttgctgaa  17306600  Previous    Next  AGI:  At1g47220.1    Description:  CYCA3;3 (CYCLIN A3;3); cyclin-dependent protein kinase regulator. Identical to Cyclin-A3-3 (CYCA3-3) [Arabidopsis Thaliana] (GB:A0MEB5;GB:Q9C6B0); similar to CYCA3,2, cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT1G47210.2); similar to cyclin-dependent protein kinase regulator-like protein [Brassica rapa] (GB:ABB97043.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro Range:  from: 17306116    to: 17307637    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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