Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->MYB55(2)            <----            <---------ALFIN1                                      <---------MYB46(3)           ------           <---------REM1(2)                                      --------->ABI4(2)            <-----         --------->ANAC58                                         --------->MYB52(2)           ------         --------->ANAC46           --------->ANAC58             <---------AtMYB61             <-----         --------->ANAC58           --------->ANAC58             --------->ALFIN1             <------         ----------->HVH21    ----------->RAV1(1)             <---------DEAR3(1)              <------  <---------ICU4             <---------ALFIN1              ----------->HVH21                <--------  --------->YAB1             --------->REM1(1)            <---------HSFB2a(2)         <-------------- <---------YAB1            ----------->RAV1(1)            --------->HSFB2a(2)         --------->ZAT6 ------->YAB1           --------->ANAC58            ----------->ARR10      <-----------HVH21<-------- --------ICU4           --------->ANAC46        <---------HSFB2a(2)        <-----------TGA1 <-------- -------ATHB12          --------->ANAC58        --------->HSFB2a(2)<-------GAMYB      <--------------   atcatcatcactcgacacagcattcgaagcaacaccataagcctcttcttcgataagtttcgcgacggtggttgcatcgtcagatttaagagtaccgtat  17300900                                                                                   <-------TEIL                                                                                  --------->ARR14(1)                                                                                  --------->GLK1(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR11(1)                                                                                 <---------GLK1(2)                                                                                 --------->ARR14(2)                                                                               ----------->ARR10 -----CCA1(2)                                            <---------ANAC46    ----------------->AGL1 ->TEIL                                               <------NtERF2         <------NtERF2 ----ARR11(1)                                        <-----------HVH21     ------>NtERF2 --->ARR14(2)                                        ------>NtERF2       --------->ATERF1(1) ----ARR14(2)                                   --------->SPL7          <------MYB83 ---ARR14(1)               --------->ARR11(3)  <---------ARR14(2)       <------MYB46(1) ---CCA1(2)         <---------MYB46(3)         --------->ARR14(2)      <---------DREB2C(2)         -- -ANAC58         <---------ANAC46  <-----------RAV1(2)--------->ATERF1(1)<-------GAMYB            --- -AtSPL8    --------->ATHB12      <------ZmHOX2a(2)  <---------ATERF1(1)<---------DEAR3(2)    ------- -ANAC58  <---------WOX13(1)     <-----------HVH21  <---------DEAR3(1) <---------DEAR4(1)     ------- -ANAC46<------ZmHOX2a(1)  <---------ARR11(3)  --------->MYB52(1)      <---------MYB46(3)     <------ -AtSPL3=================================HOX2a_HOX2a--------->DEAR3(1) <---------DEAR3(1)    <-------   ctcttagagaggattgattcggtggataaggtctcgatcaggcgattcagaacggcgtcgcgagttttctgagtcggtggccagattcggagagagattc  17301000                                    ------>ZmHOX2a(2)                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  --------->ARR11(3)                                  --------->ARR14(2)                                  <---------AGP1 --------->LBD16                  <---------ARR11(3) ------>ZmHOX2a(1)                --------->AGP1                          <-----------HVH21        <- --------->RAV1(2)                <---------ARR14(2)                   <---------At4g35610        <-- --->ZmHOX2a(1)                  <---------CCA1(2)                    <---------AGP1             <--- -->GLK1(2)                     ----------->ARR10                     --------->ARR14(2)     -------- -->ARR14(2)                 <-----------TGA1        <---------At4g35610------>ZmHOX2a(2)  <---------MYB46(3) ---ARR14(2)                 <-----------HVH21  <---------TOE2(3)     <---------ARR14(2)  <---------AtMYB61 --GLK1(2)               <----------DOF2   <----------DOF2     --------->ARR11(3)         --------->ALFIN1   ctcctggtttcttctctgattcggcttctttcgtcagatctgtgtcttttgaggctgcttcttgagatgttggatctgtcattgcagaaatagtggtgga  17301100                  <---------DEAR3(1)                 --------->ATERF1(1)                <---------ORA47(2)                <---------RAP2.3(1)                <---------ERF1               <---------DEAR3(1)               <---------ANAC46               <---------RAP2.6(2)               --------->ATERF1(2)               <---------ATERF1(2)               <---------RAP2.3(2)               <---------RAP2.3(3)               <---------RRTF1(3)               <---------RRTF1(2)               <---------DREB2C(2)              <---------ABI4(1)              <------NtERF2             --------->ABI4(2)             <---------ERF1             <---------ATERF1(1)             <---------MYB46(3)             ------>NtERF2            ----------->HVH21            --------->ALFIN1                       --------->ARR14(2)            <---------DEAR3(1)                    <---------ARR14(2)           <---------MYB52(1)                     --------->ARR14(2)           <-----------HVH21          <---------WOX13(1)        <---------LBD16              <---------ANAC58      --------->GLK1(2)              <---------ANAC58     --------->ARR14(2)    ------>ZmHOX2a(2)    <---------MYB46(3)     <---------ARR14(2)   <------ZmHOX2a(2)    <---------DEAR3(1)     <---------GLK1(2)   --------->ARR11(3)   <------NtERF2                                       <-- ---------DOF2--------->ATERF1(1)   --------->ATHB12                                            <---- -------HSFB2a(1)<------NtERF2     <---------YAB1<-------GAMYB                       --------->GLK1(2) ------At4g35610------>NtERF2   <---------ANAC46<---------DEAR3(2)                  <---------ARR14(2) ->ALFIN1 --------->LBD16<---------ARR11(3) <---------DEAR3(1)                      <---------GLK1(2)   gctttcggattccggtggcggcgatgagatcgtggtgttgattgtctcggcggtttctgccattttcgaagtttagggattttggagattctttggaagg  17301200                                                                       <------MYB83                                                                       <---------ANAC46                                                                       <---------ANAC55(1)                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                       <------MYB46(1)                                                                      --------->MYB52(2)                  --------->ANAC58                                    <---------DEAR3(1)  <---------AHL20(2)                  --------->ANAC58                                <------MYB46(1)        <---------AHL20(2)            <---------DEAR3(2)                                    <------MYB83           --------->AHL20(2)            <---------MYB46(3)                                    <---------MYB46(3)  <---------ICU4           <---------DEAR3(1)                                    <---------AtMYB61   <---------ATHB51        --------->ETT(2)                                         --------->MYB59     --------->ICU4     ----------->TGA1                                        <------MYB83            --------->AHL20(2)   <---------ICU4 --------->ANAC55(2)                      <---------WOX13(1)        <---------AHL20(2)  <---------MYB52(1)             <----------DOF2          <------------CBF       <---------YAB1 ----ZmHOX2a(2)   --------->ANAC46       <---------ZAT14 *TSS<------MYB46(1)   --------->YAB1    ---- --ZmHOX2a(1)  <-------TEIL---------->DOF2               --------->ATHB12     <---------YAB1  -------   atcagttatgacgacggttcacgaaatgacaaagtctttagagtttagagtttagacattgattggtttggttcggtgttattataaataattaaataac  17301300                                     --------->ALFIN1                                     <---------ANAC46                                   <---------ANAC46                                  --------->ALFIN1                                  <---------AtMYB61                                    <---------ANAC58                                <---------ANAC58              <---------ICU4 --------->TOE1(3)<------                                <---------ANAC58              <---------AHL20(2)    --------->TOE2(2)        <------ZmHOX2a(1)       <-----------RAV1(1)       <---------AHL20(2) --------->TOE2(3)-------     <---------LBD16            <---------ANAC46          --------->AHL20(2) --------->YAB1  <------- --->GAMYB                  <----------DOF2         ------------>CBF      --------->YAB1  <-------TEIL -->MYB52(1)           <---------AHL20(2)       --------->ZAT14        --------->YAB1  <---------ANAC58   cgaaaattcaggaagtatttgaaatttaaactttgtgtggtggagaaaactatagtcaatataaatatttcagttataatcttaaacttacgttcaaatc  17301400                                       --------->AHL20(2)                              --------->AHL20(2)                              --------->AHL20(1)                              <---------AHL20(2)                         <---------YAB1                         --------->AHL20(2)                       --------->At4g35610--------->At4g35610        --------->AHL20(2)   <---------AHL20(2)            <---------ICU4--------->AHL20(2)        --------->AHL20(1)--------->AHL20(2)            --------->YAB1   <---------AHL20(2)        <---------AHL20(2)<---------AHL20(2)      --------->YAB1  <---------At4g35610<---------At4g35610   <---------YAB1       <---------AHL20(2)       --------->AHL20(2)      --------->AHL20(1) <-------- ---ARR11(1)  <---------TOE2(3)     <---------ANAC55(2) --------->AHL20(2)      <---------GLK1(1) -->ARR11(3) <---------At5g28300  --------->AHL20(2) --------->YAB1     <---------AHL20(2)  --------- --CCA1(2)  <-----------GT1  --------->AHL20(2)  <---------AHL20(2)     --------->AHL20(2)-----------   tttttatgaattaattacggttttattttaaattaattacataaaatacaattaataataaaaatttcagctaattttattgatatcagatgaagataat  17301500                                         <---------LBD16                                        <---------ANAC46      <---------AHL20(2)                               <---------YAB1           --------->AHL20(2) -ARR11(3)                     <---------AHL20(2)       <---------AHL20(2)    ----------->GT1 >ARR11(3)                     --------->AHL20(2) ----------->GT1 --------->YAB1 >GT1  --------->AHL20(2)--------->AHL20(2)----------->GT1   --------->AHL20(2)   atcagtatataaaatacaataaatgttttaaatataaatgttttgtggaaaatagtatatatataaaatcaaaataagtagggtaacttgattttttctt  17301600                                                       <---------------AGL15              --------->ZAT14                          --------------->AGL15             ------->GAMYB                            <-----------------AGL2    <---------YAB1           --------->At4g35610                      <---------ARR11(3)   <---------YAB1           <---------At4g35610                      --------->GLK1(2) <---------YAB1   <---------AHL20(2)      --------->ANAC55(2)<-----------GT1       <---------ICU4   --------->AHL20(2)     <---------TOE2(3)<---------YAB1           --------->YAB1  <---------AHL20(2)      --------->MYB59 <---------AHL20(2)       --------->ICU4          --------->ZAT14  <---------AHL20(1)   <----------DOF2  <---------AHL20(2)    ----------->GT1----------->TGA1    <---  --------->AHL20(2)  <---------ICU4    <---------YAB1--------->TOE2(3)--------->YAB1 --------->MYB46(3)   acaaattattttcaactgaactaatctttaggtaatccaaatattattttacaaaatctaaatagggtaataatcataaatgacgataaccactacattc  17301700                                                                                          --------->At4g35610                                                                                          <---------ZAT2                                                                                          <---------At4g35610                                                                                         ------->TEIL                                                                                 ----------------->AGL3                                                                               --------->PCF2                      <----------DOF2                                     <-----------HVH21                --------->ANAC58                                    --------->ANAC58 ------->MYC3                --------->ANAC46                                    --------->ANAC58 <-------MYC3          <----------DOF2      <---------YAB1               --------->ZAT18 --------->ETT(1)       <---------ARR11(3)     <---------ARR11(3)          <---------At4g35610<---------SPL7       --------->ARR11(3)     --------->ARR11(3)          --------->At4g35610----------->HVH21 ------YAB1     --------->ANAC58 <----------DOF2       <------ZmHOX2a(1) <-----------RAV1(1)   tcattcgactatcttttcaagcgactttgtattatctttggagagagtggaatgagaggaagctcacaacaagaaatgtcggacccatatgcagcttcta  17301800  Previous    Next  AGI:  At1g47200.1    Description:  WPP2 (WPP domain protein 2). similar to WPP1 (WPP domain protein 1) [Arabidopsis thaliana] (TAIR:AT5G43070.1); similar to MFP1 attachment factor 1 [Lycopersicon esculentum] (GB:AAF63657.1) Range:  from: 17300471    to: 17301257    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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