Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                               ------                                                                                               <-----                                                                                             --------         <---------At4g35610                                                                <--------         --------->At4g35610                                                            <----------DOF2       --------->ZAT18                                                                 <---------DAG2       <---------ZAT18                                                              xxxxxxxxxxxxxxxxx ---------HSFB2a(2)               <---------YAB1       <----------DOF2              --------->GLK1(1) -------->HSFB2a(2)   ---------->DOF2    <-----------GT1                       <---------LBD16 ------   ttccataagtgagctcattcactggaaagaagaagtatgattttctccattgctcatctttgtctgggaagtcatcgaagactcggaaacctttccgagg  17266200  --------->ANAC58  ----------->GT1  --------->ANAC58 ------->HVH21                                ------->GAMYB               --------->ARR14(2) --->ZAT2                                --------->SPL7                   --------->GLK1(2) ----O2                               <---------ANAC46      <---------AHL20(2)                      - ->LBD16                      --------->TOE2(3)    <------ZmHOX2a(1)      <---------ARR14(2)  <xxxxxx -TOE1(1)       <----------DOF2       <---------ANAC58      --------->AHL20(2)          --------->At4g35610 xxxxxx>smallRNA(si3)      <----------DOF2    ----------->HVH21          <---------ARR14(1)  -------- --->O2         <---------MYB52(1)    <---------ANAC58     --------->AHL20(2)           <---------At4g35610   tgacaagaaaaatgttccctttgttcgccctttcttaactgcgtacaactgaaggaggtcatttaatgagagagcgaatccgtcttcttcagctagagta  17266300                                                                                       --------->ALFIN1                                                                                  <-----------RAV1(2)                                                                                 --------->TGA2(2)                                                                               --------->ANAC58                                                                               --------->bZIP60(1)                                                                               <---------TGA1a                                                                               --------->ANAC58                                                                               --------->TGA1a                                                                               <---------bZIP60(1)                                                   <---------HSFB2a(2)         ======================                                  <---------ZAT2   --------->HSFB2a(2)         ======================                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    ======================                 <---------At4g35610             <------ZmHOX2a(2)            --------->SPL7              <-------TEIL   --------->ZAT18 --------->ZAT18                 <------ZmHOX2a(1) -------->ANAC46 --------->At4g35610 <---------LBD16--------->LBD16      <------ZmHOX2a(2)    ------- xxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ZAT2 ===================================HOX2a_HOX2a  ---- --->GT1   <---------DEAR3(2)<---------ZAT18 <---------ZAT18      --------->DAG2<-----------HVH21====   ataaggcacaagacggttcagataacattcgggcacaactggggaagtgcgatcccgaactcgtgcataaggtcgatcaggacgtcagggagggggaagt  17266400                                           <---------STY1(1)                                           --------->ALFIN1                                          <---------LBD16                                    --------->ALFIN1                                   ------->PIF5                                   ------->MYC4                                   <-------MYC4                                   <-------PIF5                                   <-------PIF4                                   ------->MYC2                                   ------->PIF4                                   <-------MYC3                                   ------->MYC3                                   <-------MYC2                                  <---------O2                                  --------->TGA1a                                  <---------TGA1a                           <---------LBD16                                  --------->O2                              <---------ANAC46                    --------->ARR11(3)   <---------ANAC46                  <---------LBD16             ===============================bZIP_DOF<---------GLK1(2)    --------->ARR14(2)      ---------->DOF2            ------------>OsbHLH66                   <---------ARR14(2)      ======================================bZIP_DOF<---------ARR14(2) <---------MYB46(3) =======bZIP_DOF    <---------ARR11(3) --------->ZAT18                 <---------DEAR3(2) =======================bZIP_DOF<------------OsbHLH66       <------ZmHOX2a(1)--------->LBD16 ================bZIP_DOF      <---------ZAT18     <------ZmHOX2a(1)<-----------HVH21 ---->GT1 <----------ID1       --------->ZAT18    ----------->ARR10<-----------RAV1(1) --------->At4g35610 ------>DOF2 ---------->DOF2 xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ===========================================bZIP_DOF--------->ARR14(2)<---------DREB2C(2)      ------   aaagaccgcatagcgaaaagaagatttcgaatgcgcacgtgtgccctgggggaggattctcaggacagactgtcggttcgggggaaatgagttgaatttg  17266500                       --------->ZAT2                  ------>ZmHOX2a(1)              xxxxxxxxxxxxxxxx>smallRNA(s)                                 -------->P             <---------PCF2           <---------HSFB2a(2)                  <---------At5g28300           <---------ZAT18          --------->At4g35610                   <-----------GT1           <---------DEAR3(1)       <---------At4g35610             --------->LBD16             <----        <------MYB46(1)<---------ZAT2 --------->HSFB2a(2)          <---------HSFB2a(2)    <---------ALFIN1        <------MYB83   <---------At4g35610                         --------->HSFB2a(2) <------ZmHOX2a(1)  <------ZmHOX2a(1)    --------->At4g35610                        <---------LBD16  <---------MYB52(1) ----->HVH21<---------ATERF1(1) --------->GLK1(2)           <---------MYB52(1)--------->ORA47(1)-----   acgaggaatttggtgggctcctctcagcagcgagagtctgctcgaagtcgagagcgaagtctggtatttcccgaacttaccgtccattaggaacacttcg  17266600                                                                ---------->DOF2                ------                                                             ------>ZmHOX2a(2)                 <-----                                                            <------ZmHOX2a(2)                  ------                                                            --------->CCA1(2)                 <------                                                           <---------AGP1                     <------                                                           --------->AGP1                    <-------           --------->TOE1(1)                               --------->ARR14(2)                <-------          <---------HSFB2a(2)                              <---------ARR14(2) --------->ANAC46------>NtERF2          ------>ZmHOX2a(1)       ----------->GT1          --------->ARR11(3)<---------HSFB2a(2)          <---------LBD16 <---------ALFIN1                <---------CCA1(2)  --------->HSFB2a(2)  <--     <----------DOF2     --------->MYB46(3)          <---------GLK1(1) <---------MYB52(1)    <------- -----HSFB2a(2)    ----------->HVH21       <---------AtLEC2<---------ARR11(3)<---------------------WRI1 ---->HSFB2a(2) <------NtERF2 --------->LBD16        --------->GLK1(1)<---------RAP2.6(3)    <-------   cgaactactttcctcggaggcatgacaaacaccgcgaagtaatttgcaaggagagaaatcagatctgaaagccgtttttcgcgaaactttcttaggcggc  17266700                                                                                   ------>NtERF2                                                    --------->DEAR3(1)            --------->DEAR3(1)                         <---------ARR11(3)         <---------ANAC46              <---------DEAR3(1) >NtERF2              --------->HSFB2a(2)           <---------ANAC58             --------->ATERF1(1) -NtERF2       ------>ZmHOX2a(2)                    <---------ANAC58            <---------ATERF1(1) --->At4g35610<------ZmHOX2a(2)                    <------NtERF2               ----------->HVH21 ---RAP2.3(1)--------->ARR11(3)                   ------>NtERF2            --------->LBD16 ---ATERF1(1)<---------ARR14(3)                  --------->ANAC46        <---------LBD16 --RAP2.3(2) --------->ARR14(3)                 <---------At4g35610     ------->TEIL<------NtERF2 --ATERF1(2) <-----------ARR10                  --------->ATERF1(1)   --------->ZAT14          ------ ----NtERF2  <---------ARR11(3)                <---------ATERF1(1)    --------->ZAT18<---------ANAC58 --RAP2.6(2) <---------ARR14(2)               <---------DEAR3(1)      <---------ZAT14<---------ANAC58 --DEAR3(1)  --------->ARR14(2)        --------->CCA1(2)  <---------AHL20(2)  --------->DEAR3(2) <---   cgaagaacacttgaagatcttcttcaagaactcaagaacagagatgggtctgcgccgtgtttaatctattagtgaaccggagcgacggcgagcctaagaa  17266800                                      <------NtERF2                                     --------->LBD16                                     <---------ATERF1(1)                                     ------>NtERF2                                    --------->DEAR3(1)                                    <---------DEAR3(1)                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                    --------->RAP2.3(3)                                    --------->ATERF1(2)                                    <---------ATERF1(2)                                    --------->RAP2.3(2)                                   --------->ERF1                                   --------->ORA47(2)                                   <---------LBD16                                   --------->DEAR4(2)                                   --------->RAP2.3(1)                                   --------->ATERF1(1)                                   <------NtERF2                                  <---------ATERF1(1)       --------->GLK1(1)         --------->GLK1(1)        <---------RAP2.3(1)  <---------LBD16     --------->ANAC58           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     --------->ANAC58           --------->ZAT18   <------MYB83    <------NtERF2              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   ------>NtERF2             ---------->DOF2      <------MYB46(1)                         <---------TOE2(3)  <---------DEAR3(1)        --------->ALFIN1    <---------WOX13(1)        <---------ARR11(3)       --  --------->ETT(2)          <------NtERF2      <------------CBF           --------->GLK1(2)   -------  ----------->HVH21       <---------ANAC58    <---------MYB46(3)          --------->ARR11(3)<------ZmHOX2a(1) --->ARR11(3)             <---------ANAC58    --------->ATHB12       ----------->GT1      --------->ANAC58 ---------CBF             <---------ANAC46   <---------YAB1 <---------GLK1(1)             --------->ANAC58   attggcgacggaattcgaccagaaataggcgtagagcgccggcgatgttgattggtcttcggaattctaaactgaaaatctaagaaatcgataaggaatc  17266900                        ------>MYB83                        -------->P                        ------>MYB46(1)                       --------->MYB55(1)                      --------->TOE1(2)                           --------->ANAC58           --------                      --------->TOE2(2)                   <-----------------AGL1           --------->ANAC58          -------->P  <---------MYB59        --------->GLK1(2)    --------->ANAC46         --------->ANAC46          --------->MYB52(1)                <---------GLK1(2)     --------->AtLEC2         --------->ANAC58 ------->ANAC46       <---------MYB111(1) <---------TOE2(3)       --------->ANAC58     <---------AHL20(2) -->GLK1(2)--------->DEAR3(2)  --------->GLK1(2)        --------->WOX13(1)             --------->AHL20(2)   tactccaagtgctaccggcctaaacctaccacgattctaggtctaagattccgactatctatcaattcaggcaaaattcgaaacgagaattaaacgaaag  17267000                                   <---------O2                                   --------->O2                                   <---------TGA1a                                   ============================bZIP_DOF                                   --------->TGA1a                                  <------NtERF2                                 ------>NtERF2                                ----------->HVH21                                      <---------DEAR3(2)                                --------->DEAR3(1)                                     <---------MYB46(3)                                <----------ID1                  --------->WOX13(1)    <---------TOE2(2)                                <---------DEAR3(1)  <----------DOF2                   <---------TOE1(2)                         <---------ANAC55(2)       <---------ANAC46                   <---------DEAR3(1)                         ----------->RAV1(2)   <---------MYB52(1)                  --------->MYB52(2)                       <xxxxxxxxxxxxxxxxsmallRNA(i)<---------ANAC58         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                    <---------MYB46(3)        <---------At4g35610         --------->ALFIN1       ======================================bZIP_DOF        <-----------HVH21    <-------TEIL  -----       ---------->DOF2 <-----------GT1        --------->At4g35610         ----------->HVH21    <----- -->DOF2        <------NtERF2  --------->ATERF1(1) <---------ANAC58    --------->DAG2<---------------   agaggttgagaaagagtcgggattgttacctgaggcgacgagtgagtccgatggcttttaagaggtcagtcagaaggtgaagggttcgtcggtttatata  17267100  Previous    Next  AGI:  At1g46696.1    Description:  similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT4G03830.1); similar to hypothetical protein NCU04650 [Neurospora crassa OR74A] (GB:XP_959193.2); similar to related to kinetoplast-associated protein KAP [Neurospora crassa] (GB:CAD37020.1); contains InterPro domain Protein of unknown function DUF601 (InterPro:IPR006736) Range:  from: 17264300    to: 17266623    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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