Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->At4g35610           --------->LBD16                                                 <---------At4g35610          <---------ANAC58                                                <---------MYB46(3)          <---------ANAC55(1)                                           <---------At4g35610          <---------ANAC46                                            --------->ANAC58              -          <---------ANAC58                 --------->GLK1(2)          --------->ANAC46              <          --------->ANAC55(2)          --------->ANAC55(2)            --------->ANAC58     <---------ANAC58          <---------ANAC55(2)          <---------ANAC55(2)         --------->ZAT14         <---------ANAC46     <----------DOF2                  <-------TEIL                 <---------ZAT14         <---------ANAC58 --->STY1(1)                   ------------>AtMYB77            --------->HSFB2a(2)  <---------TOE2(3) ---MYB52(1)     <-----------GT1<---------At5g28300            <---------HSFB2a(2)  <---------TOE1(3)   gggtttgctcttccgtgttaaacccatcgaaattcacagttacataatcttgaatgcaaacccttgcagaacacggctgatgaattagggtttgcgtttg  17235000                                          <---------ETT(2)                                          --------->ETT(2)                               --------->ANAC58                               --------->ANAC46                               --------->ANAC58             --------->HSFB2a(2)  ----------->RAV1(1)         <---------ANAC58    ------>ZmHOX2a(2)         <---------ANAC58   <------ZmHOX2a(2)                                  --------->GLK1(2)     <----------DOF2       <---------ARR14(3)                                 --------->ARR14(2)  ------>ZmHOX2a(2)        --------->ARR11(3)                                 <---------ARR14(2) -------->ARR11(3)         <---------ARR11(3)                                 <---------GLK1(2) ---------ARR11(3)         --------->ARR14(3) --------------------->WRI1 ------>ZmHOX2a(1)<---------HSFB2a(2)   atgatctctttgcttctccaactccttgagatctcgcaacatagtcgacattgaatccatcgcctctctcaactcctccagattctctgattttagaaga  17235100                                                          --------->bZIP60(1)                                           <---------ANAC46                                           <---------ANAC58------>NtERF2                                           <---------ANAC58----------->RAV1(1)                                       <---------WOX13(1) --------->bZIP60(2)                                     --------->ATHB12     --------->ANAC58                          <                                  <---------At4g35610     <---------bZIP60(1)    ----------------->AGL1                                --------->ZAT18           --------->ANAC58     --------->ZAT18      <            --------->AtMYB61  <------ZmHOX2a(1)       --------->DEAR3(1)   --------->ALFIN1       <-         --------->ANAC46    --------->ANAC58    --------->DAG2        ------->GAMYB    ----------->GT1   <---------At4g35610       --------->ANAC58   ---------->DOF2--------->ICU4 --------->ALFIN1   <---   --------->At4g35610--------->YAB1<---------YAB1    --------->At4g35610  <------ZmHOX2a(1) --------   ctctcatcttcccaccaaaacctttcatcacaaggacgctgattggcgagaaaagcagcgacgacattatcaacagaggagtggccaaaactgtagaaag  17235200                                                --------->SPL7 <-------GAMYB                                <-----------HVH21 ---------ANAC46                  ------>ZmHOX2a(2)                      <----------DOF2 ---------DEAR3(1)             --------->YAB1 <---------SPL7---------->DOF2 -----NtERF2                  <---------YAB1 <---------ANAC58          <---------HSFC1(2) ------DEAR3(1)      ====================HOX2a_HOX2a    <----------ID1 --------->HSFC1(2) -->DOF2             <------ZmHOX2a(1)       <---------ANAC58       <---------At4g35610    --------->SPL7   cggcgttggaattagaagaaacaggagtcgctatgatcgcaatctctgcgtccgagagaagacaaagttcagaagctttgctatacagacccttacgacg  17235300                                                                    --------->MYB46(3)                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                  ------>NtERF2                                                                 <---------ALFIN1                                                                 --------->DEAR3(1)                                                              --------->ANAC55(1)                                                              --------->ANAC46                                                  --------->HSFB2a(1)                                  <---------ARR11(3)          --------->ANAC58                                  <---------ARR14(2)          --------->ANAC58                                  --------->ARR14(2)       <---------REM1(2)                                  ------->TEIL   ----------------------->TaNAC69(2)                 ------->PIF5     <-----------ARR10     ------>ZmHOX2a(1)                 <-------PIF5    <---------CCA1(2)<---------HSFB2a(1)         <-----------GT1   <XXXXXXXXXXXXXXXXXXXXMIR835-3P <-----------HVH21 <---------MYB52(1)      -   tttggagaatgaaaccgctcgtggatttttgttctgtatcttctctatagcaatcttcctcttcacgccacccattctgttttttttctcagtttcacaa  17235400                                           <---------MYB46(3)                                           --------->MYB52(2)                                         <---------MYB52(1)                                        ------>NtERF2                                     ------>NtERF2                                     <---------At4g35610                                  --------->ZAT2                                  --------->At4g35610                                  <---------At4g35610                                  <---------ZAT2                                 <-----------RAV1(1)                                                -                                 --------->ALFIN1             --------->YAB1                        <                                --------->ZAT18              <---------YAB1                         <                                <---------ZAT14           --------->GLK1(2)                       <--                               <---------ANAC58   ---------->DOF2                               -----                               <---------ANAC58 <---------ANAC58    <---------ZAT18            <----- --------->DOF2              <---------ANAC46   <---------ANAC58<---------YAB1                 ------   acaaaagagaacgagacaagacttgagagttttgtgtgctgccgcttgttgcgaaagaagaatatgataatggactcactctcgttctaatcagatagat  17235500                                                                <---------WOX13(1)                                                              <---------ICU4                                                              --------->ATHB12 -------->AHL20(2)                                           --------->ICU4 ---------AHL20(2)                                           <---------YAB1        <----------ID1 -----------TBP                                     <---------DAG2             --------->AHL20(2) ---------TBP                                       <----------DOF2    <---------ATHB12 ---->CCA1(2)                      <---------AHL20(2)      --------->YAB1----------->GT1 ----ARR11(3)                      --------->AHL20(2)     <---------YAB1<---------ICU4 --->ARR11(3)                  <---------YAB1   <-----------GT1<------------CBF<---------AHL20(2)   atatatatagacttagtagccctaactcgttttctaattaatccatgttatttcctttttctgataattgctaatcagtaattaaacgactaaataaact  17235600                                                                                                -----                                                                                            ---------                                                                                            <--------                                                                               --------------->AGL15                        --------->ZAT18                                        --------->TOE2(3)<----                        --------->ZAT14                                        ----------------->AG                        <---------ZAT18                                        <---------------AGL15                        <---------ZAT14                                       ----------------->AG                    <---------ICU4 ----------->RAV1(2)                        <-----------------AG                    --------------->AtSPL8                             --------->YAB1    >>>>>>>>>GT-2                   --------->ICU4  --------->At4g35610             <-----------GT1     --------->At5g28300                --------->AHL20(2)--------->MYB52(1)          <----------DOF2 ----------------->AGL1              ----------->GT1   --------->MYB46(3)       --------->GLK1(1)    <-----------------AGL1            ---------->DOF2--------->ANAC46              <---------GLK1(1)    ----------------->AGL2     <----------DOF2<---------------AtSPL8            <---------YAB1  <---------ZAT6  ----------->GT1   tgttttccttttttgaaagtaattagtacacaaaaccacctgaaacaacatcgattttgatttccttttttactgataataccctaatcggtaattaaac  17235700                                                                                <---------ARR14(2)                            --------->AHL20(2)                                  <---------ARR11(1)                          ----------->GT1                                       ------->TEIL    --------->AHL20(2)   --------->DAG2                                         --------->ARR14(2) ---->ANAC46            ---------->DOF2                                         --------->GLK1(2) >AHL20(2)            --------->HSFB2a(2)                            ----------->GT1      <---------ANAC46 -AHL20(2)            <---------HSFB2a(2)                    --------->MYB52(1)<---------GLK1(2) ------ID1       <----------DOF2                         ---------->DOF2       <---------ARR14(1)   gaaaaattaaaactgtttccttttctaaaagtaaattactcaaaaccatctaatacaaacaaagaccggtttagttaaaccgaatctgtatttagtggaa  17235800                                                                                                    -                                                                                                  <<<                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                               ------                                                                                             <------MYB46(1)            --------->At5g28300                                     --------->ANAC58         <------MYB83           <---------DEAR3(2)                                       --------->ANAC58        ---------           <------MYB46(1)                                       ------>MYB46(1)            <--------           ----------->GT1                                       -------->P          <---------------           <------MYB83                                          ------>MYB83    <----------DOF2<----          <---------DREB2C(2)   <---------WOX13(1)            --------->MYB46(3)--------->TOE2(3)----          <---------MYB46(3)  --------->ATHB12      <------ZmHOX2a(1)    <---------GLK1(2)<---------MYB52(1)          <---------DEAR3(1) <---------YAB1      <------ZmHOX2a(1)  --------->AtLEC2<-----------GT1 -   tttttggtttagtcggtgaatttgtttactactgattgtctaataagcgaaggaggacgagtaaaccaacatgcaaattcttcctttaaccggtttggtc  17235900  Previous    Next  AGI:  At1g46408.1    Description:  AGL97; DNA binding / transcription factor. similar to AGL99, DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G04640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15413.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77992.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 17234575    to: 17235375    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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