Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                   <---------AHL20(2)                                                       ---------            ----------->GT1                             ---------->DOF2               <---------ANAC55(2)     <-------GAMYB --------->AHL20(2)          --------->ANAC58                       <---------ANAC58   <---------TOE1(3)                           --------->ANAC58                       <---------ANAC58   <---------TOE2(3)                       --------->ANAC58    <----------DOF2  <---------TOE2(3)  <---------At5g28300                      --------->ANAC58 <---------ARR11(3)  <---------YAB1------>ZmHOX2a(2) <-----------GT1  --------->AHL20(2)       --------->ANAC46 --------->ARR11(3)  <---------TOE1(3)   < ------AHL20(2)   <---------AHL20(2)XXXXXXXXXXXXXXXXXXXX>MIR835-3P         ------->TEIL   <---------YAB1   tatttacggttgcattgtaattttattcgtaagtgaaaaaaaaacacacaagaaaaaacaaagagcttaaatgaatgaatttaagattacttatgatctt  17149100                                        --------->AHL20(2)                                        <---------AHL20(2)                                 --------->AHL20(2)                                    <---------AHL20(1)                                    --------->YAB1                                    --------->AHL20(1)                                    <---------AHL20(2)                                  --------->AHL20(1)                                      --------->AHL20(2)                                  <---------ARR11(3)                                      <---------AHL20(1)                                  <---------AHL20(1)                             <---------ICU4 <----                                  --------->ARR11(3)                             --------->ATHB51                      <---------DAG2--------->AHL20(2)                           --------->ATHB12                      <---------------AGL15                                     <---------YAB1 <-----       --------->TOE2(3)     ----------->GT1                                    --------->ICU4 ------     <---------AHL20(2) --------->AHL20(2)   --------->AHL20(2)               <---------ICU4   ------ -ARR11(3)            <----------DOF2  <---------AHL20(2)                     --------->YAB1   <----- >ARR11(3)            --------------->AGL15 --------->AHL20(2)               <---------ATHB12 ------- ---------AHL20(1)   <-----------------AGL3 <---------AHL20(2)               <---------YAB1<---------AHL20(2)   agtatattttcttaatatgttctactttatatagaaaatattttaaataattttggtttccaaaaacaaatttggactaatcataattgcaataaaatta  17149200                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                       --------->ZAT2                                                                                       <---------ZAT2                                                                                       <------NtERF2                                                                                      <---------RAP2.6(3)                                                                                      ------>NtERF2                                                                                     <---------RAP2.6(2)                                                                                     <---------ANAC46                                                                                     --------->ATERF1(2)                                                                                     <---------ATERF1(2)                                                                                   <---------ATERF1(1)                                                                                  ----------->HVH21          <----------ID1                                                          --------->ALFIN1       <---------YAB1                                                           <---------ANAC58  <---------AtLEC2                                               --------->ALFIN1<---------SPL7  <---------ANAC58                                          <---------STY1(1)   <---------ANAC46  <---------ANAC58                                          --------->STY1(1)   <---------bZIP60(2) -----AHL20(2)                                            <---------ANAC58      <---------ANAC58 ----AHL20(1)                                             <---------ANAC58     <------NtERF2      --- --->AHL20(2)                                             <---------ANAC46 <---------At4g35610  ----- --->AHL20(1)            <---------ANAC58               --------->ZAT18    --------->ZAT2      ------ ----AHL20(2)            <---------ANAC46           --------->DAG2         --------->At4g35610------>NtERF2 -->AHL20(2)             <---------ANAC58          ---------->DOF2    --------->YAB1--------->RAP2.6(3)   atttgcatgatgagaacaaactcggtagcgagttgaactaaatttcatatgtcaaaagtggcctagggtcgagcataagctggcgtgccggcttgccacc  17149300                    -------->ATHB1                    --------->ATHB12                    --------->ATHB51                   <---------AHL20(2)                   <---------ATHB51                   --------->ICU4    <---------AHL20(2)   --------->AHL20(2)<------------CBF                                              --------->YAB1   --------->YAB1  --------->AHL20(1)                   --------->YAB1          <---------ICU4 --------->CBF     <---------YAB1                      <-------TEIL          --------->YAB1       <<< ---->AtMYB61 <------ZmHOX2a(1)              <---------YAB1                 <-------TEIL          <-- --->MYB46(3)----------->GT1   <-------TEIL<-----------GT1              <-------TEIL   <---------GLK1(2)   atcaataaaaatgtgaggaaaattattgatatatacatatttgtattaccattagcattcatacacatatcaaatgcattcataatcaaaattctcatat  17149400                                       <-------TEIL                                      --------->GLK1(2)                                      --------->ARR14(1)                  <------------CBF                                     <---------ARR14(2)                  --------->ATHB12                                     --------->ARR14(2)                  -------->ATHB1                          <XXXXXXXXXXXXXXXXXXXXMIR865-5P                 <---------ICU4             -                     <---------At4g35610                  --------->ZAT6--------->ICU4             --     ------------>CBF--------->At4g35610          <---------ZAT2------>ZmHOX2a(1)                ---- <<<<<<GT-1       <------NtERF2      <---------GLK1(2)    <-----------GT1--------->ATHB51<-------TEIL ---------GT1    --------->ANAC46    --------->ARR11(1)<---------CCA1(2)<---------ATHB51--------->AtLEC2   taaccaaaacaatctctctcggcaactcaaatggattcagattcggagtccaagctcatatcactccttactgaattattgtctctcaacatgcattatg  17149500          --------->At5g28300         ----------->GT1        <---------YAB1        <---------TOE2(3)      --------->YAB1                              --------->ANAC58     <---------YAB1                               --------->ANAC55(1)   --------->ANAC46 <---------ATHB12                                 --------->ANAC46      --------->ANAC58    <-------TEIL -------->GLK1(2)                                 --------->ANAC58      --------->ANAC58  --------->ARR14(2) ------->WOX13(1)                              <---------REM1(2)   <----------DOF2  <-----------GT1 -------->CBF              ------->TEIL <-------TEIL       <XXXXXXXXXXXXXXXXXXXXMIR822  --------->ANAC46   ccaatctattatggtaaattctactcatgtatgcaatgtgagttcattctacacgaaacatatgcaaaactttctcgcaaactatatcacccgatacatc  17149600                                     --------->ZAT18                       --------->CCA1(2)        <---------ANAC46                      --------->ARR14(2)    <---------ANAC46                          <------MYB83                      <---------ARR14(2)    <---------ANAC58             <---------ANAC58                     <------ZmHOX2a(1)      <---------ANAC58             <-------GAMYB<------MYB46(1)                 <---------ANAC46    <---------ZAT18                     <---------ANAC58            <-----------RAV1(1)   <---------ANAC46                      <---------MYB46(3)       <---          <----------DOF2<---------YAB1  <----------DOF2       <---------MYB52(1)     <---------MYB46(3)   cacatatgctcactttgttgggaggatatgatggtgttgtggactttcttgtggataattgttcagtttgttcttggttgtgcaaagttggtttcttcta  17149700                                             ----------->RAV1(1)                                          --------->ANAC58                                          --------->ANAC46                                         --------->ZAT18                                         --------->ZAT14                                         <---------ZAT18                                         <---------ZAT14                                        --------->ALFIN1                                      <---------ANAC46                                    --------->ZAT14                                    <---------ZAT14                                    --------->ZAT18                                  ------->MYC2                                  ------->MYC3                                  ------->MYC4       ---------->DOF2            <-------MYC3                    <---------WRKY38(1)  ------>ZmHOX2a(1)    ----------->GT1               <-------MYC2          --------->ANAC46               <----------DOF2  --------->ZAT18             <-------TEIL--------->ANAC58   <---------MYB52(1)       --------->TOE2(3)  <---------ZAT14          --------->At4g35610        <---------ANAC58             ------->TEIL------ --------->ALFIN1          <---------At4g35610        <---------ANAC58    <-----------HVH21   <------ ------YAB1   <------ZmHOX2a(1)--------->REM1(1)<xxxxxxxxxxxxxxxxsmallRNA(i)  --------->At4g35610   tgagtgtggtaaagaaggatgtgattttcagctacatgtgcagtgcgccacaatttccgagccattagtcaatggaggtcatatgcatcctttattccta  17149800                                                      <-----------RAV1(1)                                                     <---------YAB1                                                   --------->ATHB51                                                   -------->HAHB4                                                   <---------AHL20(2)                                                   -------->ATHB1                                                   <---------ICU4                                                   --------->ATHB12                                                  --------->ICU4                                                  <---------ATHB51                                                  <---------YAB1                                               <---------AHL20(2)                                               --------->AHL20(2)                                               <---------YAB1                                <-------                   ------->GAMYB              --------->AHL20(2)                       --------->ALFIN1       <---------LBD16                        <---------AHL20(2)                     <---------ANAC58       <-----------RAV1(2)                 <---------ARR11(3)                        <---------ANAC46    --------->ANAC46    --------->GLK1(2)  --------->ARR11(3)                        <---------ANAC58 >ZmHOX2a(1)    --------->MYB52(1)       --------->ICU4                          <---------ANAC58 ---MYB59 <------ZmHOX2a(1)              ----------->ARR10                       <---------ANAC58 <--   acatccaaaccaggagagcaacggagaatttgttcgatttgcaaagattttaattattgtcgcacaaatgaaacattcaattgccttgagtgtgactttt  17149900                                          --------->ANAC58                                       <-------TEIL                                    <---------ANAC46    ------->MYC2                                   <---------------AtSPL8                                   --------------->AtSPL3                              --------->DAG2            ------->MYC3                            ---------->DOF2             <-------MYC3                        --------------->AGL15           <-------MYC2                        --------->TOE1(3) --------->ANAC46                        --------->TOE2(3) --------->ANAC58                        <---------------AGL15          <----------TaMYB80                       ----------------->AGL1  --------->YAB1                                --------                       <-----------------AGL1 <---------YAB1                          --------->ANAC58       <---------YAB1  ----------------->AG --------->YAB1      <---------ATHB12      --------->ANAC58 ---DOF2         --------->MYB52(2)--------->MYB59 --------->ANAC58             <------ZmHOX2a(1) --------DOF2  <---------MYB52(1)--------->ALFIN1  --------->ANAC58            ----------->GT1   ctttgtgttttgaatgtgttagtttacctcaaaaggtgaggtacaagcatgataagcatatgctcaatctttcttatggagaggaaacaagtaccatgac  17150000  Previous    Next  AGI:  At1g45243.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48320.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain DC1 (InterPro:IPR004146); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 17149498    to: 17150289    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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