Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ----------->GT1 --------                             --------->MYB52(1)                            ----------->GT1 <---------ANAC46                         --------->ARR11(3)                     <---------AHL20(2) <---------AHL20(2)                         <---------ARR11(3)       <----------DOF2          --------->LBD16<---------LBD16                   ----------->GT1          <-------TEIL        --------->AHL20(2) --------->AHL20(2)   <-----------GT1<-------MYC3         <---------AHL20(2)      --------->AHL20(2) --------->AHL20(2) --------AHL20(2) ------->MYC3         --------->AHL20(2) ----------->GT1<---------LBD16----------->HVH21   tatatttacaactaaaaacatgtgtaaaatctaatggatttttaaatacatgcttttagctcgaaaaaaatttgatacggagaaaaaaatttgacgggaa  17106400            <---------ARR11(3)            --------->ARR11(3)           --------->CCA1(1)      --------->TOE2(3)                                          <---------TOE2(3)     --------->ANAC55(1)                                   <---------YAB1     --------->ANAC55(2)                                 <---------AHL20(2)     <---------ANAC55(2)                                 --------->AHL20(2)     --------->ANAC58                                   <---------AHL20(2)     --------->ANAC58                                --------->AHL20(2)     --------->ANAC46                                --------->AHL20(1)     ----------->GT1                                 <---------AHL20(2)--------->ARR11(3)    <-------TEIL                                    --------->AHL20(2) <---------ARR11(3)           <  --------->TOE2(2)                           ----------->GT1  ---------->DOF2                      =  --------->TOE1(2)                         <---------ANAC46 <---------AHL20(2)     ------->TEIL   <- --->GT1   --------->RVE1(1)               <---------LBD16--------->AHL20(1)   <----------DOF2     --   ataacatacgtaaatatctgatcaaattatctatagtacgattttgacgggaaaaaaaattattttaaaggaagagcttaactttgaatctcactaaacc  17106500                                                                                          --------->AHL20(2)                                               <---------ANAC58                           <--------ATHB1            --------->WOX13(1)                 <---------ANAC46                           <---------AHL20(2)           <---------ICU4   <----------DOF2    <---------ANAC58                           --------->ATHB51     --------->ANAC55(2) <-----------GT1       --------->ANAC55(2)                     --------->YAB1     --------->YAB1     <---------CCA1(2)      <---------ANAC55(2)    <---------AHL20(1)  <---------ICU4 ------ZmHOX2a(2)    <----------DOF2           <---------ANAC55(1)    --------->AHL20(1) <---------ATHB51 =======================HOX2a_HOX2a      <---------YAB1               <---------AHL20(2) --------->ICU4 --------ARR11(3)<----------DOF2      <----------DOF2         <---------ANAC46      ----------->GT1 ------->ARR11(3)------>ZmHOX2a(1) <-----------GT1          <---------ANAC46    --------->ATHB12   --   agatcatacataatcaatcctttcttttatctttttttttcttttcattacgtgtaatcgtgttgtgtctaatatatcagtttgatttgtaataatttga  17106600                                                                                --------->AHL20(2)                                                                             -------->ATHB1                                                                            --------->AHL20(1)                                                                            <---------YAB1                                                                            <---------AHL20(2)                                                                            --------->ICU4                                                                 --------->TOE2(3)       <---------TOE2(3)                                                               <---------ARR11(1)       ---------->DOF2                                                               ------->TEIL --------->AHL20(2)                                                               --------->ARR14(2)    --------->TOE2(3)          --------->ALFIN1          --------->ARR11(3)         <---------ARR14(2)<---------AHL20(2)   --------->DAG2       <---------TOE2(3) --------->YAB1      <---------ARR14(1)<---------AHL20(2)>>>  ---------->DOF2   <----------DOF2 <---------ARR11(3)        <---------CCA1(2)<---------YAB1 ------- ------->AHL20(2) <---------YAB1    --------->GLK1(2)     <---------DOF5.7(2)<---------ICU4 <--------   ataaaaaagggagtgttgttatctttaagtttgcccaaaatctatagtcatgttcgatgtaaacgtatcttaaacaaaattattaaatgttaaagatagt  17106700       <--------HAHB4       -------->ATHB1       --------->YAB1       --------->ATHB51                                        --------->RVE1(1)       <---------ICU4                             <---------WOX13(1)       --------->AHL20(2)                        <------------CBF      <---------ATHB51                 <---------YAB1         --------->ARR11(3)        ------------>CBF      <---------YAB1                  --------->ARR11(3)      <---------ARR11(3)        <---------YAB1      --------->ICU4              <---------AHL20(2)        <---------AHL20(2)         --------->TOE2(3)  ------------>CBF               --------->AHL20(2)        --------->AHL20(2)         --------->YAB1 >>>>>>MYB98     --------->AHL20(2)   <---------ARR11(3)  ----------->TBP          <---------CCA1(2) ---->GT1<---------YAB1   <-----------GT1       --------->ATHB12          <---------ANAC58 *TSS -ARR11(3)  <---------TOE2(3)    <---------AHL20(2)     ------>ZmHOX2a(1) <---------ANAC58--------->WOX13(1)   aacatacaattattaatgaataaatgtttaactaattaaatatcatttagtgattgtcctataaaatctcttgttttcttgtttcatatcatcaatctta  17106800                                                   --------->RVE1(1)                             <---                                                  --------->GLK1(2)                         <--------                                                  --------->ARR11(3)                      <----------         ---------->DOF2                          <---------ARR11(3)                  <xxxxxxxxxxxxxx      --------->TOE2(3)                     ----------->GT1                          --------->ICU4 --------->YAB1                         <---------ARR14(2)                      --------->YAB1   <---   cattcaaaacttaaagtattcttacatccaaaaacaaaaacaaatatggcaaaatctcttctcatggtaatgctcgtgtctatagtaatgttttacatgg  17106900                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                             --------->ARR11(3)             ---------                                                             <---------ARR11(3)             <--------                                                             <-----------ARR10              <--------                                                    --------->ALFIN1                        <--------                                                   --------->ARR11(3)      <---------ARR14(2)                                             <-----------RAV1(2)           <---------GLK1(2)--------- ------ANAC58                      <-----------RAV1(2)       <---------ARR11(1)        <------------- -AtLEC2             --------->AHL20(2)      <---------HSFB2a(2)           --------->ARR11(3) -GT1             <---------AHL20(2)    --------->At4g35610  --------->ARR14(2)      <---------ANAC46 xxxxxxxxsmallRNA(si3)<---------AHL20(2)<---------GLK1(1)    <---------ARR14(2)    <---------TGA2(2) ------ANAC58     --------->AHL20(2)  <------ZmHOX2a(1)     <---------CCA1(2)  <---------YAB1    ----   ctcgtccaatttgctcccaaaaaattaatccacattcacaggagatgccagaagatgtggccatatctccatcttcagattttgattacgtcgaagctcc  17107000    <---------At4g35610    --------->At4g35610   ------->TEIL ---------->DOF2               --------->LBD16 >At4g35610                   --------->ANAC58 -ZAT2                        --------->ANAC46      <---------ANAC58 >HSFB2a(1)                   --------->ANAC58      <---------ANAC58 >HSFC1(2)                   <---------LBD16       --------->ZAT2                              <----- -HSFB2a(1)                  --------->MYB46(3)    <---------ZAT2                       <---------ANAC58 -At4g35610                 <xxxxxxxxxxxxxxxxsmallRNA(s)                                <---------ANAC58 -HSFC1(2)                  <-----------------AGL1 <---------At4g35610                  <---------ANAC46 >ZAT2             --------->At4g35610             --------->At4g35610        <---------At4g35610 --------WRI1      <---------At4g35610     --------->ATHB12               --------->MYB52(1)   <----- ----->LBD16      --------->GLK1(2)       <---------YAB1     <---------ICU4   --------->At4g35610   cgatgaagctccattcgaagaagctgattcacccgcaatggaatatgatagggagcttgctcaccattactcggacaaacagctcaagtttcttgaggct  17107100                                                                                    <---------ANAC58                                                                           <------ZmHOX2a(1)                               <---------TOE2(3)                      <---------ANAC46    <---------AHL20(1)                          <---------ARR14(2)                          <---------ANAC55(2) --------->AHL20(1)                          --------->ARR14(2)                         <---------LBD16<---------ANAC58     ---------->DOF2    --------->LBD16                             --------->MYB52(1)    --------->ARR11(3) ----ANAC58           <---------LBD16                            --------->WOX13(1) <---------ANAC46 ----ANAC58        ---------->DOF2            ----------->GT1  ----------------->AGL1 <xxxxxxxxxxxxxx   tgctctgaaaagccgagttcaaaatgcggaaatgaggttttcaagaacatgttaaatgagacaatgccaattacggaggaatgttgtcgtgatatattga  17107200                                     <---------ARR14(2)     --------->ARR11(3)                         ----------->GT1                    --------->AHL20(1)                         <------MYB46(1)                    <---------AHL20(1)          <---------WOX13(1)         --------->ARR14(2)  <---------AHL20(2)                   -------        --------->ATHB12 <------MYB83<---------ICU4      --------->AHL20(2)         ---------->DOF2       --------->ICU4<------ZmHOX2a(1)  <-----------GT1 --------->YAB1 --------->MYB52(1)     ------- xxxxxxxxxsmallRNA(se3)  <---------MYB46(3)----------->RAV1(1)     ------->TEIL   ---------->DOF2   agatgggcaaagattgccatctaggattggttaaactcatatttgccacatatgagtataaaaatattgcatctaagggcattccaaagagcaaacaagc  17107300  Previous    Next  AGI:  At1g45190.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11990.1); contains InterPro domain Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502) Range:  from: 17106791    to: 17107444    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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