Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->YAB1                      <---------WRKY18(1) --->TOE2(3)                        --------->YAB1                        --------->MYB52(1) --->YAB1                   <---------MYB46(3)                <---------YAB1                  ------- --->TOE1(3)               --------->ALFIN1                 <---------At4g35610<---------TOE2(2) --ARR11(3)           <<<<<<<<<<<<<<<<<LFY      <------ZmHOX2a(1)   <---------YAB1      --------->MYB52(1)   taaaatcaaaaccttgtttcgaagagccagtggttctaccatgaccacgaggaacaatagtcttctgattccgattaaacggaggtttaagaacggtatc  17092600                               --------->MYB52(1)                             <---------MYB52(2)                            <---------At4g35610                            --------->At4g35610                 <------ZmHOX2a(1)                 ===================================HOX2a_HOX2a              <---------HSFB2a(2)           --------->AGP1  ------->TEIL                                                             -   <---------KAN4(2)  --------->MYB52(1)                             ----------->RAV1(1)         <---   --------->GLK1(2) ----------->TGA1                             --------->ANAC58            ------>ZmHOX2a(1)   --------->ARR14(2)----------->HVH21       <---------LBD16      --------->ANAC58         <------ZmHOX2a(2) <------ZmHOX2a(1) --------->At4g35610       ------>ZmHOX2a(2) <---------GLK1(2)          --------->ARR14(2) -->ARR14(2)  --------->HSFB2a(2) ------->GAMYB--------->LBD16 --------->ARR14(2)  <---------ALFIN1<-   ggaggaatcttcaggtctaggacctgacgaagctaaccgagttttgatccggttcaaaccagaaggaatcgcaacagtagaagaaacacctcgatcctta  17092700                                                                         <---------LBD16                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)         ------>NtERF2                                                --------->ATERF1(1)         --------->LBD16                                              <------NtERF2                 -        --------->ANAC58                                             <---------ATERF1(1)          <--        --------->ANAC46              ---------->DOF2               <---------ANAC58   --------->RAP2.3(2)        --------->ANAC58            --------->LBD16          --------->ZAT2 <---------MYB52(1)  ----- -------->GLK1(2)               --------->GLK1(2)            <---------ZAT2--------->LBD16<----------DOF2 ------YAB1               --------->YAB1       --------->TOE2(3)    <---------ANAC46--------->ARR14(2) --------GLK1(2)       --------->WOX13(1)      --------->TOE1(3)    <---------ANAC58<---------ARR14(2)   cgattctcttccgccatagcaaaatcaatgagaaattccgaaaagaaaaccctaatacctccaagctctggcgtctccggtatgaagagccgctttcatc  17092800                                                                    <---------DEAR3(1)                                                                   <------NtERF2                                                                   <---------------------WRI1                                             <---------ARR14(2)  <---------DEAR4(1)           <---------ANAC46                  --------->GLK1(2)   <---------DEAR3(1)               ---           <---------O2       --------->ARR14(2)                --------->ALFIN1                  <--        <----------ID1       <------ZmHOX2a(1) --------->YAB1   <---------ORA47(1)              -----        ----------->HVH21--------->TOE1(2)   --------->ARR14(2)<-----------HVH21               <----- <------NtERF2    <------MYB46(1)           <---------GLK1(2)<---------AtMYB61                 ------ -------->LBD16   <------MYB83--------->MYB52(1)   --------->ARR14(2)      <------ZmHOX2a(1) -------- -------LBD16     ----------->GT1  <---------DEAR3(1)        --------->MYB59                --------- ---->DEAR3(1) <------ZmHOX2a(1)<---------DEAR3(1) <---------ARR14(2) <----------CDC5 ----------->TGA1   gccggaagaagcgacgaggaaggtgaaactaggaacggcgatgagagaatcggaatccagagtgaggtcggcgatgaggaagaagacgatgacgatgatg  17092900                                                                 <------MYB83                                                                 <---------MYB46(3)                                                                 <------MYB46(1)                                                                <---------AtMYB61                                                              <---------ANAC58                                                              <-------GAMYB                                                              <---------ANAC58                                                             <---------MYB46(3)                   ---                                                             --------->ATHB12                     <--                                                             <---------DEAR3(2)               -------                                                             --------->MYB52(2)              <-------                                                             --------->MYB55(2)              --------                                                             <------MYB46(1)                <-------- ------>ICU4                                                 <------MYB83                   <-------- -------YAB1                                                <---------AtMYB61              <---------DEAR3(1) ---->YAB1                                                  <---------MYB46(3)            <------NtERF2 ----YAB1              <-------TEIL                         --------->MYB111(1)           ------>NtERF2 --->ICU4           <------ZmHOX2a(1)           --------->ZAT18<--------P              <---------LBD16 ->YAB1       >>>>>>>>>TBF1             --------->At4g35610<--------P                *TSS--------->DEAR3(1) >ICU4     >>>>>>>>>TBF1        <---------AtMYB61         <-------GAMYB          --------->MYB46(3)   atgatgagacgaagaagaagaaggattcatggttttggtgagagcttaagtgctcaatggggttggttggtttttaggcttcaacgactcgcggccgtga  17093000                                                                            <---------ZAT18                                                                          --------->At4g35610                                                                    <---------AHL20(2)         <-----   ------------>CBF                                                <---------AHL20(2)     ---------->DOF2 <----------DOF2                                                <---------AHL20(2)   ------->MYC3 ------>ARR11(3)                                                --------->AHL20(2)   <-------MYC3---- -------ARR11(3)      <---------AHL20(2)                      <---------YAB1--------->ZAT18 --------- ---->HVH21     <------------CBF                            --------->AHL20(2)  ----------->RAV1(1) < ----HVH21    --------->AHL20(2)    <---------DOF5.7(2)     <---------AHL20(2) --------->ANAC46<----- ->At5g28300  <---------AHL20(2)    <---------At5g28300    --------->AHL20(2)--------->ANAC58 <------ -ANAC58  <---------AHL20(2)       <-----------GT1         <---------AHL20(2)--------->ANAC46 ------- -ANAC58  <---------YAB1       ------>ZmHOX2a(2)           <---------AHL20(1)--------->ANAC58 -------   catctttcaatttttattaattgttttatttgatctgttaccgtttcaaaacccaaaacaaattatttttttaatgagcacacaacacatgggaaagata  17093100    <-------TEIL        <---------AHL20(2) ----CCA1(1)         --------->YAB1 ----->GLK1(2)      --------->ICU4                      <-----------GT1 -->ARR10           <---------YAB1               --------->YAB1 ---------YAB1    --------->YAB1           --------->ARR11(3)                              <---------ANAC46 ----RVE1(1)     <---------ATHB51          <---------ARR11(3)                              <---------ANAC58 ---ARR11(3)   --------->YAB1              --------->GLK1(2)                               <---------ANAC58 -->ARR11(3)  <---------YAB1              --------->CCA1(1)<----------DOF2             <------------CBF -->ARR14(2)--------->YAB1                --------->RVE1(1)<---------DAG2  <-----------GT1<---------MYB46(3)   ttctgattcatgaattacaataataataaatctctgtttgaaaaaaatctttgatattttactttttcgattagttttttctatctaaatattggttgta  17093200                                                                                                 <---                                                                       --------->LBD16           ----                                                    ----------->GT1   --------->ANAC58          <----                                                  ---------->DOF2     --------->ANAC46          -----             --------->YAB1                    *TSS--------->DAG2     --------->ANAC58   <-----------GT1          <------------CBF          ------>ZmHOX2a(1)     --------->ARR11(3)          ---------------        <---------YAB1       <---------YAB1  --------->AHL20(2)   <---------GLK1(1)   <--------------  ------->TEIL         <---------AHL20(2)  ----------->GT1<---------ARR11(3) ---------->DOF2    <----   tatgtatatgtttattgataactatgtaattctaattcctgattcaagttaataaagtaagatgttagaaacccgaaacaaaagtatatttgtaccaatt  17093300                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                                     <---------GLK1(1)                                                                                     --------->GLK1(1)                                                                                     <----------TaMYB80                                                                                    ---------->TaMYB80                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                  --------->LBD16            --------->ANAC58                                                    <---------LBD16      <---------YAB1                                                            ------>ZmHOX2a(2)  <---------AHL20(2)                                                           <------ZmHOX2a(2) <---------ICU4                <---------ARR11(3)                             <---------ARR14(2) ------AHL20(2)       ----------->GT1                                         --------->ARR14(2) ----->AHL20(2)     ------->MYC3              <---------------AtSPL3       <---------ANAC46<---------MYB52(1) -----AHL20(1)      <-------MYC3--------->CCA1(2)                          <---------ANAC55(2) ---->AHL20(2)   <---------ALFIN1             --------------->AtSPL8       --------->ANAC55(2) >AtSPL8    --------->ANAC58   --------->ARR11(3)                         <---------LBD16 --------->LBD16 -AtSPL8  ---------->DOF2  ---------->DOF2    <---------------AtSPL8   <-----------HVH21<---------LBD16 -----AHL20(2) ----------->RAV1(1)         <---------YAB1            xxxxxxxxxxxxxxxx>smallRNA(s)   taatttttatgagaaagcaacacatgggaaaaagatatactgattttgtttgtacatctatatcaaataggcctgttacggatccggatatccggtattt  17093400                                                                     ----------->RAV1(2)                                                                   --------->MYB46(3)                                                                  ------>MYB46(1)                                                                  ------>MYB83                                                                  -------->P                                                                 ------>NtERF2                   <---------ANAC55(2)                          --------->MYB46(3)                   --------->ANAC55(2)                          --------->DEAR3(1)                   --------->ANAC46                             <---------ALFIN1                <---------ARR14(2)                            --------->LBD16                <---------ARR11(1)                            ------>NtERF2                --------->ARR14(2)                           --------->ANAC46               <---------CCA1(2)                            --------->MYB46(3)              --------->LBD16                             <---------ARR14(2)             <---------ANAC58                             --------->ARR14(2)             <---------ANAC55(2)    <---------MYB52(1)    <---------ARR11(1)                  -------             <---------ANAC58     --------->ANAC55(2)    <---------CCA1(2)                   --------             <---------ANAC55(1)  <---------ANAC55(2)   --------->LBD16               ------>ZmHOX2a(1)             --------->ANAC55(2) ------>ZmHOX2a(2)     <---------ANAC58             ------>ZmHOX2a(2)            ------>ZmHOX2a(2)   <------ZmHOX2a(2)      <---------ANAC55(2)         <------ZmHOX2a(2)           <------ZmHOX2a(2)   --------->GLK1(2)       <---------ANAC58           --------->ARR11(3)          <---------ARR14(2)   --------->ARR14(2)      --------->ANAC55(2)        <---------ARR14(2)-          --------->ARR14(2)   <---------ARR14(2)      <---------ANAC55(1)     <---------HSFB2a(2) --        --------->LBD16       --------->ATERF1(1)     ------>ZmHOX2a(2)       <---------LBD16<-------      <---------LBD16         <------NtERF2          <------ZmHOX2a(2)       <---------LBD16 <-------    --------->ARR14(2)       <---------ATERF1(1)    <---------ARR14(2)    <----------TaMYB80 <-------    <---------ARR14(2)  <-----------RAV1(2)       --------->LBD16<---------ALFIN1 <---------ARR11(3)<   --------->GLK1(1) ----------->HVH21          <---------LBD16 --------->AtMYB61 --------->ARR14(2)<   <---------GLK1(1)--------->LBD16<-----------HVH21--------->ARR14(2)   <---------ARR11(3)  <-------   tggaggtatccggatccgtatccgtaacaggcggatccgtcatttcagtctccggatccgtatccgccaacccctgatattcgggatcctgaagtccgtg  17093500  Previous    Next  AGI:  At1g45160.1    Description:  kinase. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G17850.1); similar to hypothetical protein OsJ_011826 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28343.1); similar to putative protein kinase [Oryza sativa] (GB:AAK18843.1); similar to hypothetical protein OsI_012847 [Oryza sativa (indica cultivar-group)] (GB:EAY91614.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contain Range:  from: 17085986    to: 17092985    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g45165.1    Description:  Expressed protein Range:  from: 17093247    to: 17093778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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