Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ALFIN1                                        --------->MYB46(3)                                       ------>MYB83                                       ------>MYB46(1)                                      --------->ANAC46                                      --------->ANAC58           --------->TOE2(3)          --------->ANAC58          --------->ATHB12           <---------MYB55(2)          <--------HAHB4             --------->MYB46(3)          <---------ICU4          <---------ALFIN1         <---------YAB1 --------->At4g35610    ------>ZmHOX2a(1)<---------At4g35610                --      --------->At4g35610       ------>ZmHOX2a(1)               <---------CCA1(2)                 ---    ---------->CDC5     <---------At4g35610<---------ALFIN1 <-----------HVH21      <---------GLK1(2)<   agtggctcagcatcattaaacccataagctgttcctccaccagccactccttctactggcacagtcatctcttgagatactacaaaattctcaaaaacga  17084500               --------->YAB1                                    --------->ANAC58            --------->WOX13(1)                                   --------->ANAC46   <---------GLK1(2)                                             --------->ANAC58       <---------ARR11(3) -------->DOF2<---------ATHB12                                --------->TOE1(2)         --------->ARR11(3) ------>AHL20(2)                          <----------DOF2     --------->TOE2(2) <---------ANAC58 ---------TOE2(3)                     <---------ATHB12  --------->AHL20(2)      <---------ANAC58   ttaaagattgtcttcaatcatctataagctaatttctacaatcactttccaatttcaaataaaaactacgaaatagaagctagcttatgaaatcttcaag  17084600            ---------->DOF2  --------->AHL20(2)              --------->HSFB2a(2)         ---------->DOF2     <---------AHL20(2)              <---------HSFB2a(2)       <---------HSFB2a(2)----------->GT1               --------->GLK1(2)        <---------YAB1  <---------ANAC58       <---------ZAT6            <---------TOE2(3)  <---------LBD16              --  <---------ANAC58     ----------->GT1        ------>ZmHOX2a(1)      --------->MYB52(1)        ------   cgtttcgttctcaaagaagcacatcgagtgataaattttcatcaactcctattgagataatctcgagaaaacgacggagaattgcgatagtagagaagaa  17084700                           --------->ANAC58                           --------->ANAC46                           --------->ANAC58                          --------->SPL7                         --------->SPL1(1)                        --------->TOE1(2)                       <---------ANAC58                       <---------ANAC58              <---------YAB1                  <---------HSFB2a(2)                       <---------ANAC46            <-----------GT1                   --------->LBD16                    <-----------GT1             --------->YAB1                       --------->HSFB2a(2)        <---------ANAC46<---------SPL7          <---------ICU4                 <<<<<<<<<MYB2 --------->GT1   <---------------AtSPL3        --------->ICU4       <---------AHL20(2)  ---------->DOF2 --->ARR11(3) <---------YAB1 ---------->DOF2   <---------YAB1  <------------------------ANAC81      <   attgaaaattgagtatgtgattgtaccgtacgaaagagaattgagtcttattattaccattgttgtccatttttttttttggttttccgagaaagtcgca  17084800                                                                                       --------->MYB52(1)              <-----------HVH21   ================HOX2a_HOX2a                       --------->ANAC58             <----------DOF2      =================HOX2a_HOX2a                      --------->ANAC46          --------->GLK1(2)       <------ZmHOX2a(1)  <---------ANAC58               <---------ANAC55(2)         <---------GLK1(2)     <------ZmHOX2a(1)     <---------ANAC58               --------->ANAC55(2)         <---------ARR14(2)    ===================HOX2a_HOX2a                       --------->ANAC55(1) --------->GLK1(2)             ====================HOX2a_HOX2a              ---------->DOF2 --------->ARR14(2)   <----------DOF2         <---------ANAC46          --------->ANAC58 <---------ARR14(2)  <---------ANAC58       ------>ZmHOX2a(2)           --------->ANAC58     -------- ---------GLK1(2)    <---------ANAC58      <------ZmHOX2a(2)      ---------->DOF2   --------->ANAC58   gagaatctggagattctttcagggcttgaagaaggaggagagacgatcgcgttttgcgagagatttgtgaaaggaagccaaagaacacgtaagggagttc  17084900                                           *TSS                                     <---------O2                                     --------->O2                                     ==========================bZIP_DOF                                     <---------ANAC46                                     ==========================bZIP_DOF                                     <---------TGA1a                                     --------->TGA1a                                    <------NtERF2          <---------ANAC58               <---------At4g35610       <---------DAG2              <---------RAP2.6(3)     <---------ANAC58               --------->At4g35610       ========================================bZIP_DOF    <---------ANAC46 <------------CBF     ----       <----------DOF2             <-----------HVH21 --------->DAG2        --------->ATHB12  -------- ->GLK1(1)                        --------->DEAR3(1)---------->DOF2 <----------DOF2 <----------DOF2   aatttcaagctttttgttttgttttgtttttcttagccgtcgtggctaaactgaaaaagtagcttgcaggctttaactcattgaagcttttttgctgcaa  17085000                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                            ----------->GT1     --------->ANAC46          <---------ARR14(2)               ----------->GT1    <---------ALFIN1  <----------DOF2                          <---------ZAT6    --------->MYB46(3) ----->KAN4(1)  ----------->RAV1(1)  ---------->DOF2<---------AHL20(2)                           ---- ---->CBF --------->ARR14(2)        --------->AHL20(2)     <-----------GT1                     <-----   tattcttttgggaatttgcaacaaaatggtttatgaaataaaagagagttaaatttttttttatccaccctaaattttgtttaaaaaaaaaaaaacactt  17085100                                                                                              <------                                  --------->HSFB2a(2)                                        --------                                  <---------HSFB2a(2)                         <---------TOE2(2)                          --------->ANAC55(2)     --------->ATHB12         --------->YAB1    <-------                        <-----------GT1      <---------YAB1              <---------ARR11(3) <--------                    <---------AHL20(2)   --------->GLK1(1)           --------->TOE2(3)    <---------ICU4                    --------->AHL20(2)   <---------GLK1(1)        <-----------GT1        <---------YAB1 ----->AHL20(2)    <---------AHL20(2)   <---------ARR11(3)    <---------AHL20(2)         --------->ICU4 -----DOF2         --------->AHL20(2)   --------->ARR11(3)   --------->AHL20(2)       <---------AHL20(2)   taaatttgtcaactatagaaatttttttacatatttttagaagatttcttattgattagttgattttataaccaaaatcatatgttatttgattattaat  17085200                                                              <-----------GT1                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                         <---------GLK1(2)         --------->AHL20(2)                              <---------ARR11(3)         <---------AHL20(2) --------->ANAC58        <-----------GT1                      --------->AHL20(2) --------->ZAT18            --------->ANAC46   --------->AHL20(2)                        <---------AHL20(2) <---------ZAT18            --------->ANAC58   <---------AHL20(2)                    <----------DOF2 ---AHL20(2)        --------->GLK1(2)          --------->AHL20(1)                   <---------DAG2 ->AHL20(2)         --------->ARR11(3)         <---------AHL20(1)                <-----------GT1 --AHL20(2)         <---------ARR11(3)        --------->AHL20(2)              --------------->AtSPL8 -YAB1  --------->YAB1 <----------DOF2        <---------AHL20(2)          <---------AHL20(2)        <   ttgttcactattaaaatacaaaaatcttttaagccatgttttatctaattaaatttacagattttaatcttcttattttttttatacctttttaattttt  17085300                                                                                     <-----------GT1                                                                                  <---------ICU4                                                                                  <---------AHL20(2)                                                                          <---------AHL20(1)   ------                             --------->ATHB51                             --------->AHL20(2)  <------                             <---------AHL20(2)                           --------->AHL20(1)---------                             <---------ICU4                           <---------AHL20(2)   <---------ATHB51                             --------->AHL20(2)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 --------->ANAC46                        <---------AHL20(2)      --------->AHL20(2)          <<<<<<<<<MYB2     --------->ICU4               --------->AHL20(2)      <---------AHL20(2)        <------MYB46(1)   --------->YAB1                 --------->AHL20(1)   --------->AHL20(2)        <------MYB83      <---------ICU4                --------->AHL20(2)<---------AHL20(2)<-------- ---------At4g35610   --------->ZAT6          <-----------GT1  ---------->ID1<---------YAB1--------->ICU4   gaagctaatttggttttctaagtaacactaattatttatagtcagtttttacaaaaaaaaaaattgtcgtcttaaatttattatttattacaaattatga  17085400  Previous    Next  AGI:  At1g45150.1    Description:  similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ61431.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61185.1); similar to hypothetical protein OsJ_023917 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40434.1) Range:  from: 17079888    to: 17084943    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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