Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                            <---------YAB1                          --------->YAB1                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(2)                     <---------AHL20(2)                    <---------YAB1                  <---------ICU4                  -------->ATHB1                  <--------HAHB4                  -------->HAHB4                  --------->ATHB51                                                      <---------AHL20(2)                  --------->YAB1                           --------->ARR11(3)        <---------AHL20(2)                  <---------AHL20(2)                       <---------GLK1(2)   <xxxxxxxxxxxxxxxxxxxxx                 --------->ICU4                            <---------ARR11(3)  --------->TOE2(3)            --------->ANAC55(2)                    <---------AHL20(2)        --------->ARR11(3)          <-----------GT1<---------AHL20(2)        --------->AHL20(2)        <---------ARR11(3)     <---------AHL20(2)  --------->AHL20(2)    <---------AHL20(2)     ----------->GT1--------->AHL20(2)  ----------->GT1<---------ATHB51    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------YAB1 <---------- ----->AHL20(1)  <---------YAB1 <---------ICU4<---------AHL20(1)     --------->DAG2 --------->AHL20(2) ------ARR11(3)<---------ICU4--------->YAB1   <---------ARR11(3)    ---------->DOF2 <---------AHL20(2)   atattagtaaatttacataattattaatttataatattgatgagaccatatatttatataagattttcgaaaaagttattatcttattaatttatcgatt  17067300                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                --------->LBD16                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            <---------PCF5                           ----------->HVH21                         <---------LBD16     <---------AHL20(2)                      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      --------->ZAT2         --------->AHL20(2)                   ----------------->AGL1   <---------AHL20(2)               xxxxxxxxxxxxxxxx>smallRNA(s) --------->AHL20(2)           --------->ZAT6xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         ----------->GT1         <-----------GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    <---------AHL20(2)         <<<<<<<<<<<<<<<<<LFY <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->AHL20(2)                   <---------AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------AHL20(2)                  --------->AHL20(2)      < xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------AHL20(1)       <---------AHL20(2)   <---------TOE2(3) xxsmallRNA(si3)  <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------AHL20(2)          <---------AHL20(2)  ----- -GT1 <---------ICU4  <---------ZAT2    --------->AHL20(1)<-----------GT1 --------->YAB1        <----   tgtatcaatttttacactggtcccaactcgggaccggaagaatttattaatttatagatgttactaatttatcgaatattaatttatggaggttatactg  17067400                                                                                --------->ATHB51                                                                                <---------ICU4                                                                               <---------YAB1                                                                              <---------AHL20(2)          <---------ATHB12                                                   --------->YAB1    <-----------GT1           --------->ANAC46                              <---------YAB1 ---------ZAT6   --------->ARR14(2)                                        <---------ARR11(3) ---->ZAT14      <---------ARR14(2)   ----------->GT1              ----------->RAV1(1) -----ZAT14--------->YAB1   --------->ANAC46  <----------ID1      --------->MYB46(3)   tagtattaacaaatcatcaaatacgatttcacacaaaattttgaaaaaaaaacaaaattagtaatctaacaacacaagattataattgcatttccaatac  17067500                                   <---------ARR11(3)                          <---------DAG2                              <---------ATHB12                        --------->ANAC58 --------->AtMYB61                          --------->MYB46(3)                          --------->ANAC58 ----------->RAV1(1)                         -------->P--------->ARR11(3)                --------->DAG2   --------->ANAC46                       --------->MYB46(3)              --------->ANAC46        <----------DOF2                       <---------MYB55(2)            <---------HSFB2a(2)   <---------ATHB12  <-------      --------->MYB46(3)------->GAMYB>>>>>>>>>RAP2.2 --------->HSFB2a(2) --------->WOX13(1)  --------  <---------ATHB12     <---------MYB111(2) --------->YAB1           ---------->DOF2 --------->ANAC46   acaaatcaacaactcttcattctcaacaaccattcaatatctaaatcaaaattttctacaaaacccatagaaaagcaatcacttttccaccacaataaaa  17067600                                                                               <---------YAB1                                                                             <---------AHL20(2)                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                            <---------AHL20(1)                                                --------->AHL20(2)          --------->AHL20(1)                                                <---------AHL20(2)       --------->AHL20(2)                                             --------->AHL20(2)          <---------AHL20(2)                                             <---------AHL20(2)         --------->AHL20(2)                                            --------->AHL20(2)         <---------MYB52(1)   *TSS                                        --------->ICU4           --------->At4g35610<-----------GT1                                        <---------ATHB12        --------->HSFB2a(1)<-----------GT1 --AHL20(2)                ---------->DOF2--------->TOE2(3)     <---------HSFB2a(1)<---------AHL20(2) ->AHL20(2)         ------->TEIL   --------->AtLEC2           ---------->DOF2--------->AHL20(2)     <   tcgaaaacaaacattttgtatgtatatgtaaaagttaatgcaaacattaatttaaaactatatggaaagctccattaatttatttttaatctcccaacta  17067700                                                                           <---------ANAC55(2)                                                                       <-----------HVH21                                                                       <-----------TGA1                                                                      ===============================                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                      ===============================                                                                      --------->ANAC46                                         --------->ANAC58             --------->bZIP60(2)                                         --------->ANAC58             --------->TGA1a                               --------->ANAC58                       <---------O2                               --------->ANAC58                       --------->O2     --------->REM1(1)        <------NtERF2                          ------>MYB46(1)    <---------ZAT14          ------>NtERF2                           ------>MYB83<-----------GT1    --------->ZAT14         <----------ID1  ------->TEIL            --------->MYB52(1)           <---  --------->ANAC46          <---------DEAR3(1)                     --------->AtMYB61       <--------- -----------GT1            --------->ATERF1(1)            --------->GLK1(2)--------->ANAC55(2) <-----   attcactacaccaattttgtatgagagtaggcgacgaaaccacaagtacctatatcagagaatcagagaccaacgtcacttatttacacactctgttttc  17067800          <---------ANAC58                                                                       ----          <---------ANAC58                                                                       ====          <---------ANAC46                                                                      =====       <--------P                                                                               <----      <-------GAMYB                                                                            ------      <---------ANAC58                                                        <---------------AGL15      <---------ANAC58                                                        --------------->AGL15     <---------MYB46(3)         <----------DOF2                              <-----------------AGL3 =======bZIP_DOF        <----------DOF2                                      ----------------->AGL3 =============MYC_MYB<---------ARR11(3)                                      <-----------------AGL2 -------DOF2         --------->ARR11(3)                                      ----------------->AGL2 ---------------ANAC81 ------>ZmHOX2a(2)                  <-----------GT1 --------->GLK1(1)    <----- -------------------ANAC81  <----------DOF2        --------->GLK1(2)  --------->YAB1          -------   ttttttttggttgcttcttctctgatctttctttctttttttttttttgaaagaatcaatttccctctcaaatcagaaatctaaaaatgggaacaacgat  17067900                     <----------DOF2                 ------>ZmHOX2a(1)                <---------MYB59               ------>ZmHOX2a(2)             --------->ARR14(3)             <---------ARR14(3)                                  <---------ZAT14 -->ZmHOX2a(2)<------ZmHOX2a(2)                   ------>ZmHOX2a(2) =======================HOX2a_HOX2a              <------ZmHOX2a(2) =======================HOX2a_HOX2a             --------->ARR14(2)            --------->TOE1(2) --ZmHOX2a(2)--------->ARR11(3)                 <---------ARR14(2)      <---------ZAT6  ---------->DOF2 --->ARR11(3)--------->ARR14(2)             <---------WOX13(1)   <---------ZAT18------>MYB83 ----ARR11(3)<---------ARR14(2)           --------->ATHB12       --------->ZAT14------>MYB46(1)  <--- >GAMYB      <---------ARR11(3)          <---------YAB1     ------>ZmHOX2a(2) --------->TOE2(2) -----   cttggttctctccaagatcctaactttcttactaacaacaatgctgattggatccagtgtgatccagtgtagtagtgtaacctacgataagaaagctatc  17068000                                                                             --------->GLK1(2)                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)                                                                             <---------ARR11(1)                      ------>ZmHOX2a(1)                                      ------->TEIL                  <---------ARR14(2)                              ----------->GT1           <------NtERF2                                          --------->ANAC58   --------->YAB1         <---------ALFIN1                                    <---------TOE2(3)  <----------DOF2 <---------YAB1   --------->ARR14(2)                       ------>ZmHOX2a(1)<---------CCA1(2) --------TGA1--------->LBD16           <-----------GT1   ----------->RAV1(2)<---------ARR14(1) ---->YAB1------>NtERF2  ------>ZmHOX2a(1)       ---------->DOF2  --------->ANAC58  <---------YAB1   gtcatcaatggccaccgtagaatcctcctctctggttctattcactacccaagaagcactcctgaggtaagaaaaatcgaatctttatcatagaacaaaa  17068100                                                       ---------->DOF2                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                <---------ARR11(3)                                                --------->ARR14(3)          <---------ANAC58                                                <---------ARR14(2)          <---------ANAC46                                                <---------AGP1              <---------ANAC58                                                --------->ARR14(2)         <------NtERF2                         <----------DOF2        --------->ARR11(3)        ------>NtERF2                 <---------TOE2(3)              <---------ARR14(3)    <---------DEAR3(1)         <---------AHL20(2)                   ----------->ARR10  ---------->DOF2         --------->AHL20(2)              --------->ALFIN1  ---------->DOF2<---------MYB46(3)   atgggttttgtttaaatttgatgttttctttttgtttatagatgtgggaagatcttataaagaaagctaaagacggtggcttggatgttattgatactta  17068200  Previous    Next  AGI:  At1g45130.1    Description:  BGAL5 (beta-galactosidase 5); beta-galactosidase. Identical to Beta-galactosidase 5 precursor (BGAL5) [Arabidopsis Thaliana] (GB:Q9MAJ7;GB:Q93Z63;GB:Q9SCV7); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.2); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61085.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78072.1); similar to putative beta-galactosidase BG1 [Vit Range:  from: 17067692    to: 17071702    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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