Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------YAB1          <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(1)       --------->ARR11(3)         --------->AHL20(1)       <---------AHL20(1)                       <---------ANAC46      --------->AHL20(2)          --------->AHL20(1)                       <---------ANAC58       <--    --------->AHL20(2)           <---------AHL20(2)                        <---------ANAC58       ---   --------->AHL20(2)        --------->AHL20(2)                 --------->YAB1              ---------   --------->YAB1        ----------->GT1                     --------------->AGL15        <---------ANAC46 -------ARR11(3)     <---------AHL20(2)                      --------->HSFB2a(2)          <---------ANAC58 ------>ARR11(3)    --------->AHL20(2)         <---------AHL20(2)<---------AHL20(2)       <---------ANAC58 ------>GT1         <---------AHL20(2)  ----------->GT1      <---------HSFB2a(2)  <---------HSFB2a(2)   gataataaaaatataattgtatttaaattgtttatatatattgggttatatatatgcaaatttctataaaaatcaattcgtgttcggcaagagcgtgtaa  17023700                                  ----------->RAV1(1)                                 <----------ID1                               --------->ANAC58                               --------->ANAC58                            ---------->DOF2                       <----------DOF2   --------->TOE1(2)<-----------ARR10                                                    --------->AHL20(2) -------AHL20(2)    <---------AHL20(1)            --------->DAG2                 --------->ANAC58 ------>AHL20(2)    <---------ARR11(3)           ---------->DOF2                 --------->ANAC58 -->GT1             --------->ARR11(3)    --------->AHL20(2)                ----------->RAV1(2)   taaaacatgagaaattgttcaatatcttttcaaaggcaacaaaataaaacaaaaagtcaacatcgtgttggaaactatgcctgaagccaaaaaaaatact  17023800                                                            <---------AHL20(2)                                                            <---------AHL20(1)                                                      --------->ANAC58                                                      --------->ANAC46     <---------TOE1(2)                                                      --------->ANAC58     --------->LBD16              -------->ATHB1                   --------->YAB1--------->AHL20(2)              <---------ICU4                   <---------ICU4<---------AHL20(2)              --------->ATHB12   <---------DAG2--------->ATHB12           <---------ANAC46   <-------             <---------ATHB12    <----------DOF2   --------->ZAT14       <---------LBD16    <--------  <---------AHL20(2)          <-----------GT1 <---------ATHB12      --------->ZAT6        --------->MYB52(1) --------->AHL20(2)     ----------->GT1       --------->ICU4--------->AHL20(2)           ----------->HVH21   aaattttatagacgaatcattgaactcagttaatactttatttctgaaatcattacactcaatttttttaagactcgcgcgttactcgcatataacgggg  17023900                                                     <---------YAB1                                                    <---------AHL20(2)                     --------->YAB1                                                    --------->AHL20(2)                <---------ATHB12                                                   --------->YAB1                   --------->WOX13(1)                                                  <---------YAB1                    --------->YAB1                                                 --------->AHL20(1)              --------->TOE2(3)                                                 --------->AHL20(2)            --------->ICU4   <---------AHL20(2)     ------>ZmHOX2a(2)    --------->AHL20(1)             --------->ANAC58  --------->AHL20(2)     <---------At4g35610   <---------AHL20(1)             --------->ANAC58 --LBD16      <---------GLK1(1)                --------->AHL20(2)     <---------AHL20(2) --------->ANAC58 -ANAC46      --------->GLK1(1)                <---------ARR11(3)    --------->AHL20(2)  --------->ANAC58   gatatataatatagggatatcgttttgatctgatcaactaatttagcaaaatattataatctactagactataaaatagtaagcattaatcaagcataag  17024000                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                  *TSS   --------->ARR14(2)                                                  <----------DOF2     <---------YAB1                                                ------>ZmHOX2a(1)<---------At4g35610                                 --------->AHL20(2)      <---------ARR11(3)                         ------>MYB83        ---------->ID1      <---------ZAT2              ------>MYB83                         ------>MYB46(1)     <-----------GT1     --------->ZAT2              ------>MYB46(1)             <---------ANAC58    --------->AHL20(1)      --------->ARR11(3)                 ---------             <---------ANAC58   --------->YAB1  =================HOX2a_HOX2a     <---------ARR11(3)   <-----------GT1   >>>>>>>>>>MYB80        <-----------GT1      --------->At4g35610     --------->MYB52(1)   atgtattacacacttgtttgtcaaaccaaacaaaaaataatacatttttcctctttgaagatcgacgagctgatcaatggcgaaatctcactaccagcct  17024100                                                                      --------->ANAC58                                                                      <---------ANAC58                                             ------>NtERF2            --------->ANAC58                                       <---------ANAC58               --------->ANAC55(2)                                       <---------ANAC58               <---------ANAC58                                       <---------AtLEC2               <---------ANAC55(2)                                   <----------DOF2   --------->AHL20(2)        --------->AHL20(2)                              <---------ANAC58       <---------AHL20(2)  ------->TEIL                              <---------ANAC58<------NtERF2          <-------TEIL                          <---------ANAC58   <---------RAP2.6(3)  ------->GAMYB<---------AHL20(2) <-- >ANAC46                  <---------ANAC58  <---------ANAC46     --------------->AtSPL3        <-----   ctgtttcttctccttgcatcactcttgttcttgcctgctttgcatgccgtcgattttaaatactgcaacggtacgtatcaattttttaagtcttaagtta  17024200                --------->REM1(2)               --------->ALFIN1             <---------ANAC58                              <---------ARR11(3)                  ------             <---------ANAC46                              --------->ARR11(3)       >>>>>>>>>GATA-1           <---------At5g28300                       --------->YAB1         --------->ZAT6     ------ --------DOF2<---------ANAC58                       <---------ATHB12     ------>ZmHOX2a(1)     ------ ------GT1<-----------GT1                         --------->WOX13(1)     <---------CCA1(2)   <-------   ctttgtgggattttaccgtgttgatatataacacctattcttgttatttgatcaatcaaaagatttagtttgctcctatctctatagataaaacacctac  17024300                                                                                                 >>>>                                                                                                 <---                                                                                                 >>>>                                                                                                -----                                                                                                -----                                                                                             xxxxxxxx                                                                                        ------>MYB46(1)                                                                                        -------->P                                                                       xxxxxxxxxxxxxxxx>smallRNA(i)    <---------AHL20(2)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->AHL20(2)             <---------YAB1                     --------->ARR11(3)------>MYB83    --------->AHL20(1)            <---------AHL20(1)                <xxxxxxxxxxxxxxxxsmallRNA(i)-----   --------->AHL20(2)             --------->AHL20(1)             --------->ZAT14       ------>ZmHOX2a(1) >MYB46(1)                      <---------AHL20(1)               <---------ZAT14       ============== -->P                          --------->YAB1             <---------WRKY12        <---------GLK1(1) >MYB83<---------WOX13(1)   --------->TOE2(3)             <---------WRKY38(1)     --------->GLK1(1) --MYB111(1)            <----------DOF2      --------->TOE1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   tccaaattaattgacataccaattctctttccataatatttttgtaaactacgagagaagtcaaccctgtagtatctcgatgtgaattcctaccgaggtt  17024400    <------ZmHOX2a(2)   --------->ARR14(2)   <---------ARR14(2)   <---------ARR11(3)         <---------AHL20(2) >>>>>>WRKY11                <---------AHL20(1)                                       --------->ARR14(2) ------WRKY18(1)             --------->AHL20(1)                               <------MYB83 >>>>>>WRKY6              --------->AHL20(2) --------->ARR11(3)              <---------TOE1(2) ---->WRKY38(1)      <---------YAB1          --------->ARR11(1)           <---------REM1(1) ---->WRKY12       <-----------GT1           <---------ARR11(3)        <-----------RAV1(1) xxxxxxxxxxxx>smallRNA(le3) <---------AHL20(2)--------->CCA1(2)      <---------At4g35610<-------TEIL ---->WRKY45      <---------AHL20(2)     ---------->DOF2       <----------DOF2<------MYB46(1)   ----- ==========HOX2a_HOX2a--------->YAB1<---------AtLEC2          <---------ICU4<--------P<---------ARR14(2)   gaccagatcagccagtagaatttatcatatatatatttgcataaaaagatatgtagacttgccatctttgcaactgttgtaggtattggatacgtcgata  17024500                                                                             <-----------GT1                                                                         <---------AHL20(2)                                                                        --------->AHL20(2)                  <-----------GT1                                       --------->AHL20(1)               --------->GLK1(1)                                        <---------ARR11(3)         --------->ALFIN1                  <-----------GT1              <---------AHL20(1)      --------->DAG2                       --------->YAB1               <---------AHL20(2)     <---------ZAT14         ------>ZmHOX2a(2)     <---------LBD16--------->ANAC58     <---------ANAC58     ---------->DOF2  --------->LBD16     <---------YAB1          --------->ANAC58     <---------ANAC58     --------->ZAT14<---------LBD16    <---------YAB1            --------->MYB59    <-----------GT1 ---->AHL20(2) <---------GLK1(1)     ----------->GT1 --------->LBD16    --------->ARR11(3)   aaatcactaaagtggagatttctcccgatgatccctcaactgttattacaatctccggtcttacaagtaggcaatatattttctaatttccgtttcaaat  17024600  Previous    Next  AGI:  At1g45015.1    Description:  MD-2-related lipid recognition domain-containing protein / ML domain-containing protein. similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23820.1); contains InterPro domain MD-2-related lipid-recognition (InterPro:IPR003172) Range:  from: 17024050    to: 17025221    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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