Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->GLK1(2)                                                     <---------KAN4(2)                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <---------ANAC55(2)                           --------->YAB1                                          --------->ANAC55(2)<------NtERF2        <---------AHL20(2)                                         --------->MYB59--------->ALFIN1         --------->YAB1 ----HSFC1(1)                          <---------ARR14(2)   --------->LBD16      --------->AHL20(2) ----HSFB2a(2) <---------DAG2          <---------MYB52(1)  <---------ANAC46     <---------YAB1 --->HSFB2a(2) <----------DOF2---------->DOF2------->TEIL <---------LBD16    <---------YAB1        --   gaagaaaatagtctcgacttttttttttttttaaaagagcagttatgtatttgagaatgtgccggagaaaaaaaacaatactattatatatcagaattga  17011200                                                                                     --------->ARR14(2)                                                                                     <---------ARR11(3)                                                                                     <---------ARR11(1)                                                                                     <---------ARR14(2)                                                                                    <---------ARR14(1)                                                                                    ------>MYB83                                                                                    ------>MYB46(1)                                                                                  --------->AtMYB61                                --------->DAG2                        <---------YAB1<---------CCA1(2)                   --------->AHL20(2) ----------------------->TaNAC69(2) --------------->AtSPL8        --------->YAB1      xxxxxxxxxxxxxxxx>smallRNA(s)            <---------ZAT2<---------MYB111(1)       <---------YAB1  <---------AHL20(2)                           <---------At4g35610 <----------DOF2 ------->YAB1  --------->YAB1   <---------TOE2(3)           <---------ATHB12  --------->MYB46(3)   ataatacatatgataaatcatatatataatggataaggctaatgtgagtgtataagtctccaatgcttcaagctgattgtaccaccaaatctttttcaaa  17011300                         <---------AHL20(2)                         --------->AHL20(2)                         --------->YAB1                      <---------ICU4                     <---------ATHB51                     --------->ICU4                     <---------AHL20(2)                     --------->AHL20(2)                   --------->YAB1                                                                ----               --------->AHL20(2)                                                 <---------ANAC58---               <---------AHL20(2)         --------->YAB1                          <---------ANAC58<--        <---------AHL20(2)<---------AHL20(2)                         ---------->DOF2      <---------HSFB2a(2)        --------->AHL20(2)--------->AHL20(2)                        <---------ATHB12      --------->HSFB2a(2)   aaactaaaaattaaaaattaaaaataattaaaattttcaaaaaatcagaatttaggcagaacaaattgcaataaagtttttatttcttgtttctacaaat  17011400                                                  <---------AHL20(2)                                                 <---------AHL20(2)                                                 <---------AHL20(1)        <---------HSFB2a(2)          <------MYB46(1)    <---------AHL20(2)        --------->HSFB2a(2)          <------MYB83--------->AHL20(2) <---------AHL20(2)               <---------ARR14(2) <---------AHL20(2) --------->AHL20(1)      --------->TOE1(3)   <---------AHL20(2)      <---------AHL20(2) <---------AHL20(1)      --------->TOE2(3)   --------->AHL20(2)     <---------AHL20(2)        ------- ----->AHL20(2)------->TEIL       --------->ARR14(2) --------->AHL20(2)                    <---------At4g35610 ------>AHL20(2)         --------->YAB1    <----------DOF2          --------->AHL20(2)     --------->At4g35610 -------AHL20(2)     <---------AHL20(2)    --------->TOE2(3)  <----------DOF2             --------->GLK1(2)   taaaatatttctggacgtattttttaatcttaagaagataggtttctttaattaattttttattctttattttaatttttggaattgaacagaagctgat  17011500                             --------->ANAC58                          --------->LBD16                          <---------SPL7                          <---------ATERF1(1)                         --------->RAP2.6(2)                       --------->ZAT2                    --------->MYB46(3)                   --------->ANAC46                 <---------ALFIN1                --------->MYB46(3)                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------TCP20--------->ANAC58              <-----------ARR10              <---------ARR14(2)         --------->MYB52(1) --------->SPL7                                       --------->ANAC58      --------->YAB1<---------MYB55(2)                                           --------->ANAC58    <---------WOX13(1) <---------ZAT2      ---------->DOF2   <---------MYB59     *TSS           ----- -->At4g35610 --------->ARR14(2)  ---------->DOF2 <---------MYB52(1)          ------>ZmHOX2a(1) <----   gaagtgaatgataacggatccacccagccggacccaaatagccccaaaagcccttaattcatagctaacttaacccattcctcaagaaaacaaaattact  17011600                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              ------>NtERF2                                                                                              <------                                                                                            <--------                                                    ---------->DOF2                      --------->SPL7                                               ------>ZmHOX2a(2)                        <---------ARR14(2)                                              <------ZmHOX2a(2)                       --------->DEAR3(1)                                             <---------ARR11(3)                      <------NtERF2<--                                             --------->AGP1                         ------>NtERF2<---                                             --------->ARR11(3)           <---------At4g35610<-------                          <----------DOF2    --------->ARR14(2)          <---------DEAR3(1) ---------                   --------->AHL20(2)        <---------ARR14(2)       ----------->HVH21<---------SPL1(2)          ---------->DOF2<---------ANAC58   --------->GLK1(1)        --------->ATERF1(1)--------->ARR14(2)    ----------->GT1<---------AHL20(2) --------->GLK1(2)             <---------ATERF1(1)<---------SPL7 ---->TOE2(3)  ----------->GT1       <---------GLK1(2)          <---------ANAC46   ------------------ ------DOF2--------->DAG2<---------ANAC58   <---------GLK1(1)----------->HVH21     --------->ANAC46--   ttaaaacagaaaaaaagttgataaattgcttcagtgtcaaattctgagatctgtaaaagatgagcgacggagacgacgctgctagacgccgtaccgcggc  17011700    --------->ATHB12  <---------WOX13(1) --------->HVH21 ------>ATERF1(1) ------>At5g28300 ------ATERF1(1) ------MYB46(3)                                  --------->ARR14(2) -----DEAR3(1)                                   ------------------>SPL14 -----ANAC46                                     <---------ARR14(2) >NtERF2                                       --------->LBD16 -NtERF2  <---------HSFB2a(2)                 <---------ANAC46                          ------>ZmHOX2a(1) ----ABI4(1)           ------>ZmHOX2a(1)      <---------ANAC55(2)              ------>ZmHOX2a(1) ---ATERF1(1)     <---------HSFB2a(1)         <---------ANAC58          --------->ARR14(3) -LBD16   --------->HSFB2a(2)                 --------->ANAC55(2)       <---------ARR14(3) ----NtERF2       --------->HSFB2a(1)         <---------ANAC58          --------->ARR11(3) ------DEAR3(2)   <---------HSFC1(2)      --------->ARR14(2)            --------->GLK1(2) --DEAR3(1)--------->LBD16          --------->ZAT2                      <---------ARR11(3)   <------- >LBD16  <---------LBD16 --------->REM1(1)<---------ARR14(2)            <-----------ARR10    <------- >SPL14 --------->MYB52(1)      --------->ANAC46 <-----------HVH21      --------->ARR14(2)<----------DOF2 ------->WRKY38(1)--------->HSFC1(2)--------->At4g35610      <-------TEIL     --------->TOE2(3)    <-   ggtgactgattaccggaagaagctccttcatcacaaggagctcgaatcccgtgtccgaacaggttcgatttcaaaatcttcctcattctcctctttcgtt  17011800                                                                                                <----                                           ------>ZmHOX2a(1)                               <---------ANAC55(2)                           <-----------ARR10                                               --------->ANAC55(2)                           --------->GLK1(2)                                               <---------ANAC46                           --------->ARR14(2)                                              --------->bZIP60(1)                           <---------ARR11(1)                                  --------------->AGL15                           ------->TEIL <-----------GT1                        <---------------AGL15 --ANAC58                  <---------ARR14(2)                             <----------DOF2  <---------bZIP60(1) --ANAC58                 <---------ARR14(1)                    --------->ARR11(3)      ----------->TGA1 --------LBD16  <---------PCF2         <-----------GT1         <---------GLK1(1)        ----------->HVH21   ttctgggtttagtttgtgggtcaaaatcgaatctagggttttttcctactcttcgttcccattagaaatctcgagactttacttcaattagtgacgcgat  17011900                                              --------->ANAC55(2)                                            <-----------GT1                                       --------->MYB52(2)                             <-----------GT1                                       <---------MYB46(3)                     --------->TOE2(3)                                     <---------MYB52(1)                       --------->YAB1 ------DOF2                     <---------ALFIN1 --------->ATHB12       ------>ZmHOX2a(2)   <--------   tttaggggttttggagtttcgaattgaattggttccaccgtttgtttcacttgattagtcaattttgaagtcgatctcaagcttaatttcacttgttata  17012000                              --------->At4g35610                              <---------At4g35610                             ------->TEIL                    <-------GAMYB                                                --------->ATHB12                   <---------MYB46(3)              --------->At4g35610        <------ZmHOX2a(1)              <---------ANAC58<---------ZAT2       <---------At4g35610      <---------TOE2(3) <---------YAB1    ----------->GT1      --------->GLK1(2)     --------->GLK1(1) <---------YAB1 -YAB1        <---------ANAC58--------->ZAT2       --------->ZAT2      --------->MYB52(1)        ----   gttcttataaactgggtcttgtggttatatgcagctagggagaatttaagagcagctaagaaggaattcaacaaaactgaggatgatttgaagtctcttc  17012100  Previous    Next  AGI:  At1g45000.1    Description:  26S proteasome regulatory complex subunit p42D, putative. similar to RPT4A (regulatory particle triple-A 4A), ATPase [Arabidopsis thaliana] (TAIR:AT5G43010.1); similar to unknown [Populus trichocarpa] (GB:ABK93592.1); similar to 26S proteasome AAA-ATPase subunit RPT4a [Solanum tuberosum] (GB:BAC23035.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75568.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959); contains InterPro domain 26S proteasome subunit P45; (InterPro:IPR005937 Range:  from: 17011581    to: 17014326    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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