Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->TOE1(3)       --------->YAB1       --------->TOE2(3)                                                                 --------->ANAC58     -------->P                        ----------->GT1--------->ANAC58                   --------->ANAC46 -------->ZAT6              ------->TEIL <---------MYB52(1)                              --------->ANAC58 --->YAB1          <----------DOF2---------->DOF2     --------->ANAC58      ---------->ID1          <   taacacttaccataacattttctttcagtgtatgtttaaagccgtttatatggttgaagcaatgtgactaaaatttttgtagcattgaaacaagctatat  17004200                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               ======                                                                                               <-----                                                                                               <-----                                                                                             --------          --------->ARR11(3)                                                                 --------        <---------AtMYB61                        --------->CCA1(2)                           <------- ---------AtLEC2           ---------->DOF2    ----------->GT1         ----------->GT1   ----------->GT1   ttgcattgctatggtcttgttttgtgactaaaagacttggatgcagaatggatataagttaaatgtctgattttgtaaataacttatgaagagaaaatct  17004300  --------->MYB59                    --------->YAB1                                              <--- ------DOF2                     --------->ZAT14                                                  <--- -----------AGL15               <---------ZAT14                                              <------- ---------->AGL15               <---------ZAT18                                              <------- ==================================MADS_MADS                                              <---------GLK1(2) ------------AGL3             --------->At4g35610                                        <---------At4g35610 ------------AG    --------------->AGL15                                                 --------->At4g35610 ->ARR11(3)        <---------------AGL15                                              <---------ZAT14 ->GLK1(2) xxxxxxxxxxxxxxxx>smallRNA(s) <---------ICU4                                --------->ZAT14 --ARR11(3)xxxxxxxxxxxxxxxx>smallRNA(i)<---------YAB1                 ---------->DOF2 <---------ZAT18   ttattcggtaagagttgttttctcaatgtagcagttcactcatcattttcaaacttcaactctcagagaacacaaagaggttagacagtgcagatgctta  17004400                <<<<<<<<<<<<<<<<<LFY                                   <-------TEIL                --------->MYB52(1)                                   <---------ARR14(2)                ------>MYB46(1)                                      <---------GLK1(2)                ------>MYB83         <-----------RAV1(1)             --------->ARR14(2)               --------->MYB55(1) <---------MYB52(1)             ------->MYC2              <---------MYB59  <---------RAP2.6(2)               <-------MYC2                      --      --------->GLK1(2)        <---------DEAR3(1)                <-------MYC3        <------MYB46(1) ------YAB1   <---------MYB46(2)  --------->ARR14(2)             ------->MYC3        <------MYB83  <- ------TOE2(3)<---------MYB111(1) <---------ARR14(2)       --------->MYB46(2)       --------->MYB111(1) --ANAC58    --------->ANAC55(2) <-------GAMYB             --------->MYB59          <---------------AtSPL8 --ANAC58<----------DOF2    --------->ANAC46 <------ZmHOX2a(2) <-------TEIL        <--------P<------ZmHOX2a(1)   tggttgagaagctttacctaacaatggtacaaggcggttttgttgggatcacatgtgaagttaggcacatggattcgttcttggagttggtacaaggact  17004500                                                                              <------MYB46(1)                          <------ZmHOX2a(1)                                   ----------->GT1                       --------->YAB1                                         <------MYB83               <---------ANAC46                                  <---------------AGL15               ----------->GT1                           *TSS   <-----------------AGL3              <---------TOE2(3)  --------->WRKY45      --------->TOE1(3)     --------->MYB59        ------------>CBF <----------ID1                --------->TOE2(3)  --------->ARR14(2) ---------->DOF2       <---------ICU4                  --------->YAB1     <---------ARR14(2)     <--- ------->HSFB2a(2)  --------->YAB1 >>>>>>>>>WRKY6<----------DOF2<-----------------AGL2        <------ --------HSFB2a(2) <---------YAB1--------->WRKY38(1)<---------CCA1(2)    <------ZmHOX2a(1)<---------ZAT14   tctaaaagacaacaatgaggtataataaggacaagttgactatgtctctctcttttatcttaacattctaaattaggatttggtaaactgagagcagtta  17004600              ----------->GT1      ------->TEIL                                                      <---------ICU4     <---------CCA1(2)                                          <---------MYB52(2)              -----     <---------GLK1(2)                                         --------->ANAC46            --------->KAN4(2) ------At4g35610                    <-----------GT1            --------->ANAC58     ---------->DOF2 ---MYB52(1)---------->DOF2 <---------ALFIN1                   --------->ANAC58  --------->TOE2(3)   gcttcttgaatctctaaagtataaaaaccctcaccgttttactactatctcatcttaaaactcccaagtaacaaaaatggctatctcaaagcttattcct  17004700                                                                                                <----                                                                                            <--------                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                          <---------RVE1(1)                                                                                         <---------ARR11(3)                                                                                         --------->GLK1(2)                                                                                         <-----------ARR10                                                                                         --------->ARR14(3)                                                                                         <---------ARR14(3)                  ---------->ID1   <-----------RAV1(1)  <---------ARR14(2)               --------->ARR14(2)         <----------DOF2           <---------ZAT6       --------->ARR14(2)               --------->ARR11(3)       <----------DOF2      <---------TOE2(3)          <------ZmHOX2a(1)      >>>>>>>>>>>>>>>>>LFY     <---------ZAT18   <----------DOF2           --------->AGP1      --------->ANAC58    <---------ARR14(2) ->ZmHOX2a(1)  --------------->AtSPL8          --------->LBD16       --------->ANAC58   <------ZmHOX2a(1)   actcttgtgctctttgttttgttctcttttgatgttagtgttgctcatccaggtctaggatttggatggggaagtaatagtcccattggaggatcttttt  17004800                                                                         --------->ANAC58      <----------DOF2                                                   --------->DAG2     <---------ICU4                                         <---------DEAR3(1)   <---------ARR11(1)                                       <---------DREB2C(2)   --------->ARR11(3)                                    <---------YAB1---------->DOF2    -----------  <---------CCA1(2)                         --------->At4g35610   <---------HSFB2a(2)    ============ -------GT1         <-----------GT1--------->ZAT18       ----------->TGA1--------->ANAC58------------ --DOF2     --------->ANAC46       <---------ZAT18       ----------->HVH21         ---------->DOF2   actcaaatctttacccacaattttaccagttctcttgtccacaagctgatgagattgttatgacggtgctcgaaaaagccatagctaaagaaccaagaat  17004900                                                        <-----------GT1                                                      <----------DOF2      <----------DOF2                              <---------ARR11(3)     <---------ICU4                                --------->ARR11(3)   <---------ARR11(3)                              --------->GLK1(2) <------NtERF2                           <---------TOE1(3) <---------MYB59 <----------DOF2 <---------At4g35610                     <---------TOE2(3)--------->ANAC55(2)                    ---- ---->AGL15                --------->ANAC46   ---------->DOF2              <---------DAG2   --------- ==========================================================================MADS_MADS        --------- ----->AGL3       <---------ZAT14       <-----------RAV1(2)--------------->AGL15          <---------TOE1(3)   ggcagcatctttactcagacttcacttccacgactgcttcgttcaggtaaaagtatctttacctatttttgttttccctttatgtgtctcttaagcttaa  17005000          <---------ALFIN1         <---------ZAT14                                          --------->TOE2(3)       --------->ANAC46                                           --------->YAB1     --------->ZAT6                                               <---------------AGL15             <     --------->ANAC46                                            --------->MYB46(3)                 - ----->ZAT6      <---------ANAC46         --------->WOX13(1) <---------ZAT18                  ------>MYB46(1) >TOE2(3)<---------ZAT18         ----------->HVH21    <---------YAB1                          ------>MYB83 >TOE1(3)--------->ZAT14      <---------DEAR3(1)   <---------MYB46(3)    ----------->GT1    <--------   cacttatacactacactctgtgtgtaaacagggctgtgatgcatcaatcttgttggatgatagtgcaaccataagaagtgaaaagaatgctggaccaaac  17005100  Previous    Next  AGI:  At1g44960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68725.1); contains InterPro domain SNARE associated Golgi protein (InterPro:IPR015414) Range:  from: 17001978    to: 17004169    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g44970.1    Description:  peroxidase, putative. Identical to Peroxidase 9 precursor (PER9) [Arabidopsis Thaliana] (GB:Q96512;GB:Q9LPD4); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT2G18150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61096.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 17004557    to: 17006128    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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