Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->AHL20(2)                                                                  <---------ARR14(2)                                                                  --------->ARR11(3)              <---------------AGL15                               <---------ARR11(1)              --------------->AGL15                               ------->TEIL<---------YAB1             =======================================================================================MADS_MADS             <-----------------AGL3                               --------->ARR14(2)             ----------------->AGL3                              <---------ARR14(1)          <---------ANAC46                  <---------TOE2(3)    <---------CCA1(2) ------>ZmHOX2a(1)                      --------->YAB1         <---------ANAC46           <---------- --------->HSFC1(1)                  ------>ZmHOX2a(1)         <---------ANAC58     <---------------AGL15 <---------HSFB2a(2)             <-----------GT1               <---------ANAC58     --------------->AGL15 --------->HSFB2a(2)          <---------ATHB12          <----------DOF2      <---------AHL20(2) <---------HSFC1(1)      >>>>>>>>>>>>>>>>>LFY        <-----------GT1         --------->YAB1     ----- -----At4g35610         --------->GLK1(2)  --------->YAB1   <-----------RAV1(1)     =================   ctcctagaagttgcctctaaaaatagaatccaatgtttcctcttataatgttttataactttctgtcgtatcttgatattaatattctcatatgagtact  16935800                           --------->GLK1(2)                          <---------ARR14(2)                                    --------->HSFB2a(2)                          <---------GLK1(2)                                    <---------LBD16                          --------->ARR11(3)                               <----------DOF2                          <---------ARR11(3)                           --------->ZAT14                 <---------YAB1                                        --------->ZAT18          <-----------GT1 --------->ARR14(2)       <---------------AGL15 ------->TEIL            <--- -----AtSPL8    --------->AHL20(2)                 <----------DOF2     <---------ZAT18           <--- ---->ICU4<---------AHL20(2)                 ----------->GT1           <---------ZAT14 ---------->DOF2 ==================================================================MADS_MADS  <---------ANAC46   <---   gatttttgttatttacatttttattcaagattctgaggctcaagaagtagtaacttttagttgtaaacaatagtgtacttttgtggaactaaagaattag  16935900                                                                                  --------->ALFIN1                                                                                  <---------REM1(1)                                                                                <---------ANAC58                                                                                <---------ANAC46                                                          --------------->AGL15 <---------ANAC58                                                          <---------------AGL15<---------MYB46(3)                                                       --------->GLK1(2)    <------------CBF            <-----------HVH21  ------->TEIL           <---------GLK1(2)------>ZmHOX2a(2)           <-     <---------ANAC46  --------->YAB1                 --------->ARR14(2)   --------->ATHB12      ---- ------ANAC46         --------->AHL20(2)              <---------ARR14(2)  <---------YAB1  <-------MYC3 ------ANAC58         <---------ATHB12     --------->AHL20(2)       <---------ZAT14       ------->MYC3 ------ANAC58     <---------ATHB12        --------->AHL20(2)   <---------YAB1<---------WOX13(1)<-----   cttggagccttggaggtcaaatcaataaatatgcatttttgaaaataaaaaatagggattctcttattagtgatctgtgattgggtgtagcatatgggat  16936000                          --------->AHL20(2)                          --------->AHL20(1)                          <---------AHL20(2)                     <---------YAB1                                                       <---------ALFIN1                     ----------->TBP                                                  --------->ZAT18           <---------ARR11(3)                                                         <---------ZAT18           --------->ARR11(3)             <---------CCA1(2)                        <---------ANAC58       <------ZmHOX2a(1)  <---------AHL20(1)                     ----------->GT1   --------->ALFIN1     <---------TOE1(3)   --------->AHL20(2)                    ---------->DOF2     <---------ANAC58     <---------TOE2(3)   <---------AHL20(2)             <---------AHL20(2)       <---------ANAC58 --------YAB1    <-----------TBP      ----------->RAV1(2) ---------->DOF2        <---------ANAC46 ------->GT1  <----------DOF2 --------->AHL20(2)    --------->AHL20(2)           <---------ANAC58 -------CBF--------->GLK1(2)  <---------AHL20(2)  --------->TOE2(3)          <----------DOF2      <--   tgtgattaaggaaaatcttttttataaataaattaaaaacacctgtctcttacattatttaaaagaaaagtattaatctctttgtgtgtgccccatgcta  16936100                                                                                    --------->ANAC46                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                  <---------ALFIN1                                                                        ----------->TBP                                                                        --------->AHL20(2)                                                                      <---------------AGL15                                      <---------ARR11(3)              --------------->AGL15                                      --------->ARR11(3)             ================================    --------->WRKY45           <----------DOF2       <----------DOF2 <-----------------AGL3  <----------DOF2      <---------AHL20(2)<----------DOF2             ----------------->AGL2 --------DOF2<-------TEIL   <-----------GT1  <---------YAB1          ----------------->AGL3       ---   ctttctttgactatgttcatagtatttttttttcttttgagttctttatgtttctctttccatttttgttctctataaatagaaacacaccattcttctc  16936200                 <---------ICU4            <---------MYB52(1)           --------->TOE2(3)                                                 --------->YAB1           --------------->AGL15                                             <---------ICU4           <---------------AGL15                                   --------->At4g35610          ----------------->AGL3                                   <---------At4g35610          ----------------->AGL2                                   XXXXXXXXXXXXXXXXXXXX>MIR414          <-----------------AGL3                      ---------->DOF2       <---------YAB1        ------>ZmHOX2a(1)                           --------->ANAC58      <---------ICU4 ==========================MADS_MADS                --------->ANAC58      --------->YAB1      ------>ZmHOX2a(1) --->ZmHOX2a(1) --------->ICU4----------->GT1---------->DOF2   <-----------HVH21             --------   ctccaacttcctcccttaattagtatcaaaaatggtgaaaacacttcaaaagacaccaaagagaatgtcatctccatcatcatcatcttcatcatcctca  16936300                                                                                          --------->YAB1                                                                                         <---------ATHB12                                                                                      ===============                                                                                      ------>ZmHOX2a(1)                                                                                      ===============         <---------YAB1                                                          <---------At4g35610       <---------ICU4                                                            <---------GLK1(1)       --------->YAB1                                                            --------->GLK1(1)      <---------YAB1                                                        <------ZmHOX2a(2)      --    --------->YAB1  <------ZmHOX2a(1)                       <-------TEIL    =================HOX2a_HOX2a  <XXXXXXXXXXXXXXXXXXXXMIR419                        --------->ALFIN1     --------->GLK1(1)        -- ->TOE2(3)        <---------TOE2(3)            --------->YAB1             <---------GLK1(1) ---------   tcaacatcatcatcatccataaggatgaagaagtacaagggagtgagaatgagaagttggggttcatgggtttcagagatcagagctcctaatcaaaaga  16936400                                                                                         <---------ICU4           <------MYB83                                                            <---------ZAT2           <------MYB46(1)                                                         --------->At4g35610        <---------ANAC46                                                        =====================        <---------ANAC58                                                        ------>ZmHOX2a(1)    ------>ZmHOX2a(2)                 <------NtERF2                            --------->TOE2(3)   <------ZmHOX2a(2)                 ------>NtERF2              <---------TOE1(2)  <---------At4g35610  --------->ARR14(2)                <---------DEAR3(1)   <---------ALFIN1     ------>ZmHOX2a(2)  <---------ARR11(3)                <------NtERF2       <---------At4g35610  <------ZmHOX2a(2)  --------->ARR11(3)               --------->LBD16      --------->At4g35610 --------->ARR14(2)  --------->GLK1(2)                ------>NtERF2 --------->ANAC46           --------->ARR11(3)  <---------AGP1                   <---------LBD16      --------->ZAT2      <---------ARR14(2)  <---------ARR14(2)              --------->DEAR3(1)    --------->ZAT14     <---------ARR11(3) =========HOX2a_HOX2a            --------->ATERF1(1)--------->ANAC46       <------ZmHOX2a(1)--------- ==========HOX2a_HOX2a    ----------->RAV1(2)    ----------->HVH21     ---------->DOF2   --------->YAB1 ------->ANAC58           --------->At4g35610   --------->SPL7 ======================HOX2a_HOX2a ------->ANAC58        <---------At4g35610    --------->TOE2(2)------>ZmHOX2a(1)===================== ->DOF2 <---------ANAC58  <---------At4g35610 --------->TOE1(2)=====================HOX2a_HOX2a   caaggatctggcttggttcttactcaactgctgaagccgcggctagagcctacgacgcagcactcctatgtcttaaaggatcctcagctaataatctcaa  16936500                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              =======                                                                                              <------                                                                                              -------                                                                                            =========        <------ZmHOX2a(2)                                                                   <--------       --------->ARR11(3)                                                               ----------->RAV1(2)       <---------ARR11(3)                                                               =============      <---------GLK1(1)                             --------->YAB1                      =============      --------->GLK1(1)                   <---------YAB1                                <---------ZAT2   --------->LBD16       --------->YAB1  <---------------------WRI1                     <---------At4g35610 ===============HOX2a_HOX2a             --------->YAB1        --------->ZAT18           --------->ZAT2 >TOE2(3)------>ZmHOX2a(2)              ----------->GT1     <-----------HVH21           --------->At4g35610 ==============HOX2a_HOX2a        <<<<<<<<<<<<<<<<<LFY   <---------bZIP60(2) ---------->DOF2=========   cttcccagagatctcaacttctctctaccatattatcaacaatggtgataacaacaatgacatgtcccctaagtctatacaaagagtagcagctgcagct  16936600               =============HOX2a_HOX2a               --------->HSFC1(2)               <---------HSFB2a(1)      ----------->RAV1(1)   ------>NtERF2 -------->At4g35610 ---------ZAT2 <---------HSFC1(2) -------->ZAT2 --------->HSFB2a(1)                                      ------>ZmHOX2a(2) ---------At4g35610                                                    --------->GLK1(1) ----->At4g35610                                                       <------ZmHOX2a(2) ------At4g35610 ------>ZmHOX2a(1)                                    <---------ARR11(3) -------RAV1(1)------>ZmHOX2a(2)                                      <---------AGP1 ---ZAT2      ==============HOX2a_HOX2a                               <---------ARR14(2) ---->RAV1(2) <------ZmHOX2a(2)                                       <---------ARR14(3) -->At4g35610--------->AGP1                                    <---------At4g35610 =================RAV    <---------ICU4                  ------>ZmHOX2a(1)    --------->YAB1 ---At4g35610--------->ARR14(2)                          =====================HOX2a_HOX2a -->ZAT2     <---------ARR14(2)                          ======================HOX2a_HOX2a =======RAV  <---------ARR11(3)                     <----------DOF2   --------->ARR14(2)      <------ ---RAV1(2)  <---------GLK1(2)                     <---------ANAC58   --------->ARR11(3)     -------- =================RAV    --------->YAB1            <---------ANAC58   --------->ARR14(3)    <-------- =======RAV  --------->ARR11(3)           <---------At4g35610  --------->At4g35610         --------->bZIP60(2) =================RAV------>ZmHOX2a(1)    --------->At4g35610  ----------->RAV1(2)         --------->ANAC46   gctgctgccaacacagatccttcctcatcatcagtctctacttcatctccattgctttcctctccatctgaagatctctatgatgttgtctccatgtcac  16936700  Previous    Next  AGI:  At1g44830.1    Description:  AP2 domain-containing transcription factor TINY, putative. Identical to Ethylene-responsive transcription factor ERF014 (ERF014) [Arabidopsis Thaliana] (GB:Q9LPE8;GB:Q681W4); similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT1G21910.1); similar to RAP2-like protein [Populus trichocarpa] (GB:ABQ63000.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 16936232    to: 16936951    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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