Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ATHB12                                                                    -------->HAHB4                                                                    <---------ICU4                                                                    <--------ATHB1                                                                    --------->ATHB51                                                                    --------->ATHB12                                                                   <---------ATHB51                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                   --------->ICU4        ----------->GT1                            <---------AHL20(2)                     <---------YAB1       <---------TOE2(3)                           --------->ICU4                        --------->YAB1--------->TOE2(3)                           --------->AHL20(2)                 --------->YAB1  --------->YAB1           <---------GLK1(2)--------->ATHB12     --------->YAB1--------->AHL20(2)       <---------TOE1(3) <-------TEIL           --------->ICU4--------->ATHB12        --------->AHL20(2)       ---------->DOF2 --------P --------->ARR11(3)         --------->ATHB51     --------->YAB1     <---------ICU4 -------->GT1  <---------YAB1        <---------YAB1     --------->TOE2(3)    --------->ICU4 ----->DAG2<---------ARR11(3)        --------->ICU4     <----------DOF2      <---------ATHB12   aggttgatttttagattttcaatgcaatatttattagttattattgatgaattataaactttaataaaaataattgaaaatcattagtttaaagttataa  16925600                                            <---------YAB1     --------->AHL20(2)              <----------DOF2  --------->YAB1           <---------AHL20(2)      --------->TOE1(3)   ------>ZmHOX2a(1)  --------->AHL20(2)       --------->AHL20(2)      --------->TOE2(3)  --------->TOE2(3) --------->ICU4    --------->AHL20(2)--------->TOE2(3)   <---------AHL20(1)                         -   gaaattataaaatacaaaaaataaaacatttaaaatcaactttaatatgattaccttaatatatgtgtttttcctaaacaatcgaacaaaaatgaacaga  16925700                                  <--------ATHB1                                  <---------AHL20(2)                                  --------->YAB1                                  <---------ICU4                                  --------->AHL20(2)                                  <---------AHL20(1)                                 <---------YAB1                               --------->YAB1                                               ---------                              <---------ATHB51                                              <--------                         --------->ANAC46                                              --------->AHL20(1)                         --------->ANAC58                                              <---------AHL20(2)                         --------->ANAC58                                              <---------AHL20(1)                        ------->MYC2                                                   --------->AHL20(2)                        ------->MYC3    <-----------GT1                               <---------AHL20(2)                --------->ANAC55(1)  --------->AHL20(2)                               --------->AHL20(2)        <---------AHL20(2)    <---------ATHB12                                    <---------AHL20(1)        --------->AHL20(2)    --------->ICU4<<<<<<<<<TBF1                         --------->AHL20(1)      <---------AHL20(2)<-------MYC2 <---------AHL20(2)        ------->MYC3       --------->AHL20(2)      --------->AHL20(2)<-------MYC3 <---------ICU4            <-------MYC3       <---------AHL20(2)- ---------->GT1 --------->ANAC46 --------->ICU4   ------>ZmHOX2a(1)        ----------->GT1 --------->AHL20(2)   gggagtatatatatatacacataacacatgcaataataattttttcttcttcctgttttcttacacatgtttttagtttgttattttattaaattaactg  16925800                                   >>>>>>>>>TBF1                             <---------TOE2(3) >MYB52(1)                  ---------->DOF2 ---GT1                    --------->AHL20(2)                                          <---------GLK1(2) -------->YAB1             <---------AHL20(2)            <-----------GT1   ---------->DOF2      -----   aaccataagaagacaatttcaagacaaaattaaagaagaagaagttatagatagcaattttacccaaaaaaaaaaaaaaaagagttatagattagcaaac  16925900                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             <-------        <------MYB83                                                                         --------        <------MYB46(1)                                                                      <-------      <--------P                                                                             --------     <---------ANAC58                                                                        <-------     <-------GAMYB                                  <-----------RAV1(1)                      <-------     <---------ANAC58                              <------------AtMYB77                      --------    <------MYB83 <----------DOF2                 --------->MYB52(1)                  ----------->GT1    <------MYB46(1)                              ------>MYB46(1)                     <---------ZAT6    <---------MYB46(3)      ---------->DOF2      ------>MYB83                       <---------TOE1(3)   --------->MYB59        --------->ANAC46     <---------MYB59                <---------------AGL15 ---->YAB1   ----------->HVH21                --------->ANAC46     <-----------GT1 *TSS    <---------   aaaatttggttgggcctgactttaatacacaaaagcccaaactcttaaacccaactgttgttctgttcttcaccttcttcccatctagggttattacgta  16926000                                                                                                  ---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------     --------->ZAT14                                                --------->HSFC1(2)        <------ ---MYB59                                                       --------->ANAC46              ------- ->ANAC58                                               <---------At4g35610                   ------- ->ANAC58                                               --------->At4g35610               --------->MYB46(3) --ANAC55(1)                                       --------->KAN4(2)<---------HSFC1(2)   <------ZmHOX2a(2) ->ANAC55(2)                                      <---------HSFC1(2)<---------HSFB2a(1)  --------->CCA1(2) --ANAC58                                         <---------HSFB2a(1)                   --------->ARR11(3) ->ANAC46                                         --------->HSFC1(2)--------->HSFB2a(1) --------->AGP1 --ANAC55(2)                                      --------->HSFB2a(1)                   <---------ARR11(3) --ANAC58                                    <---------------------WRI1       ------->GAMYB  -------- ->ANAC55(1)                               --------->ARR14(2)   --------->ANAC58        <---------ARR14(2) --GT1                                     <---------ARR14(2)   --------->ANAC58        --------->ARR14(2)   acttctctgttctctctcactctctctgttcttcatcacaccgagaattcgaaaattccgatgaacaagaaacttctcaaccctcttgaagatccaccaa  16926100 ---->GAMYB ----->MYB46(3) ->MYB46(1) ->MYB83 --->P---------->DOF2 --->MYB52(1) --->MYB55(1) ---MYB111(2) -->DEAR3(1) ---MYB46(2)                                                              <<<<<<<<<TBF1 ---MYB111(1)                                              <---------ARR11(3) ---MYB55(2)       --------->DEAR3(1)                      --------->ARR11(3) ---ALFIN1         <---------ETT(2)                        <---------ARR14(2) -->AtMYB61        <---------DEAR3(1)  <------ZmHOX2a(1)   --------->ARR14(2)<---------At4g35610 -->MYB46(3)    --------->O2        <-----------RAV1(2)   <---------CCA1(2)  --------->At4g35610 ->MYB46(3)     <---------O2  --------->GLK1(1)   ---------->DOF2      <<<<<<<<<TBF1>>>>>>>>>TBF1 ---   ccgcttcttcaagcgaagacgtcgacgaagagatttcatcaggagaagatgaaaaagaacatatctccaattcttcttcttctgaagaagaaaacgaact  16926200           --------->ANAC58           --------->ANAC58           --------->ANAC46         <---------ALFIN1        --------->ZAT14    ------>ZmHOX2a(2)                                         ------>ZmHOX2a(2)    =================================HOX2a_HOX2a             <---------At4g35610   <------ZmHOX2a(2)                                        --------->ARR14(2)   ==================================HOX2a_HOX2a            <---------ARR11(3)   --------->GLK1(1)                                     --------->HSFB2a(2)   <---------GLK1(1)                                     <---------HSFB2a(2)  <---------AGP1  --------->TOE2(3)    <---------ATERF1(1)  <---------AGP1                   --------  <---------ARR11(3)          ------>ZmHOX2a(1)         <---------LBD16                     <--------  --------->ARR11(3)      <-----------GT1            <---------GLK1(2)                --------->ANAC58  <-----------ARR10    <---------GLK1(2)    <---------ALFIN1<---------ARR14(2)        --------->ANAC58 ------->DOF2     --------->TOE1(3) --------->DEAR3(1)--------->GLK1(2)             ---------->DOF2<-   caaagatctctccactcaaaccctaaattctccttccaccgaggctccaactctcgattctggatctgagacaaattccgactcagataagccaatcgtc  16926300                    <---------------AtSPL3                    <---------------AtSPL8            >>>>>>>>>TBF1    <-----------HVH21     --------->ICU4        <---------ZAT2                 ---------->DOF2      < ->YAB1 --------->At4g35610                     <---------STY1(2)       <------ZmHOX2a(1)          -- -ATHB12<---------At4g35610                     --------->STY1(2)   ---------->DOF2              <--- ----------GT1 ---------->DOF2<-------TEIL    --------->ZAT18   --------->At4g35610              <---   ttaaccagtcagaagaagaaagaaggtactgattcatcagggacgaagcgagctagtgaaggaactagctcaaaggacatcaaaagagctaagaaagttt  16926400                                                                                   <---------At4g35610       <---------YAB1                                                              <---------ZAT2    ----------->TGA1                                              XXXXXXXXXXXXXXXXXXXX>MIR864-5P    ----------->HVH21                               ------>ZmHOX2a(2)              --------->At4g35610  <---------At4g35610                              --------->GLK1(1)            ---------->DOF2  --------->At4g35610                              <------ZmHOX2a(2)      --------->ATHB12 ------ZmHOX2a(1)                                  <---------GLK1(1)    <---------WOX13(1) ------->LBD16   <---------AHL20(2)               <---------ARR11(3)  --------->ATHB12 ----------->HVH21 ------LBD16     <---------AHL20(1)               --------->ARR11(3) <---------YAB1--------->ZAT2 --------RAV1(2) --------->AHL20(2)   ---------->DOF2          <XXXXXXXXXXXXXXXXXXXXXMIR864-3P <-----   caggagatgacgataacaaaaaatttcagagtttatggactaaagaagatgagatctctctgttacaaggtatgattgatttcaaagctgagacaggtac  16926500  Previous    Next  AGI:  At1g44810.1    Description:  transcription regulator. similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT4G00250.1); similar to unknown [Populus trichocarpa] (GB:ABK93310.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 16925983    to: 16927261    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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