Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------YAB1                                                                    <------        <----------DOF2                                                                       <------       --------->HSFC1(2)                                                                <---------KAN4(1)       <---------HSFC1(2)                                                              <---------GLK1(2)       <---------HSFB2a(1)                                                           --------->LBD16       --------->HSFB2a(1)                                                          --------->HSFB2a(2)     ------>MYB46(1)                                                                <---------HSFB2a(2)     ------>MYB83                                                              <---------HSFC1(2)   <---------MYB59 ---------->DOF2                                             --------->HSFC1(2)  --------->DEAR3(2)       ---------->DOF2              --------->ZAT6         <---------HSFB2a(1) ------->TEIL   --------->YAB1               ---------->DOF2                   --------->HSFB2a(1)<--   atgaaccgaactttctaattgtaaagcagaaaagatggttttctaatgaaagagacttactctaatattccaagagcaagaagcctccagaatattgcta  16919000                                             --------->ANAC55(2)                                             <---------ANAC55(2)                                       <---------AHL20(2)                                       --------->AHL20(2)                                   <--------HAHB4                                   --------->ATHB51                                   <---------ICU4                                   --------->YAB1                       ------->TEIL                                   -------->ATHB1                   ------->TEIL                                   --------->AHL20(2)               <---------------AtSPL8                                  <---------YAB1               <---------AtLEC2                                  --------->ICU4--------->ARR14(2) <---------AtLEC2 ---ANAC58           --------->AtLEC2<---------YAB1     <---------ARR11(1) ---ANAC58 <---------MYB59        <---------ATHB51      <-----------ARR10         ----------->GT1 -------ZAT6         ------>ZmHOX2a(1)--------->YAB1   <---------CCA1(2)<-------TEIL   gtgtcatcttgggcctaattttcctgcaaacatacaattattaaaataagtattctcatatctatgcatgcatgtacatagatgtggataatatgtgttt  16919100                                                                                      --------->AtLEC2                                                                                      --------->ANAC58                                                                               <---------ATHB12                --------->TOE1(2)                        --------->RAP2.6(3) --------->MYB52(1)          --------->HSFB2a(2)                           --------->MYB52(1)--------->ANAC58          <---------HSFB2a(2)                     --------->ANAC58        <<<<<<<<<<<<<<<<<LFY     ------->TEIL                                 --------->ANAC46    --------->ANAC58--------->ANAC46    <-----------GT1                ----------->HVH21   ----------->HVH21  --------->ANAC58 --------->ICU4  <---------REM1(1)      --------->MYB52(1)       --------->ANAC58    --------->ANAC58--------->ANAC58 <---------------AtSPL3 ---------->DOF2   ------->GAMYB----------->TGA1   >>>>>>>>>>>>>>>>>LFY   gtagttgtacctctcgaacatgagagcaaagggagccatgacaaccgtggctacgacatgacggtatgtagcaagaacccaatggtccatgccatgtttg  16919200                        --------->RAP2.6(3)                                                       <--                        <---------ANAC58                     --------->RAP2.6(3)                 <---                        <---------ANAC58  --------------------->WRI1      <-----------GT1       <----                   ------->TEIL         --------->ZAT14     <---------ARR14(2)                 <-----                   <-------TEIL --------->ANAC58  <---------ICU4        <-----------GT1  <----------DOF2               <---------------AtSPL8   <---------ZAT14     --------->ARR14(2)          <---------DAG2             --------->ICU4     --------->ANAC58 --------->ICU4   <----------DOF2    <---------ALFIN1   aacgagaccatggtgatgatgtacatgcctgcatacccaaattgcagtgaaattatcgccaatatcggcttaattttctccatgcttccacctttcatct  16919300        <---------ATHB12    <---------------AGL15    --------------->AGL15   <---------ANAC55(2)   --------->ANAC55(2) <-----------GT1                                              <---------ALFIN1                  <---- -------ICU4                 <---------ARR11(3)         --------->ZAT6                          <---- ------YAB1                 <---------CCA1(2)         <-----------GT1                           <---- ------DOF2         --------->ZAT6                <---------AHL20(1)                           <----- ----ICU4         <-----------GT1                 --------->AHL20(1)      <----------DOF2      ------   ttattacttaatcaagaatataacactactatatctaagtttatgtgtgtaatatataactctaccactctcttctctttatattgatgagagttgtttg  16919400                                          ------>MYB46(1)                                          ------>MYB83                                        <---------MYB59      <---------YAB1       ----------->ARR10             *TSS --------->MYB52(1)<-----------TBP --MYB46(1)                     --------->ANAC58          --------------->AGL15 -----ANAC46                    --------->ANAC58          <---------------AGL15                    -- --MYB83  --------->CCA1(2)     ----------->GT1           <----------DOF2                          <- ----MYB46(3)                 <-----------RAV1(2)--------->At4g35610                 --------->AHL20(2) --->MYB46(2)              <---------TOE2(3)     <---------At4g35610      ---------->DOF2--------->AHL20(2)   gtgagtgatgagataagctctatttgtttgaggcaggcaaaacctaatgggagatgactcctttttatagtcgagcaaaagttagaataaaaaaaataca  16919500                                               --------->AHL20(2)                                --------->ARR14(2)                                <---------ARR11(1)                                <---------ARR14(2)                                ------->TEIL--------->ARR11(3)                               <---------ARR14(1)                             <---------ANAC55(2)                             --------->ANAC46  <---------AHL20(2)                             --------->ANAC55(2)                       <---------ANAC55(2)  --------->AHL20(1)              --------->CCA1(2)  <---------ICU4   --------->YAB1           <---------AHL20(1)             --------->ARR11(3) <---------YAB1    <--------ATHB1           <---------ARR11(3)      <----------DOF2 --------->ICU4   <---------ATHB12    --------->HSFB2a(2)         --------------->AGL15 --------->MYB52(1) ------->YAB1     <---------ATHB51 <----------DOF2             <-----------GT1<---------YAB1 --------ICU4 ------------>CBF <---------CCA1(2)           <---------ZAT6  <---------ARR11(3)   ctcattattttgttaactcaataatacgtctacgtatcttttggaatattttaatgaactagtgtttacactttagagatatgaataagttaacagaaaa  16919600                                         <---------CCA1(2)                                     <-----                    <----------DOF2   --------->At4g35610                         <----------DOF2                 <---------AHL20(2)   <---------At4g35610                         <---------DAG2                 <-----------GT1------->TEIL    --------->AHL20(2)        <---------YAB1   ----------          ----------->GT1      <---------AtLEC2 <---------AHL20(2)      ----------->GT1 <----------DOF2   atatgtcttacatagttatttacttttacatatgcatgtcagcatatcatttatataagaattcattttggaatttgttattagctttttcttttccctt  16919700                                                                                     <-------MYC4                                                                                     ------->MYC4                                                                                     <-------MYC2                                                                                     ------->MYC3                                                                                     <-------MYC3                                                                                     ------->MYC2                                                                                    --------->O2                                     --------->ARR14(2)                             --------->TGA1a                                     <---------ARR14(2)                             <---------TGA1a                                     <---------ARR11(1)                             =================                                     --------->GLK1(2)                              <---------O2                                     --------->ARR11(3)                             <---------ANAC55(2)                             <---------ICU4                                  <---------ANAC58                            <---------YAB1                                   --------->ANAC46                      <---------AHL20(2)                               <---------AHL20(2)        <---                     --------->AHL20(1)                           <---------AHL20(2)--------->ANAC55(2)                     <---------AHL20(1)                         <----------DOF2----------->HVH21-----                     --------->AHL20(2)                 <---------ANAC46     <---------ANAC55(2)<----                    --------->YAB1   <---------ARR11(3) <---------ANAC58     <---------ANAC58   ----- -----DOF2     ----------->GT1      <---------CCA1(2)   <---------ANAC58     --------->ANAC55(2)<---- >ID1   ---------->DOF2   --------->YAB1          <-------TEIL  ==============================bZIP_DOF   tagacgatttcaaagtagagaaatataatcaaaattgcaaatcttgtatacatacatggtgtgattcttttatttcaatgcgtaacacgtgttcgcatta  16919800  <---------TOE2(3)                               --------->DAG2 ---------->DOF2                                <--------P ===========bZIP_DOF                       <------MYB83    <---------ANAC46 ------YAB1                               --------->MYB111(1)                               <-------- ---->AHL20(1)                            --------->MYB111(2)                        <-----------GT1 -----AHL20(1)                            --------->MYB46(2)                     <---------DAG2 ---->AHL20(2)                           <--------P        <---------ANAC58      <----------DOF2 -----AHL20(2)               --------->YAB1<------MYB46(1) <---------ANAC58   <-----------GT1   tattaaagttgatatatcacatagttttgtatgatatcaagtagtaggtggtaaggtgattgtgtgtgcatacacatttgtaactttttacaatatagta  16919900  Previous    Next  AGI:  At1g44800.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT4G08300.1); similar to nodulin family protein [Gossypium hirsutum] (GB:ABS52574.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 16916449    to: 16919437    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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