Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ATHB12                             ----------->GT1                  --------->ANAC55(1)  --------->ATHB51                  <---------ANAC55(2)  --------->AHL20(2)           <-----------GT1                  --------->ANAC55(2)  <---------AHL20(2)        <---------ICU4                 <----                  --------->ANAC58    <---------AHL20(2)     <---------AHL20(2)                 -----        <---------AHL20(2)   --------->ANAC58               <---------AHL20(2)                  -----       <---------AHL20(2)    --------->ANAC46               --------->AHL20(2)                 <-----       --------->AHL20(2)    --------->ANAC58          <---------GLK1(2)               <---------ANAC58  --------->LBD16 --------->ANAC46 <---------AHL20(2)  --------->ARR11(3)              <---------ANAC46 ----AHL20(2)     --------->ANAC58 --------->AHL20(2)  <---------ARR11(3)              <---------ANAC58   tatcccgaatttaatattacacgtattaaacaggcaaaaaattatttgaacacattagatttttaaatttttacaaaattttgaacatggcatgaaaatc  16833100                                                                                 --------->ARR11(3)                                                                       ----------->HVH21                                                                       --------->WRKY12        ------                                                                   <-------TEIL  <---------ARR11(3)                                                                  --------->ARR14(1)          -------                                                                 --------->ARR11(1)           -------                                                                 <---------ARR14(2)           -------                                                                 --------->ARR14(2)        <------ZmHOX2a(2)                                                                 <---------GLK1(2)        --------->ARR11(3) -----ICU4                                                      <---------HSFC1(2)--------->GLK1(1) ---->ATHB12                                                    --------->HSFC1(2)<---------GLK1(1) --->ATHB1                                                      --------->HSFB2a(1)       <---------ARR11(3) ----YAB1  ----------->HVH21                                    <---------HSFB2a(1)  <---------ANAC46   attggagatagccctgatgttttcaactacaagttttttttttttttttttttgaaatcaactagaagattcgttgacaccaagatatcgtagatcaccc  16833200                                                           <---------YAB1                                                           <---------AHL20(2)                                                         --------->YAB1                                                       <-----------TBP             <---------YAB1                                                     --------->AHL20(2)          --------->YAB1                                                     <---------AHL20(2)    --------->ANAC46                                                <---------AHL20(2)         --------->ANAC58      <---------YAB1                      <---------AHL20(2)               --------->ANAC58 --------- ------>CBF                  <---------YAB1<---------AHL20(2)             <---------ZAT18  <---------ARR14(2) -->ANAC58               ------->TEIL     <---------AHL20(1)       <---------ARR11(3)      --------->ARR14(2) -->ANAC46        --------->AHL20(2)      --------->AHL20(2)--------->YAB1--------->ZAT18  <---------GLK1(2) -->ANAC58    <---------TOE2(3)    <---------YAB1<---------AHL20(2)--------->ARR11(3)  ------>ZmHOX2a(2)   aattcgatatgcttataagattatatgaattttgaatacgataatttttttttatttttttataattaagaacttgcacgctaagatgatcgagatttgc  16833300                                      <---------ICU4                                      --------->AHL20(2)                                      <--------ATHB1                                      --------->ATHB51                                      --------->YAB1                              <---------ZAT6                            <---------At5g28300                           <-----------GT1                        <---------AHL20(2)                       --------->ATHB51                          --------->AHL20(2)                ---------->DOF2      <---------ATHB51      --------->ARR11(3)       ------>NtERF2   --------->AHL20(2)                  <---------ARR11(3)      <----------ID1--------->YAB1   <---------ATHB12    --------->DAG2                         <---- >CCA1(2)      --------->AHL20(2)------------>CBF      ---------->DOF2                         <-----   caactacgacgacaaaataaaagaataatttactgttcaataatttctctctcgcagaaaaggtctataaaatagcagtctcactctcttgagttatata  16833400                                                         <-----------TGA1                                                         <-----------HVH21                                                        <---------TGA2(1)                                                        --------->ANAC55(2)                                                        --------->bZIP60(1)                                                        --------->O2                                                        <---------O2                                                        --------->TGA2(1)                                                        <---------ANAC55(2)                                                        <<<<<<<<<<HY5                                                        <---------bZIP60(1)                  <-------                                                        >>>>>>>>>>HY5                       <--------                        <-----------GT1                --------->RAP2.6(3)                  <--------                     --------->KAN4(2)                 ----------->STF1                  <---------ANAC46               <-------MYC2                            <-----------STF1                  <---------ANAC58               ------->MYC2                           <---------TGA2(2)                  <---------ANAC58               ------->MYC3                          ----------->TGA1                 --------->GLK1(2)               <-------MYC3                       <-------TEIL                       <---------ARR14(2)              --------->O2                   <---------AHL20(2)                      <---------GLK1(2)              <---------ANAC46               --------->AHL20(2)                      --------->ARR14(2)              <---------ANAC55(2)            ----------->TBP                        --------->HSFB2a(1)              --------->ANAC55(2)          --------->AHL20(2)                       <---------HSFB2a(1)              <---------TGA1a              ----------->TBP--------->TGA2(2)    --------->AtLEC2------ ---TEIL      --------->TGA1a       <-----------GT1  ----------->HVH21    ------>ZmHOX2a(2)<---------MYB52(1) ------GT1    <---------O2        <-----------GT1<-----------GT1         <---------GLK1(1)<----------   catctcggtctcattcacgtgtttattctccctatttttcaccatatatatatacatgacgtcatccatgtttcgatctccttgcaagattccgtcggtg  16833500                                                <-----------HVH21                                                --------->TOE2(3)                                                <-----------TGA1                                               <---------bZIP60(1)                                        <---------ANAC46                                 <---------At4g35610                                       <-------TEIL                                      --------->At4g35610                                    <---------HSFB2a(1)                                <---------WRKY45                                    --------->At4g35610                                <---------WRKY12                                    --------->HSFC1(2)                                 <---------WRKY38(1) --DEAR3(2)                         <---------HSFC1(2)                                 <---------ZAT18 -At1g77200                         <---------ZAT2            <----------DOF2     <---------ANAC58  < -DEAR3(1)          <---------ANAC46<---------At4g35610 <---------WRKY12   <---------ZAT14         <- ----->HVH21       <-------TEIL     --------->ZAT2      <---------WRKY38(1)--------->ZAT14     ------ -HVH21    ---------->DOF2    ---------->DOF2  --------->bZIP60(1) ---------->DOF2<---------ANAC58 --   aaaggttttgagcaaaagagctacgtaggccttaaagcagcttcgtataacgtcagagtcaactcttttaaaagcagtgaagttgctagtcaactccaaa  16833600                                                    --------->LBD16                                                   <---------ANAC46                                                   --------->LBD16                                                  <-----------------------TaNAC69(2)                                           ------>NtERF2                                          --------->DEAR3(1)                                         <------NtERF2                                         --------->ERF1                  --------->ATHB12                                         --------->ATERF1(1)            <---------YAB1                                        <---------ATERF1(1)       --------->REM1(1)                                        ------>NtERF2             <---------ALFIN1                                        <---------RAP2.3(1)     ----------->RAV1(1)                                       --------->DEAR3(1)       --------->RAP2.6(2)                                       <---------DEAR3(1)       <---------ALFIN1                                      --------->RAP2.3(1)     ------>MYB83 <---------WOX13(1) ------ZmHOX2a(2)      <---------MYB52(1)--------->RAP2.3(1)  ------>MYB46(1) --------ARR11(3)      --------->At5g28300--------->RAP2.3(3)--------->ANAC58 ---->DOF2            ----------->GT1 --------->ATERF1(1)    --------->ANAC46 ------->ARR11(3)   <---------ANAC46 <---------ATERF1(1)     --------->ANAC58   agatcgactcgaccttgatatggccggtaaatgctctcgaggcgcctccagtcccgagtaaaccagccacacctctgattgatcagcctcttgtaagtaa  16833700                                                                                             <-------                                                                                             <-------                                    <----------DOF2                          --------->WOX13(1)                            --------->TOE1(3)                          --------->MYB52(2)    <-------                            --------->TOE2(3)         <----------DOF2<---------MYB52(1)      --------      <---------AHL20(2)    <---------MYB59    <----------DOF2  <----------DOF2            <---------ZAT14   acacttattttaaaaccaaaatgtttagaacctaaacacttttgtttttcttttggctttgaacttcttttgttagtttcaatctaatgtgagttaagtg  16833800                      ------->PIF5                      <-------PIF5                     --------->ANAC46                     --------->ANAC58                     ======================bZIP_DOF                     =================MYC_MYB                     ==============================MYC_MYB                     --------->O2                     <---------O2                     --------->ANAC58                     --------->bZIP60(2)                    --------->SPL7                 --------->ANAC58                 --------->ANAC58                ------>NtERF2              <------NtERF2              --------->ATERF1(1)             <---------ATERF1(1)          ------>MYB46(1)           --------->DEAR3(2)             ------>MYB83          --------->At4g35610             -------->P     --------->ZAT2<---------ALFIN1      <---------ALFIN1     <---------At4g35610   --------->MYB52(1)     --------->At4g35610   --------->ARR14(2)      <---------ZAT2  <---------At4g35610<---------TGA1a    <---------SPL7  --------->At4g35610--------->TGA1a --------->ZAT18          --------->ANAC46  ------>ZmHOX2a(1) --ANAC46 <---------At4g35610        <---------ZAT18  ------>NtERF2           ----------->RAV1(2) --ANAC55(2) ------>NtERF2 <---------ARR14(2)      --------->ZAT2       <---------ARR11(3) --ANAC55(1)----------->HVH21   ---------->DOF2    <---------At4g35610  --------->ARR11(3)  <-------- ->ANAC55(2)--------->DEAR3(1)------->GAMYB        --------->At4g35610 <---------CCA1(2)    ---------   tttcagcagctaagccgacgcgcacgtcgtaaccgaaagtgccctacccagagagctgccttccaagagactaatatctctcctgcaaatttcatatacc  16833900                                                                --------->ICU4                                                          --------->YAB1                                                       --------->YAB1                                                       <---------ICU4                               <                                                      --------->ICU4                                <                                                    <---------ICU4                                  -                                                   --------->ICU4                                   -                  --------->MYB52(2)          ----------->GT1 --------->YAB1           --------->ANAC58                <--------P               <-----------GT1 <---------YAB1                --------->ANAC46             <---------TOE2(3)       <------ZmHOX2a(1)<---------YAB1       <---------MYB46(3)  <----- -ARR14(2)   <---------TOE2(2)     <---------TOE2(3)--------->YAB1     <---------YAB1  --------->ANAC58 >ARR14(2)--------->ANAC46    <---------AHL20(2)   <---------YAB1--------->ATHB12  <----------DOF2  <   ctctcttcattcacgaaggttagtttgagtttttatttaggattaacttggttataattatcaaaaatgatttatagttgttgtgctttaagccaatgtg  16834000  Previous    Next  AGI:  At1g44318.1    Description:  HEMB2; porphobilinogen synthase. similar to HEMB1 [Arabidopsis thaliana] (TAIR:AT1G69740.2); similar to HEMB1, porphobilinogen synthase [Arabidopsis thaliana] (TAIR:AT1G69740.1); similar to aminolevulinate dehydratase [Raphanus sativus] (GB:AAK15323.1); contains InterPro domain Tetrapyrrole biosynthesis, porphobilinogen synthase; (InterPro:IPR001731); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 16833456    to: 16836356    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version