Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ANAC58          <---------HSFB2a(2)                                                                --------->ANAC58       --------->GLK1(2)                                                                --------->ANAC46      --------->GLK1(1)                            <----------DOF2                   <---------ALFIN1        --------->ARR14(2)                            =====================================bZIP_DOF             <---------ARR14(2)                         <---------ALFIN1                     --------->MYB52(1)   --------->LBD16                    <---------ARR14(2)                       --------->MYB46(3)    <---------TOE1(2)               --------->ANAC58                           <---------WRKY18(1)     --------->LBD16   <               --------->ANAC58                          ----------->HVH21        --------->ANAC55(2)  ------>ZmHOX2a(2) --------->ARR14(2)                 <---------TGA1a            <---------LBD16  <- ------DOF2   --------->WOX13(1)    <---------ARR14(2) <---------ANAC58          <---------LBD16<---- ->ARR11(3)  ---------->DOF2<---------DAG2 --------->ANAC46--------->PCF2  <------ZmHOX2a(1) <------ZmHOX2a(1) --ARR11(3) --------->WRKY18(1) <---------At4g35610    <---------ANAC58 <------ZmHOX2a(1) --------->HSFB2a(2)   ttgatccatctttcgtcaagcagttctccactttagccgatttcgacacaacttctgacttgacccacggtagaggaggaagtcccgggattctaggaat  16823800                   --------->LBD16                  --------->ANAC58                  --------->LBD16                  <------NtERF2              <------MYB83             --------->MYB59            <--------P          <------MYB46(1)                                       <------MYB46(1)          <------MYB83                                         --------->MYB59         <---------AtMYB61                                     --------->MYB46(2)         --------->MYB111(2)                               --------->ICU4         --------->MYB59                                   <---------HSFB2a(1)         --------->MYB46(2)                           --------->ANAC46                        -------         --------->MYB111(1)                         ------>ZmHOX2a(1)               ----------->ARR10         --------->MYB52(2)          --------->LBD16 <---------LBD16            <---------ANAC46       <---------MYB52(1)           <---------LBD16  --------->LBD16          <------MYB46(1) <------     <---------MYB46(3)        --------->ANAC58  --------->ARR14(2)           <---------MYB46(3)     <------MYB83 --------->ANAC58  --------->LBD16 --------->TOE1(2)         <------MYB83<---------LBD16     <------MYB46(1)       --------->MYB59   --------->MYB59--------->ATHB12 --------->ALFIN1 ------- ---------LBD16  <---------LBD16   <---------LBD16<---------HSFB2a(1)   <---------LBD16  <---------LBD16 --------LBD16<------MYB46(1)  --------->ANAC58  <---------ARR14(2)    <---------LBD16<---------HSFB2a(1) -----HSFB2a(1)<---------PCF2<------ZmHOX2a(1) <------ZmHOX2a(1)<------MYB83 <---------AtMYB61<------   gctcgggaggttaggtaggcccggaatgttaggaagccccgggatgttaggaatcctcggaatgtttggtatttcagggatggtgggaagactcgggata  16823900        <---------LBD16   ------>ZmHOX2a(1)                      <--------P       <---------LBD16    --------->LBD16                       <---------MYB52(1)    <---------HSFB2a(1)  --------->TOE1(2)                     --------->LBD16   ----------->ARR10     <---------LBD16                      --------->LBD16 -->ARR14(2)         <---------GLK1(1) --------->ANAC58      <---------LBD16 ---ARR11(3)         --------->GLK1(1) --------->ANAC58  --------->GLK1(1)     <------NtERF2<-------- -->ARR11(3)  --------->ATHB12       <------ZmHOX2a(1)   <---------GLK1(1)   <---------DEAR3(1) ---ARR14(2) --------->ICU4        --------->MYB59     <------ZmHOX2a(1)  <---------LBD16 <-------TEIL   ttgggaagactcgggatgatgggaattcctgggatgttaggaagccatgggatgctaggaaaccccggtagcaatacggggggcgatagaggtgctttag  16824000                                                                       --------->ATERF1(1)                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                      ------>NtERF2                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                                     ------>NtERF2                                                                    <---------ANAC46                                                                    <---------RAP2.6(2)                                                                    <---------RAP2.3(2)                                                                    <---------RAP2.3(3)                                                                    --------->ATERF1(2)                                                                    <---------ATERF1(2)                           <---------ATHB12                         <---------ANAC58                          ------>MYB83                              <---------DEAR3(1)                          ------>MYB46(1)                           <---------ANAC58                       <---------ATHB12                            --------->RAP2.6(3)                       --------->MYB46(3)                          --------->ATERF1(1)                       <---------MYB55(2)                          <------NtERF2                      --------->ANAC58                            <---------ERF1                      ------>MYB46(1)                             <---------ATERF1(1)                      --------->ANAC58                      <---------ANAC46                      ------>MYB83                     <----------DOF2<---------ATERF1(1)                      -------->P              <------NtERF2 <---------ANAC58                 --------->ANAC58            ------>NtERF2  <---------ANAC58            --------------->AtSPL3           <---------RAP2.3(1) --------->ALFIN1        ------>NtERF2            --------------->AtSPL8          <---------RAP2.6(2)  <---------DEAR3(1)    --------->RAP2.6(3)            <---------------AtSPL3          <---------DEAR3(1)<---------AtMYB61      ----------->HVH21 <---------YAB1  --------->ANAC58           <---------RAP2.3(2)<---------MYB46(3)  <---------ICU4 --DOF2     <---------------AtSPL8         --------->RAP2.6(3)--------->ALFIN1 <---------ATHB12------   agtctgatagggaagaggtaccccaaccaatcttggagtctccaaggcggctatagcctttgccgtggtggcggcctgccactaattctgacggcttagg  16824100                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                     <---------MYB46(3)     ---------                                                                     <---------REM1(1)    --------->YAB1                     <---------MYB46(3)--------->CCA1(2)       <------ZmHOX2a(1)          <---------ICU4       <----------DOF2        <---------LBD16   <---------GLK1(1) --------->ALFIN1  <---------At4g35610 --->ANAC46       --------->MYB52(1)  <----------ID1       --------->ICU4          ------->TEIL<-----   ccacggtttcttttgtaatccaacggttgaaatcgggagagagacgaagcatatcagagccataaggagtgttgttgctaaaatgaagctactcatgatt  16824200                                                  <---------AHL20(2)                                                *TSS                                               --------->ARR14(2)                                           <---------LBD16                                          <---------AtLEC2                                         <---------ZAT18                                         <---------ZAT14                                         --------->ZAT18 ->ATHB12                    --------->ZAT18   <---------ARR14(2) --ICU4                      <---------ZAT14 ----------->GT1 -YAB1 --------->ANAC58      <---------ZAT18--------->ANAC58              --------->AHL20(2) >ICU4 --------->ANAC58      --------->ZAT14--------->ANAC58              <-----------TBP          -- ----YAB1             <---------ZAT6     --------->ZAT14              ----------->GT1              <-   agagcaaaaacgaaagattagtcagtgtaagtgaacttatttgtgcacggatataattttgtaaggctggactcgtttatatagagcctcgaggtgttat  16824300                                                <---------TOE2(3)                                               ---------->DOF2                                             <---------YAB1                                          <---------AHL20(1)                                          --------->AHL20(1)                                       <---------AHL20(2)                           ------>MYB83--------->AHL20(2)                        ------------>CBF  <---------AHL20(2)               <-----------GT1    <---------AHL20(2)            <----------DOF2------>MYB46(1)--------->AHL20(2)                   --------->YAB1 ------->ANAC55(2)    --------->ANAC46--------->AHL20(2)<---------ICU4  <---------SPL7  --------->AHL20(2) --------ANAC55(2) --------->ZAT14--------->AHL20(2)   --------->ICU4   --------->TOE1(2)           <   cacttaatattcttcttttacttcacaccaatctcttaaattaaaatattaaagataaaaattatgtagatggtcatacgagcataacaattatctatcg  16824400                                                                 --------->ICU4                                                            --------->LBD16                                                           --------->ANAC58                                                           --------->ANAC58                           --------->TGA1a                 --------->ANAC55(1)                           --------->bZIP60(1)             <---------ANAC55(2)                           <---------TGA1a                 --------->ANAC46                           --------->O2                    --------->ANAC55(2)                           --------->ANAC55(2)            <---------LBD16                           <---------O2                --------->ARR11(3)                           <---------ANAC55(2)         <---------ARR11(3)                           <---------bZIP60(1)         <-----------HVH21                           --------->ANAC46           <------ZmHOX2a(1)                            --              ----------------------->TaNAC69(2)    <---------TOE1(2)             <-----------RAV1(1)      --------->YAB1   <-----------HVH21           <---------LBD16  ----------->GT1       <---------- ---------AHL20(2) <---------LBD16       <-----------GT1<------ZmHOX2a(2)   <-----------HVH21--------   atttaaaatcataaaacatttccctgatcacgtcgttttcattttactaaatctcaggatcacggaaataatgtgatatgtcatatgttgttttacatca  16824500                                                                                                   --                            <---------DAG2                                                         <-                     --------->AHL20(1)                                                           ---                     <---------AHL20(1)                                                           ---                     --------->AHL20(2)                                                           ---                    --------->AHL20(2)                                                            <--    <---------At4g35610     <----------DOF2                                             <---------TOE2(3)    --------->At4g35610  <-----------GT1          ------->TEIL                          <---------YAB1 ------->YAB1      <---------YAB1       <-------TEIL                                 <---------MYB52(1) -GT1    ------->TEIL<---------AHL20(2) ------->TEIL                                <-------GAMYB <-- ->TOE2(3)      <---------YAB1      --------------->AtSPL8       xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   attgtaagatgaacatatatgattatattacttttctcaacgtacatttatgcatttacaagaacaatggtgcaagatgatgaggctgttatggatgcaa  16824600                                                     <---------ANAC46                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)   --------->ANAC46                          <---------ARR11(3)   <---------ALFIN1                          --------->ARR14(2) ------->CCA1(2)                             --------->ARR11(3) -----ZmHOX2a(2)                             --------->AGP1 ------>AGP1   ----------->GT1               <---------ARR14(2)         --------->ANAC58 ------>ARR14(2)                      <---------TOE2(3)    --------->AHL20(2)     --------->DAG2 ------>ARR11(3)             <---------LBD16 <---------AGP1<---------AHL20(2) --------->YAB1 -------ARR14(2)         <---------ARR14(2) <---------CCA1(2)           --------->ANAC58 -------ARR11(3)         --------->ARR14(2)----------->ARR10 <---------AHL20(2)  ---------->DOF2   gatccacacactaaattttgtaaattggatttggggaattaagtttagatcttcttcgtatatatatatgaggcaaacaaacataaagttttcaagaaca  16824700  Previous    Next  AGI:  At1g44224.1    Description:  similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G50570.1) Range:  from: 16823386    to: 16824248    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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