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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
YAB1
--------->
ARR11(3)
<---------
ANAC46
<---------
ARR11(3)
------
<---------
ANAC58
--------->
GLK1(1)
------
<---------
ANAC58
----------->
RAV1(1)
--------
<---------
MYB52(1)
<----------
ID1
<------
ZmHOX2a(2)
--------->
YAB1
----------
DOF2
===================================
HOX2a_HOX2a
--------->
TOE2(3)
<
-
TOE2(3)
<------
ZmHOX2a(1)
--------->
MYB52(1)
----------->
GT1
---------->
DOF2
tcctttaggcttgtactgaagattaggagg
ctacaaaaaacaacaaaacagagatcataagaagaagagaatgaagttaaattcttaaaacaaagataag
16791400
<---------
ZAT14
------>
ZmHOX2a(2)
---------->
DOF2
<---------
TGA1a
<---------
MYB52(1)
================================================
bZIP_DOF
--------->
YAB1
--------->
ZAT14
<---------
O2
--------->
HSFB2a(2)
--->
ANAC58
--------->
AtMYB61
--------->
O2
<---------
LBD16
--->
ANAC58
<---------
ALFIN1
===================================================
bZIP_DOF
->
CCA1(2)
--------->
MYB46(3)
--------->
TGA1a
--------->
LBD16
--
---------
ATHB12
<---------
MYB55(2)
------->
TEIL
<------
ZmHOX2a(2)
<----------
DOF2
aaatcatac
caaagtgcaaccactgcaaggagcatcacattgaacccaagtgagatcgcttccggtatcaatatcaaattgaaatgcctttggagggctt
16791500
<---------------
AtSPL8
<---------
YAB1
----------->
GT1
<---------
TOE2(3)
<------
ZmHOX2a(1)
--------->
ICU4
<---------
AtLEC2
<---------
ARR14(2)
--------->
DAG2
---------
---->
ZmHOX2a(1)
--------->
ARR14(2)
---------->
DOF2
<---------
AHL20(2)
--------->
CCA1(2)
cctatttgcattaagactgagtagtat
ctacagaaacagaggaaaaagttacaaaaaatgatttttttggtttgtttttgtattatcaacaagatagaga
16791600
<--
--------->
LBD16
<---------
TOE2(3)
<------
--------->
ANAC46
--------->
ETT(1)
--------->
ARR14(2)
<------
----------------->
AGL1
<---------
ARR14(2)
-------
<-----------------
AGL1
<------
NtERF2
<------
ZmHOX2a(1)
<------
-------->
P
<---------
ANAC46
<------
ZmHOX2a(1)
<---------
YAB1
<---------
ANAC58
<---------
LBD16
<------
ZmHOX2a(1)
<---------
TOE1(3)
<------
-->
GT1
<---------
ANAC58
--------->
DOF5.7(2)
<---------
TOE2(3)
<---------
REM1(1)
-------
aaacattgatgtgcttac
ccgagagggaagacgttgccggagagagggaagacgactgaggaaggagaggatttgatgaaggttttgaagattgaagatt
16791700
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
<---------
AtLEC2
<------
ZmHOX2a(1)
<---------
ARR11(3)
<---------
ANAC58
-------
YAB1
--------->
GLK1(2)
<---------
ANAC46
---
GLK1(2)
<---------
ARR14(3)
<---------
ANAC58
---
ARR14(2)
--------->
ARR11(3)
--------->
MYB52(2)
---------->
DOF2
-->
ARR14(3)
<---------
ARR14(2)
<----------
DOF2
--------->
AHL20(2)
---
ARR11(3)
--------->
ARR14(3)
------>
ZmHOX2a(2)
------------>
CBF
---
ARR14(3)
----------->
GT1
--------->
ARR11(3)
--------->
ANAC58
-->
ARR11(3)
------------------------>
ANAC81
<---------
ARR11(3)
--------->
ANAC58
---
ttgatagaggaactatgaccaagaacaagaacagaagaagagaaaatcttgatatcat
cttgatctttgttacttgcacgacaaacaataaaagaattca
16791800
<---------
YAB1
--------->
YAB1
<---------
YAB1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
At4g35610
--------->
ARR11(3)
<---------
ARR11(3)
------------>
CBF
<---------
ARR14(2)
<---------
ARR11(3)
<---------
AGP1
--------->
AHL20(1)
--------->
AGP1
--------->
CCA1(2)
--------->
ARR14(2)
<---------
AHL20(1)
<---------
ARR14(2)
<---------
GLK1(1)
----------->
GT1
---------->
DOF2
--------->
CCA1(2)
<---------
YAB1
------------>
CBF
----------->
GT1
<----
------->
DOF2
----------->
ARR10
--------->
CCA1(2)
--------->
YAB1
----------->
GT1
--------->
AHL20(2)
caaagagatgaagatgagatctgattataagagatagggtcaatatatcaatggtcatatagtaacgagaaaaaagagaatacagtaagacattaattct
16791900
--------->
ARR11(3)
<---------
ARR11(3)
<
<---------
AHL20(2)
<-
--------->
AHL20(2)
----
--------->
AHL20(1)
-----
<---------
AHL20(1)
--------->
AHL20(2)
---------->
DOF2
<------
<---------
YAB1
------------>
CBF
----------->
GT1
------------>
CBF
--------->
YAB1
<-------
------
DOF2
----------->
GT1
<---------
AHL20(2)
----------->
GT1
------------>
CBF
--------
ttgtgttttcatagaaaaatatagggtcaatatattctatttttttttggtaaaaatatagggtcaatatagaaagttcaatggtcatattctaatatca
16792000
----------->
GT1
--------->
TOE1(3)
----
<---------
ANAC46
--------->
AHL20(2)
----------->
GT1
---------->
DOF2
<---------
YAB1
---------
TOE2(3)
<---------
YAB1
<---------
AHL20(2)
--------
DOF5.7(2)
----------->
TBP
<---------
AHL20(2)
----->
DOF5.7(2)
<---------
AHL20(2)
--------->
AHL20(2)
---->
TOE2(3)
<---------
CCA1(1)
<---------
ZAT14
<---
---
YAB1
---------->
DOF2
<---------
RVE1(1)
<---------
ZAT18
<-----
--
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ZAT18
<------
->
ARR11(3)
<---------
ARR14(2)
<----------
DOF2
--------->
ARR11(3)
--------->
ZAT14
<--------
ttaacgtgaaaaaagagaatacagtaagacattaattctttgtgttttaagagatattttataaataaagaattaagtgcagactatttatattattatt
16792100
--------------->
AGL15
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ATHB51
-
<---------
AHL20(1)
<---------
ICU4
<---------
ICU4
--------->
AHL20(1)
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
--------->
ICU4
<---------
ICU4
--------->
ICU4
----->
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
<---------
YAB1
------
AHL20(2)
--------->
YAB1
<---------------------
WRI1
<---------
GLK1(1)
<------
----
YAB1
<---------
AHL20(2)
<---------
HSFB2a(2)
<---------
ANAC46
<---------
ICU4
-
---
AHL20(2)
<---------
YAB1
--------->
ATHB12
----------->
GT1
--------->
ICU4
-
-
YAB1
--------->
YAB1
<---------------
AGL15
---------->
DOF2
<---------
YAB1
--------->
YAB1
-
ttaatatattttctcccatttataattattttgcttgtttgggaagagaataaatacaaagaaatggtgtattttgatttcccaaaattatgatgacttt
16792200
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<-------
TEIL
----------->
GT1
<---------
At4g35610
<---------
ARR11(3)
--------->
At4g35610
--------->
At4g35610
--------->
AHL20(1)
--------->
ANAC58
<---------
At4g35610
--------->
ARR11(3)
--------->
ANAC58
--------->
At4g35610
<---------
ANAC46
-------->
AtLEC2
<---------
YAB1
<---------
HSFC1(2)
----
DOF2
--------->
AHL20(2)
<---------
HSFB2a(1)
-------->
ANAC58
<---------
ICU4
--------->
HSFC1(2)
-------->
ANAC58
--------->
YAB1
--------->
HSFB2a(1)
<------
ZmHOX2a(1)
--------->
At5g28300
-------->
ANAC46
--------->
ICU4
>>>>>>>>>
TBF1
<---------
AHL20(1)
<-------
GAMYB
ccaagcaagcagaaaattaaattatgagcagatgaagaagaagcttcgtagaaaatatttggaggacttccaacgcgttttagacacggttaagggctga
16792300
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AGI:
At1g44130.1
Description:
nucellin protein, putative. similar to nucellin protein, putative [Arabidopsis thaliana] (TAIR:AT1G77480.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61887.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461)
Range:
from: 16789948
to: 16791758
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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