Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <----------DOF2         --------->YAB1        <---------ATHB12       ------>MYB83                                             <---------ANAC46       ------>MYB46(1)                                          <---------ANAC58      --------->WOX13(1)                        <------ZmHOX2a(1)          ----------->GT1    --------->MYB46(3)            ----------->RAV1(1)           <---------ANAC58---------->DOF2<-----   ttcagaaccaatcatcttttacacatttacaaattccaacatttgagctaggaacggtgtttttttgtgtgtccatgaggtaaaaaggagtaatagaacg  16782700                                                       --------->RVE1(1)                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                      --------->GLK1(2)                                               <------ZmHOX2a(1)                                              --------->ANAC58                                              --------->ANAC58                <--------ATHB1        ----------->GT1                     <---------ANAC46                  --------->YAB1       --------->DAG2                       <-----------RAV1(2)              <---------ATHB51     ---------->DOF2                   =================RAV          ------>MYB46(1) --------------->AGL15                 <-----------RAV1(1)           ------>MYB83 <---------AtLEC2                    >>>>>>>>>ARR2   --------->CCA1(1)   ------------>CBF      <----- <---------------AGL15             <---------YAB1    --------->RVE1(1)  --------->YAB1         ------ ----HSFB2a(1)                <---------ZAT18 ----------->GT1   <-----------GT1               <------ZmHOX2a(1)   tttgcataaaaggtaattttgtaaatgaattgtgcatttgattgtggcaggaaaaaaatctcttaatcaccaaatgacaataatacaaaatcaagaggat  16782800                                                                                                   <-                                                                                        ------------>CBF                                                                                       <-----------HVH21           --------->ATHB12      --------->At4g35610                               <---------ARR14(2)   <----------DOF2               <---------At4g35610                               --------->ARR14(2) ----ARR14(2)     <---------MYB46(3)                                               --------->GLK1(2) --->ARR14(2)  <-----------RAV1(1)                         ---------->DOF2  ---------->DOF2     -----   tctatctttagtttgatttgttgttgaatccatttagctaaatgtttttgtttctgttttctaaaggagtttcttcagaaaagagaatatgtcaatgcct  16782900                                            <---------ZAT2                                            <---------At4g35610                                            --------->ZAT2                                            --------->At4g35610                                          <---------DEAR3(1)                                         ------>ZmHOX2a(1)                                <-----------ARR10                              --------->LBD16                             <---------ANAC58                          <---------DAG2              <-                             <---------ANAC55(2)              <----------DOF2                     <--                             <---------ANAC46                <---------ANAC58                  <-----       --------->MYB46(3)    <---------ANAC55(1)             <---------ANAC58        <---------ANAC58   ------>ZmHOX2a(1)         <---------ANAC58            <------------CBF   <-----------GT1   ------- --------ALFIN1           ------>ZmHOX2a(1) ----------->RAV1(2) ------------>CBF     <---------ANAC58 ->NtERF2 <---------KAN4(2)  --------->ANAC55(2)<---------TOE2(3)      <----------DOF2<----------DOF2   ccctcctcaacgaatgaccaagagactccttccgtgtcttctcctcggctgaggtatcgaattgctttcaatactttttgactatttgctttgctatctt  16783000                                                  --------->TGA2(1)                                                  --------->TGA1a                                                  <---------TGA1a                             -------                                                  --------->O2                                -------                                                  <---------O2                                -------                                                  --------->bZIP60(1)                         -------                                                  <---------ANAC58                            <------                                                  ==================================bZIP_DOF  <------                                                  =========================================MYC_MYB                                                  <---------bZIP60(2)                         -------                                                  <---------bZIP60(1)             --------->At5g28300                                     --------->YAB1                              <---------MYB46(3)                                   <<<<<<<<<<GATA-1                              ----------->GT1                          --------->ZAT14         <---------ANAC58             <---------At4g35610         <------------CBF <-------TEIL            <---------ANAC46             --------->At4g35610       <---------AHL20(2) <---------ZAT14        ----------->STF1             ------------>AtMYB77       <---------YAB1  <---------ANAC58        ----------->TGA1               ======================= <----------DOF2       <---------ANAC46 --------->AHL20(2)               ---------->DOF2      ------- --------YAB1          <---------ANAC58 <---------AHL20(2)               ============================ -------ARR11(3)  <----------DOF2----------->GT1<---------TGA2(2)  ------>ZmHOX2a(2)          ------- -----DOF2        ==========================================bZIP_DOF --------->LBD16      --------->YAB1 -->YAB1--------->ATHB51 --------->ALFIN1  ------------>CBF      --------->ARR11(3)<---------ARR14(2)   tatctttgtataattgagggcttttgggtgcagggacgataataaaacaatgacgtctgagatggatgatccagagaaagcagcggttacaatcacacgt  16783100 -->ANAC58 -->ANAC58 -->O2                           <------NtERF2 -->ANAC46                      ------>NtERF2 ---O2  --------->At4g35610    --------->ANAC46 ---TGA1a                   <---------DEAR3(1) -->ANAC55(2)            --------->ATHB12                                                           < ===MYC_MYB        --------->ANAC58        --------->ARR11(3)                             ----------- -->ANAC55(1)      --------->ANAC58    ---------->DOF2                             ---------->DOF2  < ===bZIP_DOF  --------->AtLEC2--------->RAP2.3(1)    --------->DEAR3(1)    --------->MYB52(1)      <- -->TGA1a  <-------TEIL <---------ATHB12   <---------ARR11(3)<----------DOF2  ----------->GT1      --   ctcatcgaacagcttcatgccaagaaatcatcggcgcaagagaaagagcttagcaccgctcggcttcttggtttagccaagggtaaaaaggaatgtagaa  16783200                                                                                             <-------                                                                                           --------->MYB52(1)                                                                                          ------>ZmHOX2a(1)           <---------GLK1(2)                                                             <---------MYB59 --------->ATHB12         <---------ANAC58               <---------HSFB2a(1)       --------->ZAT14 ---------YAB1            <---------ANAC58               --------->HSFB2a(1)      <-----------HVH21 >GT1  ----------------->AGL1   <----------DOF2          <---------HSFC1(2)     --------->At4g35610 ------ZmHOX2a(2)  --------->ANAC58                 --------->ALFIN1            <---------At4g35610 --------ARR11(3)  --------->ANAC46              <------ZmHOX2a(1)          <---------ARR14(2) ------->ARR11(3)  --------->ANAC58    <-----------GT1 --------->TCP20      --------->ARR14(2)   agatcattagccagaatgtgaacgccatgcctgcctttatatcacttcttaggagtggaaccctcttggcaaaactcaattccgcttcagtcctaaccgt  16783300                                 --------->ATHB12                                <---------ZAT6                            --------->ARR11(3)                            <---------ARR11(3)                            --------->ARR14(2)      --------->MYB46(3)                            <---------ARR14(2)    <---------ALFIN1                   <---------MYB46(3)     <-----------ARR10               <---------HSFB2a(1)       <-------GAMYB<---------At4g35610    ---------->DOF2--------->MYB52(2)    <------NtERF2--------->At4g35610                          <- --------->AtLEC2 <-------TEIL  <---------YAB1------->TEIL       <----------DOF2            --------- -----MYB.PH3(1) <---------MYB52(1)   <---------LBD16--------->DEAR3(1)             <---------MYB46(3)   tctatgcaaagacaaaaacgttcgttctaagatactgataggcggatgtatcccaccgctgctatcacttttgaagtctgactctgtggatgcaaaaaga  16783400                                                                         --------->ANAC55(2)                                                                         --------->ANAC58                              <---------ANAC58                           <---------ANAC55(2)                              <---------ANAC46        <------MYB46(1)    --------->ANAC55(1)                              <---------ANAC58       --------->MYB59     --------->ANAC58                          <---------ANAC58           --------------->AtSPL8     <---------ANAC58                          <---------ANAC58  <---------YAB1               --------->ANAC46                     <---------HSFC1(2)   <------MYB46(1)      <---------AHL20(2)   <---------SPL7              <---------ARR14(2)          <------MYB83<------MYB83      <---------LBD16              --------->ARR14(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <---------ANAC46      <---------ATERF1(1) --------------->AGL15      <---------------AtSPL8     <---------ANAC58     --------->DEAR3(1)  ----------------->AGL1   <---------REM1(1)  <-----------HVH21 --------REM1(1)     --------->HSFC1(2)   ----------->GT1      <---------AHL20(1) <------NtERF2 ->DOF2  ------>NtERF2   <-----------------AGL1--------->ICU4  --------->AHL20(1) --------->ALFIN1   gttgtagccgaggccatatatgaagtttccttgtgtggaatggatggtgataatgtaggtactaaaatatttgtcacggaaggcgtggtaccgagtttgt  16783500                                                                                ---------->DOF2                                                                           --------->At5g28300               ----------->GT1                                            ----------->GT1              ----------->GT1                             <----------DOF2 --------->LBD16             <---------LBD16                         <------MYB46(1)     <---------ANAC46            <---------ANAC46                         <------MYB83       <---------LBD16       ---------->DOF2         <<<<<<<<<<<<<<<<<LFY<--------P        <----------DOF2      --------->AHL20(2)      --------->ANAC58    <-------GAMYB   <---------ARR11(3)      <---------AHL20(2)      --------->ANAC58   <------MYB83     --------->ARR11(3)   --------->WOX13(1)     <------ZmHOX2a(1)      <---------MYB46(3) <---------ICU4 <------ZmHOX2a(2)       <----------ID1   <------ZmHOX2a(1)      --------->GLK1(1) ================================HOX2a_HOX2a     <------MYB46(1) <---------GLK1(1)   gggatcaattaaagacggggaaaaaacaggacaagacagtggaaggacatttggttggagctttgagaaatctttgcggtgataaagacgggttttgggc  16783600  Previous    Next  AGI:  At1g44120.1    Description:  C2 domain-containing protein / armadillo/beta-catenin repeat family protein. similar to binding [Arabidopsis thaliana] (TAIR:AT1G77460.1); similar to binding [Arabidopsis thaliana] (TAIR:AT2G22125.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61890.1); similar to Armadillo/beta-catenin-like repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91813.2); similar to hypothetical protein OsJ_031877 [Oryza sativa (japonica cultivar-group)] (GB:EAZ17668.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Arma Range:  from: 16783050    to: 16789854    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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