Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ---------->DOF2                                              <-------TEIL    <---------ATHB12                     --                                         <---------------------WRI1                             <----  --------->ANAC46             --------->ANAC58    --------->YAB1------->TEIL                   ----- ->TEIL                        --------->ANAC58   <---------ATHB12                             ------ ----->AtSPL8                  --------->ANAC46 --------->WOX13(1)        --------->YAB1       ------   ctatacaaaaccaaaatcaaactcaaaatcaataagcaatctcatagattcaatcaaagaaacaatgaatccatattcaaaattgatcacaaaaaccaaa  16779300                                                       --------->ARR14(2)  ----------->RAV1(1)               ----------->GT1    --------->GLK1(2)                     -------- --------->ANAC46               ------>ZmHOX2a(2)      <---------ARR11(1)                    <------- ------->ANAC46               --------->ARR11(3)       ------->TEIL   --------->AHL20(2)     <------- -----ARR14(2)                <---------ARR11(3)       <---------ARR14(2)              --------->ANAC58 ---->ARR14(2)                ------->TEIL            <---------CCA1(2)       <------ZmHOX2a(2) >MYB46(1)            <<<<<<<<<<<<<<<<<LFY            <---------ARR14(1)     <---------ARR11(3) >MYB83     ---------->DOF2   <---------AGP1  <---------ZAT6    <---------ATHB12       --------->ANAC58   tccacaacaaaaaatgaagcgaagaaacaatggatctatagtgaattagagtaagcgaatcttcaaatcaaactaaatagatcacagaaacgaaagattt  16779400                                                                               --------->ANAC55(2)                                                                             <-----------GT1                                      <---------GLK1(2)              <------MYB46(1)                           --------->MYB52(1)                        <------MYB83     <-------TEIL        --------->AtMYB61                         <---------WOX13(1)   --------->ABI4(2) ->ARR11(3)            ------->TEIL--------->YAB1                --------->ATHB12 --------->MYB52(1)< --GLK1(2)            --------->ARR14(2)                   <----------DOF2----------->GT1    <------- --ARR11(3)           <---------ARR14(2)         --------->YAB1 <---------YAB1 <---------ANAC55(2)  <   tgaaaaattcatagcgaaattgaagaacctcaccgaatcagaattttgtaatcgtgaggcgattttttgattggtaatgttacttaacggtgctcgtttc  16779500         ----------->RAV1(1)         ------>NtERF2                                                                            <--         --------->LBD16                                                                          ---        --------->ANAC46                                                                     ------>ZmHOX2a(2)        --------->RAP2.6(2)                                                                 <------ZmHOX2a(2)        --------->ATERF1(2)                                                                --------->ARR14(2)        --------->DEAR3(1)                                                       ===================HOX2a_HOX2a        <---------ATERF1(2)                     ----------->HVH21        <---------------------WRI1--       <---------LBD16           --------->At4g35610                   <---------ANAC46    --------->ARR11(3)     --------->DEAR3(1)   <---------GLK1(1)   <---------ANAC58     --------->ARR11(3)      <---------ARR11(3) -----------TGA1          --------->GLK1(1)   <---------ANAC58     <---------ARR11(3)      <---------ARR14(2) --CCA1(2)<------NtERF2   --------->ARR14(2) <---------MYB46(3)--------->YAB1    ==================HOX2a_HOX2a -----------HVH21   <-----------GT1      --------->ALFIN1     <---------ATHB12   <------ZmHOX2a(1)<--   ttcgtcatcgccggcataagtttaacagaattctccgatgaagatggtgcttgacgcttcgctaatgaagatttcgtcgaagaggaaaacgaagatcgcc  16779600         --------->KAN4(1)         <---------HSFC1(2)         <---------HSFB2a(1)         --------->HSFC1(2)         <---------KAN4(1)                                      --------->DAG2         --------->HSFB2a(1)                                   ---------->DOF2        <---------KAN4(2)                                  --------------->AGL15 -------ARR14(2)                                           <---------------AGL15 ------>ARR14(2)                                      --------->GLK1(2)                            -- ------->GLK1(2)               ----------->GT1        <---------ARR14(2)               *TSS  -------- -------GLK1(2)     <---------AHL20(2)   ------->TEIL<---------GLK1(2)                 ---------->DOF2   gattctgaagaatgttcgacattttttttcttagggtaaaatgaatcttctctgagaatctctgaaaaaggaaacagagttttaatggcgaaagagaaag  16779700                                                                              <-------GAMYB                                                                         ----------->HVH21                                                                       ------>ZmHOX2a(2)                                                                     --------->ARR11(3)                                                                    --------->YAB1                                                 <---------AHL20(2)--------->KAN4(1)            -----                                                 --------->AHL20(2)--------->ICU4               <----                                              --------->AHL20(2)   <---------HSFB2a(1)          <----                                             --------->AHL20(2)   <---------KAN4(2)           -------                                             <---------AHL20(2) <------ZmHOX2a(1)          --------->ALFIN1 -------->DOF2        ---------->DOF2 ----------->GT1           ==============HOX2a_HOX2a<---------ANAC46 -->DOF2  ----------->GT1            <---------TOE2(3)        <---------TOE2(3)<---------MYB52(1)   agaaagagagagaggttttaaaaacaaagcgaaggaagtgaggttaaataattttttgaaatttgaggaatgatcgtgaccgttgattttgaagtgtaga  16779800                                                                                   ----------->GT1                                                                             <---------ANAC55(2)                                                                             --------->ANAC55(2)                                                                             --------->ANAC58                                                                             --------->TGA1a                                                                             --------->ANAC58                                                                             ========================                                                                             <---------TGA1a                        ---------->DOF2                                      --------->O2                   ------->TEIL                                         <---------bZIP60(1)             <---------ZAT14                                            --------->ANAC46             --------->ZAT18                                            --------->bZIP60(1)           <---------ZAT18                                              --------->ANAC55(2)          <---------ANAC46                                              <---------ANAC55(2)          <---------ANAC58                                              --------->ANAC58          <---------ANAC58             <---------MYB52(1)               --------->ANAC58 ---->ARR11(3)  --------->ANAC58      =================================================MYC_MYB -----ARR11(3)  --------->ANAC58      <-------GAMYB           ----------->GT1<---------O2 -----GLK1(2)<---------ZAT18    ------->TEIL             ----------->HVH21  ------>NtERF2     <------ ---->ARR10--------->ZAT18   --------->ALFIN1     --------->ICU4      <-----------GT1        --------   ttttgttttggagcgtgcacgaattttaaaggtgtatgtctgttatttagtattgatcactgacctgttatattacgccacgtatgggttaattagcttt  16779900                                                                           --------->AHL20(2)                                                                           --------->AHL20(1)                                                                           <---------AHL20(2)                                             <----------DOF2               <---------AHL20(1)                                             <---------DAG2               --------->AHL20(2)            ----------->HVH21         <------MYB83                   ----------->GT1 ====bZIP_DOF                         <------MYB46(1)               --------->ANAC58               <- ----DOF2 --------->ALFIN1           --------->MYB59                --------->ANAC58              <-- ------->AGL15                     <---------MYB52(1)             --------->MYB52(1)         <-------   tagggaaacaatgtgtgacagtcagtaacgagactcggttcggtttactttttttgaattcgaatttcaaacggaaataaattcgaatttcaaacggtca  16780000                                                                                 --------->ZAT2                                                                                 <---------ZAT2       --------->ZAT18                                       --------->AHL20(2)  <---------At4g35610       <---------ZAT18                                    --------->AHL20(2)     --------->At4g35610    <---------ANAC58                                  ----------->GT1           <---------ARR14(2)    <---------ANAC58                                ---------->DOF2>>>>>>>>>EIN3--------->ARR14(2) -- ---------DOF2           --------->AHL20(2)    --------------->AGL15           <------ZmHOX2a(1)   <- -------DAG2       <----------DOF2             <---------------AGL15        <-----------RAV1(2)  ---- ----HVH21 <----------DOF2                    ----------------->AGL3     <---------GLK1(1) <---------   ccttttgggtgctctttctctcttttttaaaataagttggagacataaaccatataaagataaatttatacattgaaatcaggagctgctatttttcaat  16780100                                                                                            <--------              --------->ANAC46                                                              ---------              --------->ANAC58                                                 <---------AHL20(1)          <---------At5g28300                                                  <---------AHL20(2) <-- ------->AHL20(2)                                                              --------->AHL20(1) <-- --------AHL20(2)                                                        ----------->GT1  <---------YAB1 ----->YAB1   --------->ANAC58                                   <---------ANAC46       <---------ICU4 --GT1<----------DOF2                                ----------->GT1   <---------YAB1   --------->YAB1   tttaaatacttttaccacgaaaattcaatgtgatttgctgtttaaaattttcaaaatgtgaaatatggagtttatgagtaaaatatttgatcatgatatt  16780200  Previous    Next  AGI:  At1g44110.1    Description:  CYCA1;1 (CYCLIN A1;1); cyclin-dependent protein kinase regulator. Identical to Cyclin-A1-1 (CYCA1-1) [Arabidopsis Thaliana] (GB:Q9C6Y3); similar to CYCA1,2 (CYCLIN A1,2), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT1G77390.1); similar to cyclin (GB:AAA51660.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like Range:  from: 16777305    to: 16779687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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