Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->YAB1     <---------YAB1    <---------ARR11(3)    --------->ARR11(3)   --------->YAB1  <---------YAB1 ---------ICU4                                                           <---------LBD16 -------->YAB1                                                        -------->P                    < --------ATHB12                                          ----------->HVH21--------->TOE1(1)         - ------->ICU4                                    <---------ARR14(2)<---------ANAC58           <------ZmHOX2a(1) --------ATHB51     --------->ARR14(2)           --------->ARR14(2)<---------ANAC58      <---------REM1(1)   aattatgatcataaactacacaaatctactaaaaatcaagatgaattagaaaatttgccctgaaacttggcttacctcggagactagagtattgtaggag  16711800                                                                                    <---------DEAR3(1)                                                                              <---------ANAC46                                                                              --------->ALFIN1                                                                              <---------AtMYB61                    <---------ZAT2                                          <---------MYB46(3)                    --------->HSFB2a(1)                                    <---------AtMYB61                    <---------HSFB2a(1)                                    --------->ALFIN1                    <---------At4g35610                                 <---------DEAR3(1)               <---------LBD16                                          <---------AtMYB61            ---------->DOF2                                             --------->ALFIN1           --------->YAB1                                             <---------MYB46(3)     <-----------TGA1          --------->ZAT6                         --------->MYB55(2)     <-----------HVH21      <------ZmHOX2a(1)                        --------->ALFIN1    --------->ANAC46<---------HSFC1(2)                               <---------DEAR3(1)--------->WRKY38(1)    --------->DEAR3(1)   <---------HSFB2a(2)                         <---------AtMYB61--------->At5g28300    --------->DREB2C(2)  --------->HSFB2a(2)                    --------->MYB52(1)  <---------ANAC46 --------->DEAR3(1) --------->At4g35610                        --------->ARR14(2)----------->TGA1---- <---------ALFIN1   --------->ZAT2                             <---------ARR14(2)----------->HVH21  < --------->AtMYB61  --------->HSFC1(2)                      <---------HSFB2a(2)<---------MYB46(3)<--- ---------ABI4(2)  --------->ARR14(2)                  <---------MYB46(3)<---------MYB46(3)     ----- -------->MYB46(3) <---------ARR14(2)                  <-----------RAV1(1) <---------DEAR3(1)   <----   acaccaccgtcactaatagcggagcttcgaggaacactaattcttctattcaagagattgttgcagaaacggtggtggtggtggtgacggtgactgaaga  16711900                                     <---------TOE2(3)             <----------ID1          <---------------AtSPL8 <---------------AGL15             --------->ICU4                                                   < --------------->AGL15        ----------->GT1       --------->ANAC58                               <- ----->GLK1(1)             <------MYB83<------ZmHOX2a(1)      <------ZmHOX2a(1)                    -- -----------------AGL2     <------MYB46(1)          --------->ANAC46                               <- ------GLK1(1)            --------->ALFIN1          --------->ANAC58                       --------->YAB1 ---->ARR11(3)            <---------AtMYB61     <-----------GT1            <---------TOE2(3)  ------- -----ARR11(3)          <------ZmHOX2a(1)      ----------->HVH21      <----------ID1<---------AtLEC2-   tttctctattgggatgagacaaaacaggatggtggtaataaggaacgatgtaacaggccatggaggaacataacaacaaggttaatgcatgaacaataac  16712000 <---------GLK1(2) --------ATHB1 --------ATHB12                              <---------ANAC58 ------->ICU4                       <----------DOF2 --------YAB1                     ---------->ID1                                      --------->ANAC46 -->YAB1<-----------TGA1         <-----------GT1                          --------->GLK1(2) --------- -------->YAB1     <---------At4g35610       <---------ANAC58      --------->ALFIN1   <---------REM1(1)   aatgattcttcgtcattgttcatcttccaccattttttctttttttgtcttgagaaacagagaagagatgtggaagaatgtgttttagacgtagccacaa  16712100                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                         <---------AHL20(2)                                                                      --------->AHL20(2)                                                                     <---------AHL20(2)           <--                                                                     <---------YAB1              <---                                                                  <---------ARR11(3)           <-----                                                              <---------ANAC46                -------                            --------->ANAC58                  <---------ANAC58--------->AHL20(2) <---                    <----------DOF2                           <---------ANAC58<---------AHL20(2)<----            <---------ANAC58--------->ANAC58                  --------->ANAC55(2)        <-----------         ----------->HVH21<---------ALFIN1                    <---------ANAC55(2)  ----------->GT1<-- -->RAV1(1) <---------ANAC58--------->ANAC46         *TSS  <---------GLK1(1)<-----------TBP  <-------   attcagtcttggtgacgagcttctttctccacacaaattcgattttgcaaattgattttggatttcgtgatattatttatttatatcgaaatattgtgat  16712200                                --------->ANAC58                                --------->ANAC58                             <---------At4g35610                          --------->TGA2(2)                         <-----------TGA1                         <-----------HVH21 <---------MYB46(3)     --------->O2 --------->MYB55(2)     --------->ANAC58 ----MYB46(1)           --------->ANAC58 ------AtMYB61          <---------O2 <----------DOF2 -------CBF             --------->ANAC46                                     <---------ANAC58 -->ATHB12              ========================bZIP_DOF                     <---------ANAC46 ------MYB46(3)         --------->TGA1a             <---------ARR11(1)       <---------ANAC58 -----WOX13(1)          --------->bZIP60(2)        <---------CCA1(2)        <------NtERF2 -CBF                   <---------TGA1a        <-----------GT1            <---------RAP2.6(2) ----MYB83            <---------ALFIN1    ---------->ID1               <---------AtMYB61 --YAB1          <---------MYB46(3)  ------>ZmHOX2a(1)      --------->ARR11(3)                   ----   tggtggatggagttgagagttgttccacgtcagcaagtccttttgtttttttcatatctatagataatgagctatggtggcttcaatattagagtccaag  16712300                      --------->AHL20(2)                      --------->AHL20(1)                ------>MYB46(1)                     <---------AHL20(2)                 ------>MYB83<---------ANAC55(2)                     --------->AHL20(2)               <---------MYB46(2) --------->ATHB12             ----------->GT1<-----------GT1           <---------MYB59   <---------YAB1     <---------AHL20(2)  <---------YAB1          ------>MYB83       --------->ANAC55(2)          <---    --------->AHL20(2)<---------AHL20(2)         ------>MYB46(1)   <-------TEIL     <-----------GT1 ----->AHL20(2)  <---------AHL20(2)            <---------MYB59 <---------YAB1  <---------ANAC46  ----   ttaatataaaatgaattgtataattttattatacaagtttgcaaaggtaccaaataccaaactatatgatacatatcattggtgtataaccaagtttatt  16712400                                                                                  --------->ANAC58                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                         <---------ICU4                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      --------->bZIP60(2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                 xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                              xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             <---------YAB1   --------->ANAC58                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)           --------->DAG2             ---------->DOF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          ---------->DOF2     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <-----------GT1           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------AHL20(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)----------->HVH21--------->ANAC58 ----->AHL20(2)<-------TEIL<------ZmHOX2a(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <----------ID1   tatatttacaaaaaaagttcattagggggatcatatatatgaaagttggctaatactctccatatgagtgacacatcatcacacaagaaaatgacaagtg  16712500                 <---------AHL20(2)                 --------->AHL20(2)             <---------AHL20(2)                                        <---------GLK1(2)             --------->AHL20(1)                                  <---------ZAT6             --------->AHL20(2)                                  ----------->GT1            --------->AHL20(2)                                   <---------ANAC46            <---------AHL20(2)                                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->AHL20(2)                         ---------->DOF2   <---------AHL20(2)        <---------AHL20(2)                    <----------ID1 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->TOE2(3)                 ----------->GT1     <-----------RAV1(1) xxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<----------DOF2                           --   taattctacattaattaaattaaaaaactagcaaaactaattgagaaaaaaacaaaagtcttttgttgtgttaaattctccattaatctcactcttaaat  16712600                                    <-----------------------TaNAC69(2)                            <--                                   <---------ICU4                                                 xxx                                 <---------AHL20(2)                                               xxx                                --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               xxx                               <---------YAB1 --------->YAB1                                      xxx                              <---------AHL20(2)                                                 <xxx                              --------->AHL20(2)                                                 <---                             --------->YAB1 --------->ANAC58                       <---------AHL20(1)                       --------->YAB1       ------>MYB46(1)                        <---------AHL20(2)                      --------->AHL20(2)    ------>MYB83                           --------->AHL20(2)                   --------->AHL20(2)       --------->ANAC58             --------->AHL20(2)      <xxx                  --------->AHL20(2)<---------------AtSPL8               <---------AHL20(2)      ----                  <---------ATHB12--------->ICU4                        --------->AHL20(2)       xxxx     --------->HSFB2a(2)  <---------ICU4    --------->AtLEC2         <---------AHL20(2)       xxxxxxx     <---------HSFB2a(2) --------->ICU4 ------->TEIL                 --------->AHL20(2)       xxxxxxx ----->TEIL   <---------ATHB12--------->AHL20(1)    <----------DOF2 --------->AHL20(2)        xxxxxxx   gaattttctaaaaccattcaataaataaaaattataataatgtaccaagcacaactttcattctattctatttatttaattttaaaaaatttcatctagg  16712700  Previous    Next  AGI:  At1g44000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11911.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81476.1) Range:  from: 16710508    to: 16712153    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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