Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <-----------GT1                                                  --------->AHL20(2)                      --------->YAB1                                      <---------AHL20(2)             <---------GLK1(2)   <---------YAB1                                     <---------AHL20(1)        <-----------GT1         <-------------         <---------ZAT6              --------->AHL20(2)   <----------DOF2              -------------- ----->YAB1        ------->TEIL      <---------AHL20(2)   <---------DAG2   <---------MYB52(1) -----ATHB12<---------YAB1---------->DOF2     <---------YAB1   --------->ZAT6   <---------AHL20(2)---   gaaaacatttagtgatgaatgaatatgagaaagttgcaatttttttttataaataaacaactttttcactaaattctcttagtttatttctataataagt  16656100                                                                                     <---------AHL20(1)                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)                         <---------WOX13(1)                                         --------->AHL20(2)      <-----------GT1 <---------AHL20(2)                                         <---------YAB1   --------->YAB1     --------->AHL20(2)                                        --------->AHL20(1)  <---------AHL20(2) <---------AHL20(2)            <---------AHL20(2)           <---------AHL20(1) --------->AHL20(2)  --------->AHL20(2)           <---------AHL20(2)            <---------AHL20(2) --AGL15           ------->TEIL       <-----------GT1                           --------->AHL20(2) ->AGL15     <---------AHL20(2)   --------->AHL20(2)                           --------->YAB1      -- ------>AHL20(2)<---------YAB1 --------->YAB1 <----------DOF2                  --------->AHL20(2) <--   ttatataataactaatttatgaatttaattgaatcataaattacatttcttttttatttagagttttttagtctcactgaattatattaaatttcatact  16656200                                  --------->ICU4                         <---------AHL20(2)                        <---------YAB1                      --------->YAB1                      <---------ICU4                      -------->ATHB1                     --------->ICU4                     <---------AHL20(2)                     --------->AHL20(2)                     <---------ATHB51                  --------->AHL20(1)      --------->AHL20(1)                               <---------AHL20(2)                  <---------AHL20(1)      --------->AHL20(2)                               --------->AHL20(2)                  <---------AHL20(2)      <---------AHL20(1)                           --------->AHL20(2)                  --------->AHL20(2)      <---------AHL20(2)                          <---------YAB1                 --------->AHL20(2)    --------->YAB1                              <---------YAB1                 <---------AHL20(2)  <---------YAB1                              ----------->GT1 ------->YAB1<---------AHL20(2)   <---------AHL20(2)     <---------WRKY12 <---------WOX13(1)     <--- -------YAB1 --------->AHL20(2)   <---------YAB1   ---------->DOF2  <---------ARR14(2)--------->ICU4   attataacttgagaataaaataaattattatttgatattattaataaatttgtaaaagttcaacgtagtagatttgattaatcttgttattatttaaata  16656300                                                                                                   <-                                                                                                   <-                                                                    --------->YAB1                ---                                                                 <---------ICU4                   ---                                                                 <---------AHL20(2)               <--                                                                --------->AHL20(2)   <---------AHL20(2)          --------->AtMYB61                                   --------->YAB1        --------->AHL20(2)         --------->MYB46(3)                 --------->AtLEC2 <---------YAB1       --------->AHL20(2) <---------YAB1                   <---------TOE2(3)--------->ARR11(3)        ------------>CBF<xxxxxxx ------ANAC55(2)                 <-----------GT1   <---------ARR11(3)  <-----------GT1       --------   cttaaaattggaccaccatctaattagcatcagtttaacatttttcattcaaagatttatagtataataaatataacaaaacaatataaaatttcatcaa  16656400 <------------CBF --------YAB1 --------AHL20(2) ------>AHL20(1)                         <---------ARR14(2)           *TSS  --------->DAG2 ------>AHL20(2)          --------->LBD16--------->ARR11(3)        ---------->DOF2 -------AHL20(1)         --------->LBD16 <---------ARR11(3)    ---------->DOF2    --------->ICU4 xxxxxxxxxxxxxxxsmallRNA(i2)      ---------->DOF2    ----------->GT1 ----------->GT1 ---->CBF               <---------LBD16  --------->ARR14(2)---------->DOF2 ---------->DOF2        <--   tataattgcaaaaaatcaaactaaatccctgaaaaaaaaagaatatatgcctagacagaaaaaaagaaagaaagaaataaagtaatgaagaaaactagaa  16656500                                                 <---------ALFIN1                                                 --------->AtMYB61                                                --------->MYB46(3)                                              --------->DEAR3(1)                                              --------->AtMYB61                                             <---------MYB55(2)                                             --------->MYB46(3)                                            ------>MYB83                                            ------>MYB46(1)                                           --------->ANAC46                                       ------>MYB83                                       ------>MYB46(1)                                     <---------MYB59             ------>ZmHOX2a(1)       --------->AtMYB61               <<<<<<<<<TBF1   <---------ANAC58             --------->HSFB2a(2)         <------MYB83<<<<<<<<<TBF1   <---------ANAC46             <---------HSFB2a(2)        --------->MYB59   <---------ANAC58          --------->AtMYB61<---------ALFIN1  <----------DOF2 ---------RAV1(1)         <---------ALFIN1--------->MYB46(3)<------MYB46(1)   ------>ZmHOX2a(1)   atgttgcttcttctcctattgaatgtgtccacctccagaccaaacccaccaccactcttgttcggtctttcttcttcttcctcttcaactctcaaacaat  16656600                                                                 <---------MYB52(2)                                                            ----------->RAV1(2)                                                          ------>MYB83                                                          ------>MYB46(1)                                                        <---------MYB46(2)                    <------                                                        --------->MYB46(3)                 <---------                <---------CCA1(2)                       --------->AtMYB61                 --------->ANAC46         --------->YAB1                              --------->YAB1<-----------GT1  ------>ZmHOX2a(1)    <----------DOF2                                 --------->MYB46(3)           ------>ZmHOX2a(1)    <---------DAG2                                  <---------ATHB12            <---------ALFIN1   --------->TOE2(3)      ------>ZmHOX2a(1)       --------->WOX13(1)-------->P------>ZmHOX2a(1)   <--   ctcttcctttatcatcttctatctcttcctctgttccttcttctggttttgccaatcaccaaacctgactaacccttctcctcctcctctctccgtcgct  16656700                                 --------->HSFB2a(1)                                 --------->HSFC1(2)                                 <---------HSFB2a(1)                                 <---------HSFC1(2)                                <---------ARR14(2)                                --------->GLK1(2)                                --------->ARR14(2)                               <---------GLK1(2)                              <------NtERF2                             --------->LBD16            <---------ARR11(3)                            --------->RAP2.6(2)         --------->ARR11(3)                            --------->RAP2.3(2)     --------->ANAC58                            --------->LBD16        <------NtERF2                           <---------LBD16        ------>NtERF2              --------->HSFC1(1)                          --------->ABI4(1)      --------->DEAR3(1)          --------->HSFB2a(2)       <------NtERF2      ------>NtERF2          ----------->HVH21  --------->ATHB12      --------->LBD16    --------->DREB2C(2)     <---------DEAR3(1)<---------ATHB12       <---------ZAT18     <---------ANAC46    ------->GAMYB          --------->ATERF1(1)--------->ICU4   ------>ZmHOX2a(2)     <---------LBD16     <---------ALFIN1      --------->LBD16     <---------YAB1 <---------ARR11(3)    <---------LBD16      --------->DEAR3(1)    <---------ATERF1(1)<---------TOE2(3)<------ZmHOX2a(2) <-----------HVH21      --------->MYB46(3)     ------>NtERF2  --------->TOE2(3)  <---------GLK1(1) ---DEAR3(2)            --------->DEAR3(2)    <---------DEAR3(1) --------->YAB1  --------->GLK1(1)  - --HVH21               <---------ATERF1(1)   <---------LBD16  <----------DOF2<---------HSFB2a(2)<---- -------ALFIN1        <---------ALFIN1 <<<<<<<<<TBF1--------->ANAC58<---------ICU4--------->ARR11(3)<   ccccttcgcggggatgccaattctccaccgccggaatcttcttcttctccggcgacgaaatcttctttaatgatttcttctagagatcccaatgccctct  16656800      <-------GAMYB      <------NtERF2     <---------DEAR3(2)     <---------MYB46(3)    --------->ALFIN1    <---------AtMYB61    <---------DREB2C(2)                                                 <---------AHL20(2)    <---------DEAR3(1)                                                 --------->AHL20(2)    <---------ANAC46                                                   <---------AHL20(2)   <------NtERF2                                                       <---------AHL20(1)   <---------ABI4(1)                                             ------>ZmHOX2a(2)  <---------RAP2.3(1)                                           <------ZmHOX2a(2) <---------DEAR3(1)                                            <---------ARR14(2) <---------RAP2.6(2)                                           --------->ARR14(2) <---------RAP2.3(2)     <---------AHL20(2)                    <-----------ARR10 <---------RRTF1(3)      --------->AHL20(2)                    <---------ARR11(3)           <-------- -------->At4g35610  <---------HSFB2a(2)                       --------->ARR11(3)      --------->LBD16 ------DOF2  <-----------RAV1(2)------->TEIL                  <------ZmHOX2a(1)      <---------LBD16 ---------At4g35610  --------->HSFB2a(2)                    <---------TOE2(3)  <-----------GT1 <-----   ttagcggcggtggaatcaggtttctaaaaaattgaatctttctatcgatttttctcaaattttaggatcttaatttttttgtttctatccggttttgttg  16656900                                                <---------ZAT6                                          <---------YAB1                                         --------->KAN4(2)        ----------->RAV1(1) <----------DOF2                     ----------->GT1       ---------->DOF2 <---------DAG2                     <---------YAB1  ---------->DOF2 ---RAV1(1)<------ZmHOX2a(1)        <---------TOE2(3)  ----------->GT1                        ------- ----REM1(1)                        <---------TOE1(3) <---------TOE2(3)     <------ZmHOX2a(1)<-------   tagctttttagcaggagttagaactgtgaagtttagttatggttattctagtcttaaaggtaaaagagcaacaatggaggattacttcgaaactagaatc  16657000  Previous    Next  AGI:  At1g43900.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G31750.1); similar to unknown [Populus trichocarpa] (GB:ABK96108.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site; (InterPro:IPR000222) Range:  from: 16656470    to: 16658368    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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