Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ANAC58              <---------ATHB12         >>>>>>>>>>>>>>>>>LFY         --------->CCA1(2)                  ------->GAMYB         <------ZmHOX2a(2)             <-------TEIL         <<<<<<<<<<<<<<<<<LFY       <---------ANAC58        --------->AGP1              <---------ANAC58        <---------ARR14(2)          --------->ANAC55(2)        <---------ARR11(3)          <---------ANAC55(1)        --------->ARR14(2)  <---------ANAC55(2)  --------->YAB1 <---------ANAC46   <---------ANAC55(2)                                            <-  --------->TOE2(3) <-------GAMYB   <---------ANAC46           ------------------------>ANAC81------- ------->WOX13(1)<---------ANAC58  --------->MYB59          ---------->DOF2                   <------ ---DOF2--------->ARR11(3)  --------->ANAC55(2)      <---------ANAC46                   <---------YAB1   tcaaccataagatccaatggctcgttgaatacgtagttacgtacaactggcattctcgtgtacaaagtcactaaaacaaaaacaaaatccattatagata  16579700                            <---------YAB1                          --------->YAB1                 -------->HAHB4                <---------YAB1             <---------AHL20(2)             --------->AHL20(2)                                               --------->TOE2(3)            <---------AHL20(1)                                              <-------TEIL            <---------AHL20(2)                                          <---------AHL20(2)   <----------ID1--------->YAB1                                         --------->AHL20(2) --------AHL20(2)<---------ICU4             <------ZmHOX2a(2)    ----------->GT1 -->ARR11(3)--------->AHL20(1)             <---------ARR11(3)   --------->ARR11(3)     ----------->GT1 ---ARR11(3)--------->AHL20(2)             --------->ARR11(3)   <---------ARR11(3)---------->DOF2   -   ttaaaacgactaaatttaattatagcaataacaattgaacagcaagatcacaaatttagaattcaagagcttaaaaaattcattaaaagtagaaaaatac  16579800                            --------->AHL20(2)                            <---------AHL20(2)            <---------YAB1  <---------YAB1             <-----------GT1           --------->AHL20(2)                     --------->AHL20(2)           <---------AHL20(2)--------->ATHB12     <---------AHL20(2)                          <------        --------->TOE2(3) <---------------AGL15  <---------AHL20(2)                           <------ --------->AHL20(2)      <-----------------AGL3  --------->AHL20(2)                        <--------- --------->AHL20(1)    <-------TEIL      ---------->DOF2 --------->ZAT6          <----------ID1 -------->YAB1    ---------->DOF2   ----------->GT1   <-----------GT1   ---------->ID1    <----------   aaaaataatacattaaaattcaaagttcatataattggaagtaaaaagaaatttttttatcactctcaagttttgtcttaaatgggacaaatttaacttt  16579900                                                                             --------->AtMYB61                                                                             ------->GAMYB                                                                            --------->MYB46(3)                                                                            <---------MYB111(2)                                                <---------ALFIN1           -------->P                                                --------->MYB52(1)         ------>MYB46(1)                                               ----------->HVH21           ------>MYB83                                             --------->ANAC46         ------->GAMYB          <-------                                             --------->ANAC58        --------->MYB46(3)    --------->YAB1                                             --------->ANAC58     --------->MYB46(3)   <---------YAB1                                           <-----------GT1     ------->GAMYB<---------MYB55(2) ----DOF2      --------->GLK1(2) --------->ANAC58             <---------MYB52(2)     <-----------GT1 ---DAG2      <---------GLK1(2)  --------->ANAC58             --------->MYB46(3)  ------>MYB46(1) --GT1     --------->ANAC46   --------->At4g35610            <---------TOE2(3)    ------>MYB83 -GT1    ----------->RAV1(1)  <---------At4g35610    <---------MYB52(1) --------->MYB46(3)<---------YAB1   ttaaacaaaacccacagaatctcaaaccagttagcaccccttgtttcaccccacggtttgtttaacgaacaacagccaaccaccaaattactattatacc  16580000                             --------->ANAC58                          ---------->DOF2                        --------->ZAT18                          --------->AHL20(2)                        --------->ZAT14                 --------->GLK1(1)                        <---------ZAT18                <---------ARR11(3)                 <---------AHL20(2)      <---------MYB46(3)    ----------->GT1                 --------->ATHB12       <---------------------WRI1    --------->AHL20(2)                --------->AHL20(2) --------->YAB1  ---------->DOF2    <---------AHL20(2)          <-----------GT1    --------->ANAC58     *TSS --------->ARR11(3) ----GT1  >>>>>>>>>>WRKY63 <---------ALFIN1 <-----------GT1  ---------->DOF2        --------->ANAC46   ctcatcaccatttgactatttattagtccacactctatagtagttgttacattcaaagaactccaaagtaaattaaagtcttctctacttcaccataaaa  16580100                                                                                                    <                                                                                           --------->DEAR3(2)                                                                                        --------->WRKY12                                                                                        --------->WRKY38(1)                                                                                        --------->ETT(2)                                                                                        <---------ETT(2)                                 <---------MYB55(2)                                    --------->ALFIN1                                 --------->MYB46(3)                                   <-------PIF5  -                                --------->ANAC58                                      ------->PIF5  -      --------->ZAT18           ------>MYB46(1)                                       --------->LBD16      <---------ZAT18           --------->ANAC46                                     <---------O2   <     <---------ANAC58           --------->ANAC58                                     --------->O2   -     <---------ANAC58           ------>MYB83                                         <---------ANAC46     <---------ANAC46        --------->MYB46(3) ---------->DOF2                     <------NtERF2   < <---------ANAC58        <---------DAG2     --------->REM1(1)     <----------DOF2  ------>NtERF2    < <---------ANAC58        <----------DOF2   <---------ZAT14        <---------DAG2  --------->DEAR3(1)<   aatgcttgcgcacaagtctcttctctcctttaccacccaatgggctacactaatgccatctccgtctacttttctcgcctctcgcccccgtggaccggcc  16580200               --------->At4g35610               <---------ZAT2               <------NtERF2          --------->ALFIN1        <---------MYB46(3)    <------NtERF2        <---------ANAC58     <---------DEAR3(2)                     --------->LBD16        <---------ANAC58     ------>NtERF2                        <---------LBD16       <---------DEAR3(1)    <---------ATERF1(1)                  <------NtERF2      ------>NtERF2         --------->RAP2.6(2)                  --------->MYB52(1)  ------>ZmHOX2a(2)         <---------DEAR3(1)                   ------>NtERF2 <---------GLK1(1)          <---------ATERF1(2)              --------->ANAC58 <------ZmHOX2a(2)          --------->ATERF1(2)              --------->ANAC46               <-------- ---------AGP1 <---------At4g35610                           --------->ANAC58            --------->ARR11(3) -------->ARR11(3)          <---------RAP2.6(2)         <---------ALFIN1                 <---------ARR11(1) -------->ARR14(3)         --------->RAP2.6(3)          --------->ANAC58                <---------CCA1(2) -----------ARR10----------->RAV1(1)                    --------->ANAC46         <---------ARR11(3) -------->ARR14(2)         --------->ATERF1(1)     <---------ARR14(2)            --------->ARR11(3) ---------ARR14(3)        ------>NtERF2            --------->ARR14(2)            <---------ARR14(2) ---------ARR11(3)       --------->TCP20  --------->AtMYB61  --------->AtLEC2    --------->ARR14(2) ---------ARR14(2)    --------->ALFIN1 <----------ID1   --------->ANAC58       ----------->ARR10   <X   aagatctcggccgtggcagcaccagtgaggccggctctaaaacaccaaaacaaaatccacaccatgccaccggagaaaatggagatattcaaatctttag  16580300                                                                             <---------LBD16                                                                           <---------ARR14(2)                                               <-----------RAV1(1)       ----------->HVH21                                           ----------------->AGL1        --------->ANAC46                 <-----------ARR10         <-----------------AGL1       --------->MYB46(3)                 --------->ARR11(3)      <---------WRKY18(1)           <-----------------AGL1                 <---------ARR14(2)     ----------->HVH21            <-----------GT1                <---------CCA1(2)       --------->WRKY38(1)        <---------ANAC58  -------->P             <------ZmHOX2a(2)          --------->WRKY45        <----------DOF2--------->LBD16         --------->ANAC58               --------->WRKY12  --------->ANAC46 --------->ARR14(2)       < --DOF2  --------->ANAC58     --------->HSFB2a(2)      -------->P  <---------ANAC58<---------SPL7  <- XXXXXXXXXXXXXXXXXXXMIR3440B-5P        <---------MYB52(1)------->GAMYB-------->P------>NtERF2  ------   atggatgggccaaggatcaaatcttgcctcttctcaaacccgttgaccaatgttggcaacccgcttctttcttacccgacccggccttacccttctccga  16580400             ----------->GT1             <---------ANAC55(2)             --------->ANAC58             --------->ANAC55(2)             --------->ANAC58        <---------------AtSPL3       <-----------RAV1(2)     ------>MYB83     ------>MYB46(1)     -------->P    --------->ORA47(1)   --------->MYB46(3)         ------->TEIL  --------->DEAR3(2)  --------->ANAC46 -----------GT1      <-------TEIL                                                <-----------GT1 --------ZAT14      <-----------GT1                                  <-----------GT1            ----- --->LBD16  <-------TEIL   <---------YAB1                           <---------YAB1  <----------DOF2   gtttaccgaccaggtacgttatatacatcatgaatcttgttattctcttatttatgaagaagtagaagttattacaaagtttataactttgtcatgaaat  16580500                                                                                               ------                                                                  ----------->GT1              <-----                                                                --------->ARR11(3)             <-----                                                                <---------ARR11(3)            <------                                                      --------->AHL20(2)                   <------MYB83                                                      <---------AHL20(2)                   <------MYB46(1)                                                     --------->AHL20(2)                -------->HAHB4                                                     <---------ATHB12                  --------->YAB1                                                  <---------------AGL15               <---------YAB1<                                                  --------------->AGL15               --------->ICU4-                                                 ----------------->AGL3             --------->YAB1  -                               ------->TEIL      --------->MYB46(3)  <---------AHL20(2)--------->ATHB12                       <---------AHL20(2)       -------->P  ---------->DOF2        <---------YAB1   < ------>GT1           --------->AHL20(2)       --------->MYB52(1)----------->GT1 --------->YAB1<-----   gtataaaccagaatacctatactatataatatgcacattaaaccaagactaaccaataaatgaaaagatgttaaaatgtgtatttataatgataggttcg  16580600  Previous    Next  AGI:  At1g43800.1    Description:  acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative. similar to SSI2 (fatty acid biosynthesis 2), acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] (TAIR:AT2G43710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60887.1); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Fatty acid desaturase, type 2; (InterPro:IPR005067); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 16580050    to: 16582162    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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