Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <-------PIF5                                                         ------->PIF5                                                        --------->TGA1a                                                        <---------O2                                                        <---------bZIP60(2)                                                        <---------ANAC46                                                        <---------TGA1a                        --------->ICU4                  <---------ANAC58                      ---------->DOF2                   --------->O2                      ============================================bZIP_DOF          --------->ARR11(3)               ----------->GT1                                       ----          <---------ARR11(3)      <------ZmHOX2a(1)     <---------ANAC58                        <----         --------->CCA1(1)    ---------->DOF2        ----------->HVH21           <---------WOX13(1)         --------->RVE1(1)    ====================================bZIP_DOF      <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   atagtggagaaatatctcacattgaaaagatgaaaaggacttgagtagtatataagggacgtggacttctctacccattgctaattggttttgagtttga  16455800                                                                                    <---------YAB1                                                                                  <---------ICU4                                                                                 --------->ICU4                                                                                 <---------YAB1                                              <-----------GT1                   --------->TOE2(3)                                <---------ZAT14    --------->AtMYB61     --------->YAB1     ---------->DOF2  --------->MYB52(1)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ICU4 --->TEIL          --------->ANAC46 <---------------AGL15 <---------YAB1<---------ATHB12          --- -------GT1  --------->MYB46(3) --------->ZAT14 --------->REM1(1)       --------->ICU4           <---   accccatgaaagttaacaaacacaaaacgaacaccatactgaattaagttacaccatcacattatagagtcccaatgatcaacattattacacatgattt  16455900                         <---------ICU4                         --------->ATHB51                         <---------AHL20(2)                         --------->AHL20(2)                        --------->ICU4                        <---------YAB1                        --------->DAG2                      <---------ICU4                    <---------TOE2(2)                      --------->YAB1                  --------->TOE1(2)                     <---------YAB1                   --------->TOE2(2)           --------->ARR14(2)                     --------->ICU4              <-----------GT1         ------->MYC3        <-------                   --------->YAB1               <-----------GT1          ------->MYC2        <-------              <---------TOE2(3)         <---------AHL20(2)--------->YAB1 <-------MYC3        -------- ------>YAB1  <---------YAB1            --------->AHL20(2)<------ZmHOX2a(1)       <---------ARR14(2) ------YAB1  <-----------GT1 <-----------GT1   --------->AHL20(2)        <-------MYC2 <----------DOF2   tgataacttcagttttaacattgataattattttctaaacatttaaaaatttaacacctaggataaggcataccacatgctgcaaatacttttctagctg  16456000                                                                                      <---------MYB46(3)                                                                                     <---------AtMYB61    <---------ARR14(2)                                                            ----------->HVH21    <---------ARR11(3)                                                          <---------At4g35610    --------->ARR14(2)                                                          --------->LBD16    --------->ARR11(3)                                                    <---------HSFB2a(1)    <---------GLK1(2)    <-----------GT1                                  --------->HSFB2a(1) --At4g35610          <---------GLK1(2)                        <---------TOE2(3)--------->At4g35610 --ZAT2        <---------ATHB12                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ->ZAT2 <----------DOF2<---------GLK1(1)          <----------DOF2       ----------->RAV1(1)        xx   gttcaagatacttttcaatcgatggattttccatgtaatcacatagacaagacttttgtatttttaagtttttgcaacattccgctgatggtgggattgg  16456100                                          --------->ANAC46                                          --------->ANAC58                                      -----                               <-----------HVH21                                                <----                             ------>ZmHOX2a(2)                                                  -----                            <------ZmHOX2a(2)                                         <------ZmHOX2a(1)                           --------->ARR14(2)                                        <------MYB83                           <---------ARR14(2)                                        <------MYB46(1)                           <---------AGP1 --------->ANAC58                          --------->MYB59                           <---------ARR11(3)                                      <--------P  ------                           --------->ARR11(3)                                    <---------ANAC58                           --------->ARR14(3)          ---------->ID1            <---------ANAC58                           <---------ARR14(3)   <----------DOF2                  <---------ANAC46   ----------->HVH21       --------->GLK1(2)    <---------DAG2               <---------ANAC58  ------ xxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------ANAC58<<<<<<<ZML2   ggtctctaacgctgataggcatacttgaagatctgtcacaatgcaagccacttttttgtcttcacttaaaactctaagtgcttgggtaggaactagaacc  16456200                                                                     --------->YAB1                                                                ------------>CBF                                                             ------>NtERF2                                                          <---------ZAT2                                                          --------->ZAT2     ---------->DOF2        <---------ZAT6                --------->At4g35610   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   <---------At4g35610 --------->ANAC58           --------->ICU4                ----------->RAV1(2) --------->ANAC58     <---------TOE2(3)                   =================RAV ---->DREB2C(2)    <---------YAB1                      <---------At4g35610 -----ETT(1) --------->WRKY12                      --------->TOE2(3)<<<<<<<<<ARR2 ---->DEAR3(1)  <---------YAB1                     <----------DOF2  <---------ATHB12          <------ --->MYB46(3)----------->HVH21             <---------ANAC46 --------->RAP2.6(2)<---------ARR11(3) --->DEAR3(2)--------->WRKY38(1)  ------->TEIL  <-----------GT1----------->RAV1(1)    ---------->ID1   gacaagacaaaggcgatgaccattaatgtagtgatgaacttcatgtcttataactttagcagctgccacaatcaaactctagttcttcgtcttcttcttt  16456300                                                                                         <---------ANAC55(2)                                                                                         ----------->GT1                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                       <------ZmHOX2a(1)                                                                                ------->TEIL                                               <---------AHL20(2)             --------->ZAT18   <---------ANAC58  --------->GLK1(2)         ----------->TBP                <---------ZAT18      <-   <---------ANAC46 --------->ARR11(3)       <-----------TBP                  --------->ZAT14     <--   <---------ANAC58 <---------ARR11(3)   --------->TOE2(3)       ------------>CBF <----------DOF2<--- ----DOF2         <---------TOE2(3)     ----------->GT1   <---------TOE2(3)   <---------ZAT14   -----   tttttgcttagaaaacgtttgagattttgttgaaagatggaaacgttatatatatggactaatgtttttcaataggcaagtgtactttaggacgtaaatt  16456400           --------->AHL20(2)           <---------AHL20(2)          --------->YAB1          --------->AHL20(2)          <---------AHL20(2)                                                            <---------MYB59      --------->AHL20(2)                                                                --------->TOE2(3)      <---------AHL20(2)                                                                --------->TOE1(3)  <----------DOF2                                            <------------CBF        <-----------GT1 ----------GT1                                             <---------YAB1       --------->AHL20(2) ---------GT1                                           <---------AHL20(2)      <---------AHL20(2) ------AHL20(2)                                <---------ARR11(3)         <----------DOF2 ---->AHL20(2)                        ----------->HVH21 --------->AHL20(2)--------->TOE2(3)   ttatctttttaattaaaattttagagcatttcacacctatatgacacattatctatattttaatattgtggaaatactttaaaaaaataaccttactctt  16456500             ------------>CBF             --------->MYB46(3)                                                                <-----           <<<<<<<<<GT-1                                                                     xxxxxxxx           <-----------GT1                                                                  <-------TEIL      --------->ICU4                                                      --------->ANAC58 <------ZmHOX2a(2)      <---------YAB1                                                      --------->ANAC58--------->ARR11(3)      <---------AHL20(2)                     --------->AHL20(2)   --------->YAB1          <---------ARR14(2)    <---------RVE1(1)                        <---------AHL20(2)   <------ZmHOX2a(1)       --------->ARR14(2)    <---------CCA1(1)                   --------->ICU4            ================================HOX2a_HOX2a   <---------ARR11(3)           --------->AHL20(2)              <---------TOE1(3)         <---------ARR11(3)   <---------AHL20(1)          --------->AHL20(2)         <---------------AGL15           --------->AGP1   --------->AHL20(1)          <---------AHL20(2)       <---------At4g35610       <---------AHL20(2)   --------->ARR11(3)        --------->YAB1 --------->AHL20(2)  <---------TOE2(3) <-----------GT1   tgtaagatattattaaccaatgccattagaaaaataattttaaagattaaattagtttagctcattaaggataaacaagtcaatttacttaagatccatt  16456600                             <-------MYC4                       <---------AHL20(1)                             <-------MYC2                       --------->AHL20(1)                             <-------MYC3                     <---------AHL20(2)                             ------->MYC3                     <---------AHL20(1)                             ------->MYC2               --------->AHL20(2)                    xxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------ARR11(3) <---------GLK1(1)               <---------ANAC55(2)                     <---------AHL20(1) --------->GLK1(1)               --------->ANAC58                        --------->AHL20(1)--------->ARR11(3)               --------->ANAC55(2)                 --------->YAB1        <---------ARR11(3)            <---------ARR14(2)                     <---------ICU4      <---------TOE2(3)         <---      <---------LBD16   --------->AtLEC2          <---------ATHB12     <---------TOE1(3)<-----------GT1      <-----------RAV1(2)  ------->TEIL  <---------GLK1(2)   --------->YAB1    ------>ZmHOX2a(1)----- ----MYB52(1)  --------->ANAC58          --------->ARR11(3) <---------AHL20(2)--------->TOE1(3) <---- xxxxxxxxxxxxxxx>smallRNA(si3)           <---------ARR11(3)--------->AHL20(2) --------->TOE2(3) <----   tgtttttctcaggggttacgaaatctatgcacatgttgttttagattttctaatcaatatatataatatttttaagatttccttaacaatttacataaga  16456700  Previous    Next  AGI:  At1g43665.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07747.1); similar to TED4 [Zinnia elegans] (GB:BAA06462.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 16455421    to: 16456244    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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