Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ARR11(3)                                                                                        <---------ARR11(3)             ------>ZmHOX2a(1)                                                         <---------CCA1(2)            --------->TOE1(2)         --------->AHL20(2)    <---------AtLEC2        --------->LBD16           ------>ZmHOX2a(2)          <---------AHL20(2)  <---------ANAC46     <---------ARR14(2)         <---------ARR11(3)  --------->YAB1          --------->ATHB51         --------->GLK1(1)    <-------TEIL             --------->TOE1(3)      --------->ICU4            <---------GLK1(1)    ------->TEIL             --------->TOE2(3)      <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----CDC5--------->ARR11(3)------->TEIL          <---------ARR11(3) <-----------GT1--------->LBD16   agcatgtacatgatccttcgatctatatgaatcttaacatttttttatgaagacattattgtgtatggatttactcttggaaatcccgaatatctcatgt  16186200                                                                         <---------AHL20(2)                                                                   <---------ANAC58                                                                   <---------ANAC46                                              <---------AHL20(2)   <---------ANAC58--------->YAB1                                            <---------YAB1         --------->ANAC55(2)                                           <---------AHL20(2)      <---------ANAC55(2)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <----------DOF2    <-                                      <---------YAB1          <---------DEAR3(1)--------------->AGL15                                    <-----------GT1       -------->P  <---------ARR14(2)       <-----                              <---------AHL20(2)    <-------TEIL  <-------TEIL  <---------------AGL15                          <---------YAB1 <---------YAB1   ------->TEIL--------->ARR14(2)      -------   attatttgttcatactggttgtaatgctataattcattttactattattttaagttcatcaacctcggtgcgtattttttttcttttataagaaaacctt  16186300                                                 <-----------GT1                                              <---------AHL20(2)                                          --------->AHL20(2)                <-----------------AGL1                                          <---------AHL20(2)      <---------AHL20(1)              ---                                   <-----------GT1  <----------DOF2<---------AHL20(2)      --------->DOF5.7(2) --------AHL20(2)               <---------------AtSPL8            --------->AHL20(2)       <---------MYB52(1) -----DOF2------>ZmHOX2a(2)     --------------->AtSPL8            <---------AHL20(2)      --------->TOE2(3) -->TOE2(3)            <---------AHL20(2)--------->AHL20(2)  ------------>CBF             --------->TOE1(3)   ttttatttctgatccatatatatgttttattgattttgtactatttatttttttcttttgtctggcaatttttttttttttttttttggcaacgttatct  16186400        <---------TOE2(3)       ---------->DOF2      <---------AHL20(2)      --------->AHL20(2)     <---------YAB1   <--------ATHB1   <---------ICU4   --------->ATHB51                                                                                <-   --------->YAB1                                      ---------->DOF2                      <--------   <--------HAHB4                                    --------->CCA1(2)                      ---------  <---------ATHB12                                <---------TOE2(3)           ---------->DOF2 -------  <---------ATHB51<------------CBF                <---------TOE1(3)       --------->ANAC46 <---------LBD16  --------->ICU4<---------YAB1                    <---------YAB1<-----------GT1xxxxxxxxxxxxxxxxxxxxxx --------->CBF<-----------GT1                  --------->AHL20(2)         ----------->RAV1(1)--------   ggcaataattaaagtattactattgagaagaaaacaaaatagctaaaaatttaagataaaagtatttaacatgtccccacaaaagaagctattccccggg  16186500                                                                         ------------>CBF                                                                     <---------GLK1(2)                                                                    --------->ZAT2                                                                    <---------ZAT2                                                                  <---------ALFIN1                         ------>MYB46(1)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ---------DOF2           ------>MYB83                     <---------ARR11(3)            --------->ANAC58 -LBD16                <---------MYB59                    --------->ARR11(3)            --------->ANAC58 >LBD16            --------->WRKY12                       <-----------ARR10      --------->ANAC46 -->LBD16          ----------->HVH21                     --------->RVE1(1)       --------->YAB1 x>smallRNA(si3) <---------At4g35610                     --------->CCA1(1)    --------->YAB1 ->LBD16    <----------DOF2 ------>ZmHOX2a(1)  ---------->DOF2 --------->ANAC46  <---------ICU4   tctttacgttgtctctttccactgaccttcctcttctcttcttaaactctaaagacataatatctccaccagcttctcaataaacatcacaagcttcaca  16186600                     --------->TOE2(3)             <---------ICU4             <---------AHL20(2)             -------->HAHB4            <---------ATHB12            <---------YAB1            <---------ATHB51                                        --------->ALFIN1            --------->ICU4                                        <---------ANAC46          ------>MYB83                                  <---------HSFC1(2)                  ---------          ------>MYB46(1)                  <-------TEIL --------->HSFC1(2)    --------->ARR11(3)        --------->TOE2(3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ARR11(3)        <---------MYB59      ---------->DOF2<---------AtLEC2   <-----------RAV1(1)      ---------->DOF2   actccaaaaacctaattattcaaacttaaaacaaagaagatgaaatgcatggtgaagaagctactatgttgtggagccaagagcttctcccaaagagcta  16186700      --------->SPL7                                                                       ==========    ----------->HVH21                         --------->CCA1(2)                            ------>ZmHOX2a(1)    <---------SPL7                --------->ARR14(2)                           <---------ANAC58    --------->LBD16               <---------ARR14(2)                           <---------ANAC58   <--  <---------LBD16              --------->ETT(1) --------->ANAC58            --------->GLK1(1)     --- --------->MYB52(1)         <-----------RAV1(1) --------->ANAC58         <---------YAB1    ========== >ARR11(3)  <------ZmHOX2a(1)  <---------ANAC46<-------TEIL            <---------At4g35610--------->TOE2(3)   gattaccggacgaaggacgagtccgagtttatgtcggaaacgatagagatacacaatgcaagttagagatggatgctgatttcttgacacatcctttgtt  16186800              --------->GLK1(1)              <---------GLK1(1)             --------->ARR14(2)            <---------MYB52(1)           --------->LBD16         <---------LBD16        ------>ZmHOX2a(1)    ------>ZmHOX2a(2)   --------->GLK1(1)   <---------GLK1(1)   <------ZmHOX2a(2)  <---------ARR14(2)                                          <---------ANAC58  --------->ARR14(3)                                          ----------->RAV1(2)  <---------ARR14(3)                                          <---------ANAC58  --------->ARR11(3)                                      <---------ARR14(2)  <-----------ARR10                       --------->ANAC46--------->ARR14(2)  --------->ARR14(2)                      ----------->HVH21 ------>ZmHOX2a(2)  <---------ARR11(3)                     --------->SPL7  <------ZmHOX2a(1) <------ZmHOX2a(1)              <-----------HVH21      <---------TOE1(3)                            - ==========HOX2a_HOX2a         <------MYB83xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    - -------HSFB2a(2)              <------MYB46(1)     <----------DOF2                              <---- ------>HSFB2a(2)  --------->LBD16    --------->YAB1   <---------TOE2(3)<-------TEIL         ======== =========HOX2a_HOX2a         --------->MYB59<---------DEAR3(1)        --------->CCA1(2)     ------>ZmHOX2a(2)   cgaggatctcctccggttatccgaagaagagtttggtcactcatacgacggtgctttaaggatcgcctgcgagatacaagtttttctaaacttgatccat  16186900                               <---------AHL20(1)                               --------->AHL20(1)                               <---------AHL20(2)                              --------->YAB1                              --------->AHL20(2)                             <---------YAB1                            --------->AHL20(2)            --------->YAB1          --------->O2     <--------HAHB4             --------->ATHB12          --------->ANAC46 <---------ICU4           <----------DOF2       --------->ZAT18    --------->ICU4          <---------YAB1 -------->TOE1(3)         <---------YAB1         --------->ARR11(3)          <---------ANAC46     --- -------->TOE2(3)       <---------ICU4           <---------ARR11(3)        <---------MYB46(3) <------ -----MYB52(1)         ------>ZmHOX2a(1)  <---------At4g35610             <---------AtMYB61  <------- =============================HOX2a_HOX2a------->TEIL<---------YAB1  --------->YAB1          <-------   taccttaagtccacgagtcatgctcctcattattatattgatgcatctcattatctttattgataatacaatggtgatggtgggaatagaagatagcgtc  16187000                                                        <-----------GT1                                  <----------DOF2       <---------ARR11(3) --->ZmHOX2a(1)                <---------YAB1        <---------GLK1(2) ---ZAT18                   <---------AHL20(2)------>ZmHOX2a(2)                                ------ --ANAC58                   <---------YAB1  --------->ARR11(3)        <----------DOF2          <----- --ANAC58            --------->GLK1(1)      <---------ARR11(3)  <---------YAB1     ---------->DOF2   cttctcacctatgagtacttgagatttcatattattctttgaagatgatctcaaagattatctcttcttattctttattcttcaacaaagtatggaagat  16187100  Previous    Next  AGI:  At1g43040.1    Description:  auxin-responsive protein, putative. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT5G42410.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ72298.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 16186649    to: 16186963    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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