Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ANAC58                                                                             --------->ANAC46                                                                             --------->ANAC58                     --------->AHL20(2)                                   --------->MYB46(3)                     <---------AHL20(1)                                 <-----------GT1                     --------->AHL20(1)                              <---------ICU4               ------>MYB46(1)                                       --------->YAB1          --------->REM1(1)  <-----------------AGL1                 <---------YAB1    <---------ATHB12 <---------AHL20(2)                             --------->ICU4                  - ----->ZmHOX2a(2)   --------->AHL20(2)                            --------->YAB1                    - ->ZmHOX2a(1)  ------>MYB83 <-----------GT1                 ------>MYB46(1)------->GAMYB            < ---->RAV1(2)--------->MYB46(3)                             ------>MYB83<---------ICU4              <   gatccaatcgcttcaccaactaataaattttctcaattttggacagacaaaacaatgaaacctatcgataataataaccacacaaaccccaaataaaccc  15979500                                                                                       <--------P                                                                                      <---------MYB52(1)                                                                                     --------->LBD16                                                                                --------->KAN4(2)                                                                               <----------TaMYB80                                                                               --------->HSFB2a(1)                                                                               <---------KAN4(1)                                                                               <---------HSFB2a(1)                                                                               --------->KAN4(1)                                                                              --------->ARR14(2)                    --------->LBD16                                           ---------->TaMYB80      ------>ZmHOX2a(1)                                                       <---------KAN4(2)     <---------ANAC58                                                         <---------ARR14(2)     --------->TOE2(3)                                     <<<<<<<<<TBF1  <------ZmHOX2a(1)    ------     <---------ANAC58  <---------PCF5                   <<<<<<<<<TBF1    ----------->GT1     <------NtERF2 -------->At4g35610<---------HSFB2a(2)               <<<<<<<<<TBF1       --------->At4g35610--------- -------->ZAT2    <---------LBD16                 <<<<<<<<<TBF1        <-----------RAV1(2)<---------LBD16 ---------ZAT2   ----------->RAV1(2)       --------->ARR11(3)     <---------AtLEC2  <---------HSFB2a(2) ---------At4g35610--------->HSFB2a(2)     <---------ARR11(3)    <---------REM1(2) <---------LBD16   tcagcttccttatcccttcttctggggaccaaaaaaaacacagaagagcttcttcttcttcttcttctacatggcaggagaatattccggtagccggagt  15979600                   <---------ARR14(2)                   --------->ARR14(2)                    <-----------RAV1(2)                 --------->LBD16                       --------->TOE2(3)                --------->ANAC46                 --------->ANAC46         <---------GLK1(2)                      <---------HSFB2a(2)        <---------ZAT2                          --------->HSFB2a(2)    --------->ANAC46    ---------->DOF2    <----------DOF2                   <------ZmHOX2a(1) --->GLK1(1)   <---------LBD16            --------->TOE2(3)               <-----------RAV1(2) >LBD16 <---------At4g35610               --------->TOE1(3)       <-------GAMYB   tctaacacacagcttctcgcggaacttgaagctctaagtgaaaacctttaccagaaacctcaggtttcagttggaaacaggagaacaaactctctcgctc  15979700                                                               <---------ARR14(2)           <--------                                                               --------->ARR14(2)          <------NtERF2                                                            <---------TOE2(3)            <---------DEAR3(1)                                                        --------->At4g35610           <---------ZAT2                      <---------MYB46(3)                --------->ZAT2               ------>NtERF2                    <---------ANAC46                    <---------ZAT2              --------->LBD16                    <---------ANAC58                    <---------At4g35610        <------NtERF2                    <---------ANAC58                  <-------MYC3                <---------LBD16                 <---------MYB52(1)                   ------->MYC2                --------->LBD16                <-----------HVH21                     ------->MYC3                <---------ATERF1(1)               <---------ANAC58                       <-------MYC2                --------->At4g35610               <---------ANAC58 --------->At4g35610   ------->PIF5               --------->DEAR3(1)      <---------GLK1(1)         <---------At4g35610   <-------PIF5 <-----------GT1------>NtERF2      --------->GLK1(1)  <-----------GT1   <---------------AtSPL8 ----------->HVH21--------->ATERF1(1) <---------LBD16--------->LBD16 <---------ZAT2 <---------ZAT14<------ZmHOX2a(1) --------->ATERF1(1)   tccctcggagttctgttccgtcgcttgttacctctgctgatgaagtgagtacagcacgagctgaggatttgacagtatcgaagccgcgggctcggcgttt  15979800                 <---------ETT(2)               <-------GAMYB              <---------MYB46(3)             <---------DREB2C(2)             <---------ANAC58             <---------ANAC46             <---------RAP2.6(2)             <---------ANAC58                                                --------->ANAC58            <------NtERF2                  <------ZmHOX2a(1)                 --------->ANAC58          <---------DEAR3(1)            <------ZmHOX2a(1)             --------->ARR14(2)     <-------          --------->ALFIN1         --------->ALFIN1    *TSS     ----------->RAV1(1)          <------- -ANAC46 --------->LBD16        <---------TOE2(3)  ----------->GT1   <------ZmHOX2a(1)  <------ZmHOX2a(1)   atcgctgtctccgtggcggtcgagaccgaaacttgaggtagaggaggaagagaatgttactcagagcaacaggattgtcaagaaaccagaggagtcgtca  15979900                                                                     <------MYB46(1)                                                                     <------MYB83                                                           <---------MYB46(3)        --------->ALFIN1                                   <------MYB83                             -    <---------ANAC46                                       <------MYB46(1)   <---------At4g35610<----   <-------TEIL               <---------ARR14(2)<---------ARR14(2) <---------WOX13(1)      <---------MYB46(3) ----HVH21              ---------->DOF2     <---------At4g35610   <---------ARR14(2)     <---------MYB52(1) ----TGA1 ----------->HVH21   --------->ARR14(2)--------->ARR14(2)--------->ARR14(2) <---------At4g35610   tcgggttcgggtgtgaaggaagagaagaaagggatttggaattggaagccgattcgagggctggttcggattggtatgcagaagctaagctgtttgttat  15980000                      <---------HSFC1(2)                      <---------HSFB2a(1)                     --------->GLK1(2)                     --------->ARR14(2)                     <-----------ARR10                     <---------ARR14(2)                 <------NtERF2               <---------ANAC46               --------->DEAR3(1)              <------NtERF2              --------->ATERF1(1)              --------->RRTF1(1)              --------->RAP2.3(1)             <---------RRTF1(1)             <---------ERF1             <---------DEAR4(2)             <---------ATERF1(1)             <---------RAP2.6(1)             <---------RAP2.3(1)             <---------ORA47(2)             ------>NtERF2            <---------ATERF1(2)            <---------DREB2C(2)            <---------RRTF1(2)            <---------RRTF1(3)            <---------RAP2.3(3)            <---------DEAR3(1)            --------->ATERF1(2)            <---------RAP2.6(2)            <---------RAP2.3(2)            <---------ANAC58            <---------ANAC58            <---------ANAC46           <---------ABI4(1)         --------->ALFIN1                                    <---------ANAC58       --------->ALFIN1                                      <---------ANAC46       <---------MYB46(3)                                    <---------ANAC55(1)      --------->ALFIN1--------->HSFB2a(1)                    <---------ANAC58     <-------GAMYB   <---------ARR11(3)                      --------->ANAC55(2)              -------    <---------MYB46(3)--------->HSFC1(2)          <---------ANAC46                       --------->ABI4(2)   <---------AtMYB61<---------GLK1(2)          --------->ANAC46                 ---------->DOF2 -------->ALFIN1------>NtERF2                  --------->ANAC58          ----------->GT1--------->ALFIN1 -----YAB1 --------->ATERF1(1)                 --------->ANAC58    <------ZmHOX2a(1) <---------DEAR3(1)   cagtggaggttgtggcggcgcagaatcttccagcgtcgatgaatggtttacgccttggagtttgcgtgaggaagaaggaaactaaagacggtgctgttca  15980100        --------->ZAT14                                                                   <---------TOE2(3)        --------->REM1(2)                                                               ---------->DOF2        <---------ZAT14                                                            --------->SPL7       --------->ALFIN1                                                           --------->MYB52(1)     <---------ANAC58       --------->At4g35610                                  <---------SPL7     <---------ANAC58       <---------At4g35610                            --------->MYB52(1)     <---------ANAC55(1)<---------ARR14(2) <---------ARR14(3)         <-----------GT1 --------->At5g28300     <---------ANAC46   --------->ARR14(2) --------->ARR11(3)   ------->MYC3  --------->LBD16   ------>NtERF2   <---------LBD16         <---------ARR11(3)   <-------MYC3--------->DEAR3(2) -->ZAT14     <---------GLK1(1)         <------ZmHOX2a(1)    <---------ANAC46--------->DEAR3(1)   gacgatgccgtgtagggtttctcagggttctgctgattttgaggagaccttgtttatcaagtgccatgtgtattactcaccggcgaacggtaaaggtagt  15980200                                                       <---------ARR14(2)         <---------ARR14(2)                                                       --------->ARR14(2)         --------->ARR14(2)                                            <---------MYB46(3)                 <---------ANAC46                                           --------->ALFIN1                  <---------ANAC46                                          --------->LBD16                   <---------AtMYB61                                  <----------DOF2   --------->ANAC58        --------->ALFIN1       <-                               <-----------GT1      --------->ANAC58       <-------MYC3     <-------GAMYB                     <---------MYB52(1)  <---------ANAC46                  <-------MYC2     <--------                  <---------TOE1(2)      --------->DEAR3(1)                ------->MYC2<---------ANAC58              <-------TEIL    <-----------GT1       --------->ANAC46       ------->MYC3<---------ANAC58   ccagcgaagtttgaggctcgtccgtttttgttttatcttttcgccgtggatgccaaggaactggagtttggaaggcatgtggtggatttgagtgagttga  15980300                                          --------->ANAC58        <-------GAMYB                     --------->ANAC58       <------MYB83                      --------->MYB46(2)       <---------DEAR3(2)                --------->MYB59          <----------DOF2       <------MYB46(1)               <---------ZAT6 --------->CCA1(2)  <------ZmHOX2a(1)                 <---------TOE1(3)         <---------ZAT18          --------->At5g28300 ----------RAV1(2)              --------->ZAT2     <---------ARR14(2)           ---------->DOF2  <--- -At4g35610                   <------ZmHOX2a(1)    --------->ARR14(2) <---------LBD16 ----------->GT1   ttcaggagtcggtagagaagatgaattacgaaggagctagggttaggcaatgggatatgaattggggactttcagggaaggctaaagggggtgaattggc  15980400  Previous    Next  AGI:  At1g42550.1    Description:  PMI1 (PLASTID MOVEMENT IMPAIRED1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G20610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66275.1) Range:  from: 15979855    to: 15982392    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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