Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ----------->GT1                                                                        ---------->DOF2                                                                     <----------ID1               <xx   <---------MYB52(1)            ------>NtERF2                   ---------->DOF2                <xxxx ----CCA1(2)                    ----------->HVH21           --------->AHL20(2)                 <xxxxx >ZmHOX2a(1)                  --------->At4g35610          <---------AHL20(2)                  <xxxxx ---GT1                  ---------->DOF2                   --------->AHL20(2)                 <xxxxxx --GT1                ---------->DOF2                ------------------------>ANAC81          <xxxxxx   tctctgttaagaaactagtagaaaaaaagaagcgctgacacagatttataaacaaaaacaaataaataaaagcgaaaagaaacaagttgaaagttttttt  15975500                                                                       <----------DOF2       <------- xxxxxxxxxxxxxxxxxsmallRNA(si3)                             <-----------GT1              <------MYB83 xxxxxxxxxxxxxxxxsmallRNA(le3)                          <---------CCA1(1)                <------MYB46(1) xxxxxxxxxxxxxxxxsmallRNA(si3)                          <---------RVE1(1)              --------->ALFIN1 xxxxxxxxxxxxxxxsmallRNA(le3)                          --------->ARR11(3)              <--------P xxxxxxxxxxxxxxsmallRNA(le3) ------>MYB46(1)           <---------ARR11(3)      --------->GLK1(2)  --- xxxxxxxxxxxxxxxsmallRNA(si3)------>MYB83  <-----------RAV1(1)  ------>ZmHOX2a(1)   <---------TOE2(3)   ttttttttttttttttaatccaaactgaaccaaatagacatgtgaatgttgttgtgagattttttcctctgttctttgaagaatatgaggttgggattaa  15975600                             <----------DOF2                        ------>NtERF2                        --------->LBD16                       --------->ANAC46                    --------->ARR14(2)              ------->TEIL<---------ALFIN1              --------->GLK1(2)              <-----------ARR10              --------->ARR14(2)                                               --------->ARR14(2)              <---------ARR14(2)                                               <---------ARR14(2)              <---------ARR11(1)                                              <---------CCA1(2) <----             <---------GLK1(2)             <----------DOF2                  --------->YAB1<---------ICU4 --KAN4(2)   <---------ARR14(1)    <---------ANAC58               <----------DOF2    <---------WOX13(1) ------>TOE2(3)  <---------YAB1    <---------ANAC58  ------>ZmHOX2a(1)     <-------TEIL  <---------YAB1   tctcaattcatcaccgaatctgattccgccactttgttcttgcctctttcttctcctccatgccttctctttcgatattcatatctgcttgattatttct  15975700                        --------->At4g35610               <-------TEIL            --------->HSFC1(2)                              <---------AHL20(2)         <---------At4g35610                               --------->AHL20(2)       <---------HSFB2a(2)                             ------>ZmHOX2a(1)       --------->HSFB2a(2)         --------->DAG2     <---------MYB59                              <-  --------->MYB111(1)--------->At4g35610       <----------DOF2<-----------GT1                     <--  <---------MYB46(3)--------->ANAC46      ---------->DOF2  <---------AHL20(2)             --------->At5g28300 ------DOF2 <---------HSFC1(2)   ---------->DOF2    ---------->ID1       <-------TEIL    ----------->GT1   ttagtagttgcagaagcttcataagcagcaaaactaaaaggttctaaagcttttgtcctaatttaatccattcgattcatacatgttatttcggtaaatt  15975800                                                                        ------------>CBF                                                                     <------MYB83                                                                     <------MYB46(1)           <---------ANAC58                                 <---------ICU4           <---------ANAC58                                --------->ICU4          --------------->AtSPL3                           <---------YAB1          --------------->AtSPL8   <---------ANAC58 ---------->DOF2<---------WOX13(1) --------At4g35610                 <---------ANAC58--------->YAB1 <------------CBF ---------GT1             <----------DOF2  ------>ZmHOX2a(1)--------->YAB1         <----------DOF2   ttgctgtcttaattcgtaccatttctgtctttttttttcttggtcctactgaatcaaagtcatcatcagattggtccaattttagctttaagaaactcaa  15975900                             --------->ANAC58               <----------DOF2           <---------CCA1(2) --------->ANAC58                                             --------->GLK1(2)      <----------DOF2   --------->CCA1(2)                                                <---------GLK1(2)   <-----------GT1     <---------ARR14(2)      <<<<<<<<<TBF1  <----------DOF2   <---------At4g35610   <---------AHL20(2)  --------->ARR14(2) <----------DOF2<----------DOF2        --------->At4g35610   ctaatttactttcatctctttatcagatatgaagcaactctggactttcttcttcttgtctttcctttgtagtggattgttcagaagaacacattctgag  15976000                                                                                ----------->GT1                                                                 ------>ZmHOX2a(2)               --------->GLK1(2)                                <------ZmHOX2a(2)        ----------->GT1        ----------->GT1                     --------->ATHB12   <---------ARR11(3)   ---------->DOF2    --------->DAG2                         <---------MYB52(1)  --------->ARR11(3)--------->At5g28300-   ---------->DOF2                 <---------YAB1  ---------->DOF2        <---------REM1(1)         <   aaaccaaaagttgtgaaaatcggttctatattcagttttgattcagttattggcaaagttgctaagatcgctattgatgaagcagtaaaagatgtgaatt  15976100                                                                                                  ---                                                                                                  ===                                                                                                 <---                                                              <----------DOF2                    ====                                                             <----------DOF2                     ----               <---------LBD16                        <---------ZAT14                <-----------GT1               <---------At4g35610                    --------->ZAT14          <---------TOE1(3) <---               --------->At4g35610                 >>>>>>>>>MYB1         --------->ATHB12       ----- -------->ARR14(2)                                 >>>>>>>>>MYB2      <---------AtLEC2     <--------- ---------ARR14(2)                     --------->AtLEC2  <---------At4g35610   <---------TOE2(3)<----   caaatccagacattctcagcggaacaaagttttctgtttcgatgcaaaactctaactgcagcggttttatgggcatggttgaaggtttaaccctgtgaga  15976200 <----------DOF2 --->ZmHOX2a(2) =======================HOX2a_HOX2a ---ZmHOX2a(2)               --------->YAB1 =======================HOX2a_HOX2a                                          <---------TOE1(3) ----->GLK1(1)               <---------ICU4                                  <---------TOE2(3) ------GLK1(1)             <---------YAB1                        <-------GAMYB  <----------DOF2 ---->ARR11(3)   <------ZmHOX2a(1)                              --------->MYB52(2)            ------- --HVH21  <---------ZAT6<---------YAB1                          <-----------RAV1(1)          -------- -----ARR11(3) <---------TOE2(3)                                <---------MYB46(3)           <-------   tctctttagttagtgtttaggatgtcatcaatattgactcatttgtttgtttgtttgtttgtttgtttgttgcagcattgaggtttatggagaaagatat  15976300                                                                                                   --                                                                     ------->TEIL                  --                                                                   <---------ZAT14             <-----                                                                 <---------------AtSPL3        ------                                                                <---------ANAC58         ----------->HVH21                                                         <---------MYB52(2)          --------->At4g35610                                          --------->ARR11(3)    <---------ANAC46    --------->MYB52(2)     <---------YAB1                       <---------ARR11(3)    <---------ANAC58  <---------MYB52(1)- -->CCA1(2)                              <---------GLK1(1)  ------->TEIL        <---------ANAC58   <- ->ARR11(3)                              --------->GLK1(1)------->GAMYB         <---------ANAC58<---- --ARR11(3)<------ZmHOX2a(1)          <---------YAB1   --------->MYB52(1)    <----------DOF2---------   agttgggattataggaccacaatgttctgtagtagctcatatgatatctcatatggctaacgaacttcgtgtaccgcttctttcgtttgctgtaaccgat  15976400  Previous    Next  AGI:  At1g42540.1    Description:  ATGLR3.3 (Arabidopsis thaliana glutamate receptor 3.3). Identical to Glutamate receptor 3.3 precursor (GLR3.3) [Arabidopsis Thaliana] (GB:Q9C8E7); similar to GLUR2 (Glutamate receptor 2) [Arabidopsis thaliana] (TAIR:AT4G35290.1); similar to GLUR2 (Glutamate receptor 2) [Arabidopsis thaliana] (TAIR:AT4G35290.2); similar to ATGLR3.6 (Arabidopsis thaliana glutamate receptor 3.6) [Arabidopsis thaliana] (TAIR:AT3G51480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72607.1); similar to glutamate receptor [Malus hupehensis] (GB:ABO28526.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66260.1); contains InterPro domain E Range:  from: 15975929    to: 15979143    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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