Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ANAC58                       <---------ANAC58                  <---------ICU4                  --------->ATHB12                 <---------YAB1                 --------->ICU4              --------->TGA2(2)             <-----------TGA1            --------->ANAC58            --------->bZIP60(2)            --------->ANAC55(2)                                                                   <--            <---------ANAC55(2)                                                       --------->LBD16            --------->ANAC46                              <---------ICU4             <---------ANAC55(1)            --------->ANAC58                              --------->ATHB12           <---------ANAC58            ===========================================bZIP_DOF<---------ANAC58      <---------ANAC58            --------->ANAC55(1)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      ---            --------->TGA1a                            --------->YAB1     <---------ANAC58    ------- -----ANAC58--------->O2             <-----------RAV1(2) <---------YAB1   <---------ANAC58 <---------GLK1(1) -----ANAC46<---------TGA1a   xxxxxxxxxxxxxxxx>smallRNA(i)--------->ATHB51<---------ANAC46 --------->GLK1(1) -----ANAC58<---------O2<-----------HVH21    --------->DAG2    <---------ANAC58      <---------AtLEC2 -ARR10----------->HVH21--------->LBD16     ---------->DOF2    <---------ANAC46      <---------ANAC46   gagggacaaatgacacgtcatgattccgtcgcaaaatttgcaggggaaaagtccctcgcataattgcgtcgaagttgcgagaaaattgcgtggaaatcag  15964200                                                                                  <---------DAG2                                                                                  --------------->AGL15                                                                             <-----------TGA1                                      <---------ZAT14                        <-----------HVH21                                      --------->ZAT14                       =================bZIP_DOF                                      <---------ZAT18                       --------->ANAC58                                      --------->ZAT18                       --------->ANAC46                                   <---------ANAC58                         =========================                                   <---------ANAC58                         --------->O2                                   <---------ANAC46                         --------->TGA1a             ------->TEIL      --------->GLK1(1)     --------->ANAC58       <---------bZIP60(1)    --------->ANAC46           <---------GLK1(1)--------->ANAC58            --------->bZIP60(2)    --------->ANAC58          --------->ARR14(2)--------->ANAC46            --------->ANAC58    --------->ANAC58          <---------ARR14(2)--------->ANAC58            --------->bZIP60(1)   ------>ZmHOX2a(1)         xxxxxxxxxxxxxxxxxx>smallRNA(se3) <----------ID1<---------O2 -------GLK1(1)         <---------ANAC58    ==========================================bZIP_DOF    <-- ------>GLK1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC58      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -->YAB1   <-------TEIL <---------ANAC58    ---------->DOF2   <---------ETT(1)    <----------DOF2----   aattcctcgcaaatgcatcgcaaatagcgagggatttgcgtgcacaaaaaacgcctcgcaaattgcgacaaacttgcaacgtcactttattttgtagtaa  15964300                                         <-------MYC2                                         ------->MYC3                                         ------->MYC2                                         <-------MYC3                   --------->ATHB12 --------->ANAC58                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <---------ANAC58      --------->ANAC58          --------->GLK1(1)     <------MYB46(1)          <---------GLK1(1)     <------MYB83         <---------ARR14(2)     <---------ANAC55(2)     <---------At5g28300         --------->ARR14(2)     --------->ANAC55(2)    <-----------GT1       ------->GAMYB           --------->MYB59       <XXXXXXXXXXXXXXXXXXXXMIR4240      --------->ANAC58     --------->ANAC58      <---------AHL20(2)     <------MYB83 --------->ANAC46      --------->ANAC58     --------->ANAC58  --------->AHL20(2)         <------MYB46(1)        ------ ==============MYC_MYB<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------ANAC58--------->ANAC58 -------ICU4  <---------ANAC46 --------->MYB111(1)--------->AHL20(2) <---------ANAC58--------->ANAC58 ----->ICU4   <---------ANAC58 --------->MYB46(2)--------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   acattgcaacggaattgcgagtcattggcaagttaggtaagcacgttttaaataattttaccggtctagttgctaggtgaacttccctcgcaaattccta  15964400                                   ------>MYB46(1)                               -------->P                  <---------AHL20(2)                           --------->ANAC58             <---------ARR11(3)         ------>MYB83------                           --------->ANAC46 <---------ARR14(2)                     ------>MYB46(1)                     --------->ARR14(2)     --------->ARR14(2)                    ----------->RAV1(1)                     <---------ARR14(2)    --------->GLK1(1)             --------->AHL20(2)    ------                    <---------GLK1(1)  --------->ANAC58 --------->AHL20(1)       ------->GAMYB ------                    --------->GLK1(1)  --------->ANAC58 <---------AHL20(1)      --------->MYB46(3)     --------->RVE1(1)     --------->ANAC58<---------GLK1(1)  --------------->AtSPL8--------->YAB1  - >ZmHOX2a(1)   ------>ZmHOX2a(1)   ------>MYB83       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ------   gcaaaaaatatcagttcctagcaaatccctcgcaacctgcctagcaaatcccttgcaatatttttttggacctctataaataaccaacataacatttacg  15964500                                                                                     <---------ANAC58                                                                                <---------ANAC46                                                                                *TSS <---------ANAC58                                                                                <---------ANAC58                                                                                <---------ANAC58   <---------YAB1                                                          <---------ICU4 --------->YAB1                                                            --------->YAB1 --->ANAC58  <---------ICU4               <---------ICU4                  --------->ICU4 --->ANAC46  --------->YAB1           <---------AHL20(2)                --------->YAB1 --------->ALFIN1 --->ANAC58 <---------ATHB12          --------->AHL20(2)              --------->AHL20(2)     xxxxxxxx -------->ICU4                       --------->AHL20(2)            --------->AHL20(2)<---------ANAC46 --->ANAC55(2)                  --------->YAB1                 ---------->DOF2--------->ARR11(3) <xxx   aaattataactcaaatcataacatctacttacaaacaaaattaatcttttcaaaaaaaaaacttctaaagaaaataataatgtcttggggtggagagcat  15964600                                                          --------->O2                                                          --------->TGA1a                                                    --------->DAG2                                                   ---------->DOF2                                         --------->ANAC58 <---------TGA1a                                         --------->ANAC58 <---------O2                                         --------->ANAC46<------NtERF2                                       ---------->DOF2  ------>NtERF2                                       =============================bZIP_DOF                                      <------ZmHOX2a(2)<---------DEAR3(1)                                     --------->ARR11(3)<----------ID1                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             <<<<<<<<<ARR1         --------->SPL7      <---------YAB1               <                             <---------YAB1        =================bZIP_DOF                      ---                     --------------->AtSPL3       <--------P         --------->YAB1           -------                     <---------------AtSPL8       ==================MYC_MYB     <---------REM1(2) ---       --------->ANAC46      <<<<<<<<<ARR2       <-----------HVH21  <---------YAB1       <---------ANAC46   <-----------GT1   --------------->AtSPL8----------->HVH21      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxx>smallRNA(se3)--------->YAB1     <---------MYB52(1) xxxxxxxxxxxxxxxx>smallRNA(i)  --- xxxxxxxxxxxxxsmallRNA(s)    <---------ATHB12--------->MYB52(1) ----------->GT1xxxxxxxxxxxxxxxx>smallRNA(s)   gagatttacacattacgaagttggatgtacaatcatagagatcaagcgaccggtaaggcgacgagagagtattatgacagactacgcggtttcatgtatc  15964700            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)          ------->TEIL     --------->MYB52(1)   <---------MYB52(2)   --------->MYB46(3)                                                                           ----- ----------->RAV1(1)                                                                            ----- ----------ID1               ----------->GT1                    <---------ATHB12    <---------TOE2(3) ------>ANAC58              --------------->AtSPL3<---------ANAC58                <---------AHL20(2) >TEIL <---------MYB52(2)   --------------->AtSPL8<---------ANAC58     --------->ICU4   ----------->GT1 ------>ANAC46    <---------ANAC58                <---------ANAC46----------->GT1--------->AHL20(2) ------>ANAC58    <---------ANAC58   --------->AHL20(2)       --------->WOX13(1) <---------AHL20(2)   aagcgacaaacgaaccatttgctcgtgagaacggtacaatattatgtccatgtcgtaagtgtatcaatgagtaatatttggaatttaatgtagtgaataa  15964800                                             --------->TGA2(2)                                            <-----------HVH21                                            <-----------TGA1                                           <---------bZIP60(1)                                           <---------ANAC58                                           --------->ANAC58                                           <---------ANAC58                                           --------->ANAC58                                           <---------ANAC55(2)                                           --------->ANAC55(2)                                           --------->bZIP60(1)                                           <---------TGA2(1)                                      <------MYB46(1)                                      <------MYB83                                                <--       --------->YAB1                 <---------MYB46(3)                                 <xxxxxxxxxxx      <---------YAB1                 --------->MYB59                      <------ZmHOX2a(1)      xxxx  <----------DOF2                <---------YAB1                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<- ---->ANAC58            ---------->DOF2    --------->TGA2(1)   <---------ZAT6  ----------->GT1  <---- ---->ANAC58  <------ZmHOX2a(1)--------------->AGL15    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------ATHB51   gcatctttataatagaggatttatgccaaagtactatgtttggttacgtcatggagaaggttgtagagatagcgcaggaactagtaatacaaattatggt  15964900                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                       --------->ICU4                       <---------YAB1                     -------->HAHB4                     <---------ICU4                     --------->YAB1                    --------->ICU4         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <-----------------AG         ----------->GT1-------->HAHB4           <---------MYB59         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     -------->P     <---------ATHB51        --------->ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ANAC58 --------->ANAC58 --------->YAB1         <---------At4g35610                                       xx --------->ANAC58<---------YAB1         --------->ANAC58    <------MYB83      <------ZmHOX2a(1) <xxxx ----NtERF2     <---------AHL20(2)      --------->ANAC58    <------MYB46(1)  ----------->GT1   ------ xxxxxxxxxxxxsmallRNA(se3)       <---------ICU4--------->MYB52(1)     <---------KAN4(2)     <-------- xxxxxxxxxxxxxxxx>smallRNA(si3)  --------->YAB1------->TEIL--------->MYB59 <---------LBD16  xxxxxxxxx --------ANAC46 --------->AHL20(2) <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <-------TEIL -----ANAC46   --------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------ANAC46     <---------ZAT6   gtcgagcaacctagtaattttaataatgatgcgaattatggtcagcaagtacctgatcaatttggttatgggtataaccaggaaaatagagttcatgata  15965000                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                               --------->AHL20(1)                                                               <---------AHL20(2)          ------->TEIL                                         --------->AHL20(2)        <-------TEIL     --------->At4g35610                                       <---------AHL20(1) <xxxxxxxxxxxxxxxxxx     <---------At4g35610                                  ------>ZmHOX2a(1)     ------>MYB83--------- xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       --------->LBD16       ------>MYB46(1) xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <---------LBD16         ----------->RAV1(1) --->CCA1(2)       ------->TEIL                       <---------ARR14(2)      --------->MYB46(3) -YAB1  <-------TEIL                                  --------->ARR14(2)     --------->ANAC58 xxxxxxxxxxxxxx>smallRNA(se3)           ------->TEIL <---------GLK1(1)       --------->ANAC58--------   tggttacagatgcatttcatgaaactattgctgcatttcatgaaactattgctgcatttcctgaatatattagtgaagaacccaacatagatgcacaaca  15965100  Previous    Next  AGI:  At1g42520.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 5.3e-69 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 15964580    to: 15966832    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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