Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ---------->DOF2 ------ICU4                                    <---------TOE2(3) ------AHL20(2)                           <----------DOF2        <---------ANAC58   <----------DOF2 ----->AHL20(2)                     <---------ALFIN1             <---------ANAC58--------->ARR11(3) ----->ATHB51                    --------->ANAC46     ----------->HVH21    <----------DOF2 -----AHL20(2)                --------->MYB52(1)   ------->TEIL  <---------AtLEC2<---------ARR11(3)   tatttcacttacagcaaatgtttcaaaccatctatcggccactgcttttgatgtatgtgaccaatttgcatgaggctctttgaaatctttttcaaaaatg  15955700                                      ------>MYB46(1)                             <-----------HVH21                    <---------bZIP60(2)               <---------At4g35610    ------>MYB83               --------->At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <------NtERF2    --------->TOE2(3)        <---------MYB46(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                               <------  <<<<<<<<<<<<<<<<<LFY <-----------HVH21  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->AHL20(2) ----------->HVH21 <---------TOE2(3)--------->TOE1(2)<-----------HVH21        <---------ETT(2)-------   cttcggacagtggctgcaactgaggtgtcatcgtcaaacctacaaatcgagactccatcagacaaacaaaactaaatgtgtctacaaactaaatagtgaa  15955800                                                                    --------->ANAC58                                                                 <---------ZAT14                                                                 --------->ZAT14                                                 --------------->AGL15             --------->ANAC58                                                <-----------------AGL1             --------->ANAC58                                                ----------------->AGL3             --------->ANAC46                  -------->P  <-----------RAV1(2)<---------------AGL15          --------->STY1(2)               <---------ANAC58        --------->ATHB12     -------->P          <---------STY1(2)               <---------ANAC58  <------ZmHOX2a(1)      --------->ANAC46       --------->ANAC58 ---ZAT14<---------STY1(1)    <---------LBD16   <-----------------AGL3         --------->ANAC58 -->ZAT14--------->STY1(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->ANAC58   gagaacagaccctagtggcttaccagagagtaccaggaggtcgattggggtctaatttaggcaaccctgcacgaccagggctagcaagcaactcttctat  15955900                                                                                                  <--                                                                                               ------                                     <---------WOX13(1)                                      --------                                   --------->ATHB12                                --------->ATHB12                           <---------ANAC46                                  <------ZmHOX2a(1) <-----                         <---------ZAT14                                  <--------P <---------WOX13(1)                         --------->ZAT18                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                         --------->ZAT14                     <---------WOX13(1)  <---------WOX13(1)             --------->DEAR3(1)   <---------YAB1           --------->ATHB12 <------MYB46(1)  <-------           <---------At4g35610  <---------ANAC46         <---------WOX13(1) <------MYB83 ============           --------->At4g35610  <---------ZAT6       <------ZmHOX2a(1)   <---------MYB52(1) <--------  <---------At4g35610    <---------ZAT18    --------->ARR14(2)      <---------ARR14(2)   <-----------RAV1(2) --------->MYB59      <---------ANAC46      <---------ARR14(2)      --------->ARR14(2)----------->HVH21   agtcaggtcattgagccgagcatgtagtggagtagtgtgattggcagaaccgcgaggagattgattggcagaaccggtaggagattgattgacaggcgga  15956000     ----------->RAV1(1)     <<<<<<<<<<<<<<<<<LFY                                    <---------ARR14(2)  --------->ANAC58                                           --------->ARR14(2)  --------->ANAC58                                          <------NtERF2 ----ZmHOX2a(1)    <---------MYB46(3)                       <---------SPL7 --->ATERF1(1)    <---------WOX13(1)                      --------------->AtSPL3 ->ALFIN1       --------->ATHB12                <-----------------AGL1 -NtERF2     <---------ANAC58                --------->GLK1(1)                 <------ZmHOX2a(1) --DEAR3(1)  <---------ANAC58        --------->ALFIN1    ----------------------->TaNAC69(2)         < ================RAV           <---------WOX13(1)<---------LBD16   --------->ARR14(2)               - -LBD16--------->ATHB12      --------->ATHB12<---------GLK1(1)    <---------MYB52(1)            <----   ggagaagcaccattggcctgattgttggaattgattggggtttggagatttccctgagtggccgaaccgtttccttcactaggagaacgacgttgatttt  15956100                        <---------ICU4                     --------->YAB1                    --------->ICU4              <---------LBD16             <---------LBD16           <---------ARR14(2)           --------->ARR14(2)       ----------------->AGL1                                                             -----------       <-----------------AGL1                                                            --------->ANAC58 <---------ANAC46   --------->KAN4(1)         *TSS                           <---------ARR14(2) ---------At4g35610 <---------KAN4(1)        --------->AtLEC2                --------->ARR14(2) -------->At4g35610<---------KAN4(2)     --------->ARR11(3)    --------->TOE2(3)         --------->ANAC46 -------RAV1(1)--------->LBD16      <---------WOX13(1)---------->DOF2---------->DOF2     --------->ANAC58   gttgctgagaccgaaaccgggaataatcgttgccattgaatgacatcttgcaaaaaaaaagagaacattagtaaaggagaattcgaaatacaaggaaaat  15956200                                                        <---------------AGL15                                                        --------------->AGL15                                                       ------>ZmHOX2a(2)                                                       <-----------------AGL3                                                       ----------------->AGL3                                                      <------ZmHOX2a(2)         ------>ZmHOX2a(2)                                            --------->TOE2(3)                  --------->CCA1(2)                                            --------->TOE1(3)                  <------ZmHOX2a(2)                                           ----------------->AGL2             --------->ARR14(2)                                     --------->ANAC58 --------->CCA1(2)       --------->ARR11(3)                                     --------->AtLEC2<---------AGP1  --------->TOE2(3)           <---                    ------->GAMYB    --------->ANAC46<---------ARR11(3)       <---------ARR11(3) ----   --------->HSFB2a(2)               --------->ANAC58--------->ARR11(3)       --------->AGP1     ----   <---------HSFB2a(2)      <---------TOE2(3)        --------->ARR14(2)       <---------AGP1     <--- >GT1    ------->GAMYB     --------->MYB52(1)        --------->AGP1  --------->TOE1(3)       ------->GAMYB   tagttctacaacgaaaatacaacgaaaattaacgaatacaagcaaaccctaattagatctacaaatagaaaccctaattagatctacaaatacaacgaaa  15956300                                                                       <---------------AGL15                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------------->AGL15                            ------>ZmHOX2a(2)                         ------>ZmHOX2a(2)                           --------->CCA1(2)                          <-----------------AGL3                           <------ZmHOX2a(2)                          ----------------->AGL3                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------AGP1          --------->ANAC58<---------ARR11(3)                        --------->ARR14(2)          --------->ANAC46--------->ARR14(2)                        <---------ARR11(3)          --------->AtLEC2--------->AGP1      --------->LBD16       --------->ARR11(3)          --------->ANAC58--------->ARR11(3) ------->GAMYB --------->TOE2(3) ------AHL20(1)           <---------AGP1    <---------LBD16--------->TOE1(3)    <---------GLK1(2) ----->AHL20(1)  --------->TOE1(3)         --------->MYB52(1)       --------->AGP1 ----->ARR11(3)  --------->TOE2(3) --------->YAB1    --------->ANAC58<------ZmHOX2a(2) ------ARR11(3) ----------------->AGL2     -------->P--------->ANAC58--------->CCA1(2)   <-------TEIL   atattcgaatacaagcaaaccctaattagatctacaatgaaaatcaaccggaatcaagaaaccctaattagatctacaaatagaaactcgattcatacag  15956400                                                                                    <---------MYB52(2)                                                                                 ----------->HVH21                                                                                 <---------DEAR3(1)                                                                                 --------->DEAR3(1)                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                                --------->RAP2.3(1)                                                                               <---------RAP2.6(1)                                                                               <---------RRTF1(1)                                                                               <---------ERF1                                                                               <---------DEAR4(2)                                                                               ------>NtERF2                                                                               <---------ATERF1(1)                                                                               <---------ORA47(2)                                                                               <---------RAP2.3(1)                                                                              <---------ANAC46                                                                              <---------RRTF1(3)                                                                              <---------DEAR3(1)                                                                              <---------RAP2.3(3)                                                                              <---------RAP2.3(2)                                                                              --------->DEAR3(1)                                                                             --------->ATERF1(1)                                                                             <---------ABI4(1)                                                                            <---------DEAR4(2)                                                                            <---------ATERF1(1)                                                                            <---------ORA47(2)                                                                            <---------RAP2.3(1)   ---                                                                           <---------RAP2.3(3)    ---                                                                           <---------DEAR3(1)     ---                                                              =======================================                                --------->At4g35610           <----------DOF2<------NtERF2        ---                             <------ZmHOX2a(2)         <---------ICU4     --------->SPL7          ---                            <---------ARR11(3)    ----------->GT1      <-----------RAV1(2)        ---            --------->ZAT6  --------->ARR11(3) <---------AtLEC2        <---------HSFB2a(2)  =========     xxxxxxxxxxxxxxxx>smallRNA(i)              <---------ANAC58        --------->HSFB2a(2)  <--------P     XXXXXXXXXXXXXXXXXXXX>MIR869.1             <---------ANAC46   <---------ANAC58 <------NtERF2  --- <-----------GT1        ---------->DOF2        <---------ANAC58   <---------ANAC58------>NtERF2<-----   attaaaccgattcaactctagggtttgaaagatcaactcaaaaatcgttgcatggaaacattacctttgggttccagacggcggcgacgaacaggtagac  15956500                                                <------NtERF2                                               ------>NtERF2                                              ----------->HVH21                                              --------->DEAR3(1)                            <--------                                              <---------DEAR3(1)                      <---------ANAC46                                             --------->ATERF1(1)                     <------NtERF2                                             --------->RAP2.3(1)                     --------->RAP2.3(1)                                             <------NtERF2                           --------->ATERF1(1)                                            <---------DEAR4(2)                      <---------ERF1                                            <---------RRTF1(1)                      <---------DEAR4(2)                                            <---------ORA47(2)                      ------>NtERF2                                            <---------RAP2.6(1)                     <---------ATERF1(1)                                            ------>NtERF2                           <---------RAP2.3(1)                                            <---------ATERF1(1)                     <---------ORA47(2)                                            <---------RAP2.3(1)                    <---------DEAR3(1)                                            <---------ERF1                         <---------RAP2.3(2)                                           <---------RAP2.3(3)                     <---------RAP2.3(3)                                           <---------ANAC46                        <---------RRTF1(3)                                           <---------RAP2.3(2)                     <---------ANAC46                                           <---------RRTF1(3)                      --------->DEAR3(1)                                           --------->DEAR3(1)                     --------->ATERF1(1)        <------ZmHOX2a(1)                  <---------DEAR3(1)                     <---------ABI4(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <------NtERF2                           <------NtERF2   <------NtERF2                          --------->ATERF1(1)                    <---------ATERF1(1) ------>ANAC58                            <---------ABI4(1)                      <---------DEAR4(2) ------>O2                               <---------DEAR4(2)                      <---------RAP2.3(1) ------>bZIP60(2)                        <---------ORA47(2)                      <---------ORA47(2) =======bZIP_DOF                         <---------RAP2.3(1)            --------->At4g35610--------->ARR11(3) ------>ANAC58  --------->ANAC46         <---------ATERF1(1)  <------NtERF2     <---------RAP2.3(3) ------>ANAC46  --------->ANAC58        <---------RAP2.3(3)   --------->ALFIN1  <---------DEAR3(1) ------>ANAC55(1)   <------NtERF2       <---------DEAR3(1)  <---------ANAC58   --------->SPL7 =======MYC_MYB <---------ANAC55(2)    --------->SPL7       <---------ANAC46--------->HSFB2a(2) ------>TGA1a   --------->ANAC55(2) --------->HSFB2a(2)     <---------ANAC58<-----------RAV1(2) ----REM1(2)    --------->ANAC58    <---------HSFB2a(2) <-----------RAV1(2) <---------HSFB2a(2)     -   acggcagagaggatgaacacgcgtcgatgaaatctattccagacggcggcgacgaagaacaggcgtggatgagaagctccagacggcggcgaagatgtag  15956600  Previous    Next  AGI:  At1g42500.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 1.8e-101 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 15953815    to: 15956146    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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