Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------YAB1                <---------AHL20(2)                --------->YAB1       <-----------GT1    <---------ICU4   --------->AHL20(1)   --------->AHL20(2)    <---------MYB52(1)                          --------->DOF5.7(2)   <---------AHL20(2)  <---------ANAC58                             --------->TOE2(3)--------->ARR14(2)  --------->AHL20(2)   <---------ANAC46                       <-----------GT1        <---------ARR14(2) ------>AHL20(2)--------->AHL20(2)                        <---------AHL20(2)      xxxxxxxxxxxxxxxx>smallRNA(i) ------>YAB1 --------->YAB1                               --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->YAB1<---------YAB1<---------ANAC58                 <----------DOF2<---------DOF5.7(2)         --   taaaaaaaattacgatattaatattccgtttatttgctctgttagaacaaattatcgtcttttattacgacgttaatgtctcgtccgtatttgttttgcg  15893400                                         --------->YAB1                                         <---------ICU4                                        <---------YAB1                                     --------->AHL20(2)                                     --------->AHL20(1)                                     <---------AHL20(1)                                     <---------AHL20(2)                                 --------->YAB1                                 <---------ICU4                          ----------->GT1                                <---------ATHB12                     <---------AHL20(2)                              <-----------GT1                        --------->AHL20(2)                              --------->WOX13(1)                    --------->YAB1                             --------->AHL20(2)                    <---------YAB1        <---------YAB1                             <---------AHL20(2)            --------------->AGL15 --------->ICU4                            --------->AHL20(2)             ==========================================                         --------->AHL20(1)               <---------ANAC46     --------->YAB1                         --------->AHL20(2)   <---------YAB1    --------->AHL20(2)<---------ICU4                         <---------AHL20(2)  <---------AHL20(2) <---------AHL20(2)--------->YAB1                        --------->AHL20(2)   <---------AHL20(1) <---------YAB1 <---------ICU4      <----------DOF2   <---------AHL20(2) <---------YAB1 <---------ANAC58    <---------YAB1       <- ------->AHL20(2) ----------->GT1<--------HAHB4           <---------ANAC58    --------->ICU4  -------   attttatacttttagttggattttaaaaaaattaatcattttattattatttttagagttgcttatattattaaaatgttataattatgttcttatttat  15893500                                                                      <--------P                                                                      <---------WOX13(1)                                    --------->AHL20(1)  --------->LBD16                                    <---------AHL20(1) <---------ANAC46                       <---------AHL20(2)              <---------ANAC58                  --------->ICU4    <---------AHL20(2) <---------ANAC58             --------------->AGL15  --------->AHL20(2) <---------ANAC55(2)          ------>ZmHOX2a(2)     <---------AHL20(2)     <---------ANAC55(1)              --------->ZAT14        --------->ARR11(3)     --------->AHL20(2)      --------->ANAC55(2)              <---------ZAT18     --------->SPL7   --------->AHL20(2)              ------>ZmHOX2a(2)    ------>ZmHOX2a(2) ============================MADS_MADS   <---------AHL20(2)     ------->TEIL            <---------ZAT14 ----------GT1 --------->AHL20(2)--------->YAB1  <---------WOX13(1)<xxxxxxxxxxxxxxxxsmallRNA(s) -->YAB1<---------ARR11(3) <-------TEIL  --------->AHL20(2)  ------>ZmHOX2a(2)        ---------------   aaaaccgtatgatctctataaatattaaatacatataataaattttaatggattgatccgtgatcgaacctggttgatccagtaactcagtgtaccaaaa  15893600                 --------->LBD16                <---------ANAC46                                     <---------ICU4               --------->SPL7                                        -------->HAHB4               <---------LBD16                              <-----------HVH21 XXXXXXXXXXXXXXXXXXX>MIR156G             <---------SPL7                        --------->YAB1    --------->ATHB12             <-----------HVH21                    <---------YAB1     --------->YAB1            --------->DEAR3(1)                  --------->YAB1      --------->ICU4 --------->AHL20(2)          <---------At5g28300                <------ZmHOX2a(1)      <---------ATHB12   --------->AHL20(2) >AtSPL8 <-----------GT1           <---------At5g28300     --------->YAB1 <----------ID1    ---------   catagtccgattcaccgtccgggtattgttcaaaattcactgctacaggataatcatacaattgtcacaaatgattacaacaaaaaaaaataaacaaagg  15893700                                                       --------->AHL20(2)                                                  ------------>CBF                                               --------->ANAC58                                        --------->YAB1 <---------AHL20(2)                                       --------->AHL20(2)                                      --------->AHL20(2)<---------AHL20(2)                                      <---------AHL20(2)--------->AHL20(2)                                   <---------AHL20(2)  <---------AHL20(1)             <---------ALFIN1   ----------->GT1--------->ANAC46            <---------ZAT14   <---------MYB52(1) --------->ANAC46            --------->ZAT14  --------->TOE2(3) --------->ANAC58        <-----------GT1    <-------TEIL<---------AHL20(2)   --------->AHL20(2)                      <     --------->YAB1      --------->TOE2(2) --------->YAB1   --------->YAB1                  ------>ZmHOX2a(1) ->DOF2 <---------ICU4   --------->TOE1(2) -------->HAHB4   <---------AHL20(2)       <-----------GT1<   aagattagaataactacactcgcttaacatacgttagtaaattaataatacgcccaatttaattaaaactcgttttttcagaatataaaacctcctctcg  15893800                                                                                        --------->HSFB2a(2)                                                                          --------->ANAC58                                                                          --------->ANAC46   <-------                                                                          --------->ANAC58   <------- ---------DAG2                                 --------->ZAT14           --------->LBD16<---------HSFB2a(2) ----------DOF2 *TSS                       <---------ALFIN1  <----------DOF2 ------->TEIL    --------   ggctttttcttctctacttggactgaaactgaaactgaaactgaaacacttctctctctctctctttctcgcttccacgaatcgagagttctacaaattc  15893900                                                                         --------->LBD16                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                       <---------LBD16                                                                    <---------At4g35610                                                                    --------->At4g35610                                                                    --------->ZAT2                                                                    <---------ZAT2                                                                <------NtERF2                                                                --------->ATERF1(1)                                                               <<<<<<<<<AtERF-3                                                               <<<<<<<<<AtERF-4                                                               <---------ERF1                                                               ------>NtERF2                                                               <---------RAP2.3(1)                                                               <<<<<<<<<AtERF-5                                                               <<<<<<<<<AtERF-1                                                               <---------MYB46(3)                                                               <<<<<<<<<AtERF-2                                                              <---------RAP2.3(2)        <---------GLK1(1)                                     <---------RAP2.3(3)    <---------TOE1(2)                                         <---------DEAR3(1)   ------>ZmHOX2a(1)                            --------->WOX13(1) ----------->ARR10 --ARR14(2)                               <---------ANAC46    <---------RAP2.6(2)                   - --GLK1(2)                                <---------ANAC58    <---------ANAC46        <---------HSFB2a(2) ->ARR14(2)                               <---------ANAC58   --------->RAP2.6(3)      --------->HSFB2a(2)   gcttcctagggtttctcaattcttctaatttcttcatttctatggcgagtcaatgagcgaaatggcggctagctccgcaatctctcttctcgatatcaaa  15894000                      <---------MYB52(2)                     --------->ANAC46                     --------->ANAC58                                        ------>NtERF2                     --------->ANAC58                                       ----------->HVH21                <------NtERF2                                               --------->DEAR3(1)              --------->ALFIN1                                          <---------At4g35610             --------->ATERF1(1)                                        --------->At4g35610==========            <-------GAMYB                        <---------MYB46(3)     --------->ZAT2     <---------At4g35610           <---------DEAR3(1)                    ----------->GT1        --------->GLK1(1)  ----------        <---------DEAR3(1)               --------->MYB52(1)             <---------GLK1(1)<-----------GT1     --------->ARR14(2)                <---------MYB46(2)               <---------ZAT2  <-------TEIL     <---------ARR14(2)                <---------MYB59                <------NtERF2   <---------ARR14(2) ------>NtERF2<---------DEAR3(1)     ------>NtERF2                   --------->LBD16  --------->ARR14(2) -------->DEAR3(1) <------NtERF2    <---------ANAC46               <---------LBD16  ----------->ARR10   ctccgacgattcggcgttggcgcaagtaaccatgaattgcgcctaactaagtggttcaaaggtgatcaagccggagctccgacgagaagattcacctgct  15894100                                                                                --------->LBD16                                                                                <---------RAP2.6(3)                                                                               <---------ANAC46                                                                              <---------LBD16                                                                              <------NtERF2                                                                             ------>NtERF2                                                                            --------->ALFIN1                 <---------ARR14(2)                                         <---------DEAR3(1)                 <---------GLK1(2)                                       --------->ANAC46                 --------->ARR14(2)                                   ----------->HVH21              <------NtERF2                    <---------ANAC46     --------->ZAT14      <-----------RAV1(1)                 --------->ARR14(2)        --------->ZAT18    --------->CCA1(2)                     <---------ARR14(2)        <---------ZAT18   <---------ARR14(2)                     --------->MYB52(1)        <---------ZAT14   <---------ARR11(3)                 <---------At4g35610           --------->At4g35610   --------->ARR14(2)   ------>NtERF2 --------->At4g35610           <---------At4g35610 =================RAV  --------->DEAR3(1)<------ZmHOX2a(1)       <---------ANAC58    --------->YAB1 ->RAV1(2)   ------>NtERF2        <-----------HVH21              <---------ANAC58<------NtERF2    ---   tcgcagatatgttggcaccgattcgccgctctgagaagtcagaggaacggcgttttgatcagaagatgagtgctcacggtgccggaatcaaaacttcttc  15894200                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   <-                                              <---------LBD16                                      <-                                        --------------->AGL15                                      <-                                        <---------------AGL15                                      --                                    <---------CCA1(2)                                              <-              <---------ANAC58     ------>ZmHOX2a(1)                                               --              <---------ANAC58    <---------ANAC58  --------->KAN4(1)                              <- <---------ZAT14                  <---------ANAC58  <---------HSFB2a(1)                           --- --------->ZAT14                  --------->TOE2(3)<---------KAN4(2)                              <-- --->ZmHOX2a(1)      ------>ZmHOX2a(1)  <----------DOF2<-------TEIL                               <--   ctctgcagtgccatttgcttctcctaagtaagacttccttatcttttatggggaatgttcatgtgagtgtttttgttttcaattgttgtttttttttggc  15894300  Previous    Next  AGI:  At1g42430.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55760.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55760.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62020.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05510.1); similar to hypothetical protein OsI_009645 [Oryza sativa (indica cultivar-group)] (GB:EAY88412.1) Range:  from: 15893816    to: 15896884    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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