Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <xxxxxxxxxxxxxxxxsmallRNA(i)           --------->ATHB12           <---------MYB46(3)          <---------YAB1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       --------->ALFIN1                                                                    <xxxxxxxxx      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              --------->ANAC58               <---------ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <-----------HVH21                  --------->ARR14(2)     --------->ZAT2                       <---------ARR14(2)                           <xxxxxxxxxxxxx     <---------ZAT2           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 <xxxxxxxxxxxxxxxx    <---------TOE1(2)        <---------GLK1(2)     <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->ZAT2   <-----------RAV1(2)  ----------->GT1   --------->ARR14(2)              --------->MYB46(3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ARR11(3) --------->ANAC58     <---------ZAT2    -  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->LBD16  --------->ANAC58 <---------MYB52(2)    <---- -------ICU4   xxxxxxxxxxxxxxxx>smallRNA(s)       <----------DOF2      <----------ID1  <xxxxxxxxxxxxx ------>YAB1   xxxxxxxxxxxxxxxx>smallRNA(i)--------->CCA1(2) --------->ANAC58 --------->ANAC46  <---- ------ATHB12<---------WOX13(1)        --------->HSFB2a(2)--------->MYB46(3)--------->MYB52(1)  -----   tcatcccaggtggtgattgagtcatggggcaaattcttctcccagatatgtgctttgtcacccaaggaaaatgggaacaaacggagcttgaatccgtctt  15835500                                                                 ------>ZmHOX2a(1)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               ------>ZmHOX2a(2)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                              <------ZmHOX2a(2)                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                             --------->ARR14(2)                                                           ----------->ARR10<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <------MYB46(1)                      --------->ALFIN1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <---------AtMYB61                     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    --------->MYB111(1)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    --------->MYB46(2)                  <---------ANAC46    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    --------->MYB59                <---------MYB46(3)      --------->ANAC58                    --------->MYB52(2)            <---------AtMYB61        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       --------->ALFIN1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        xxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --------->bZIP60(1)                       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxsmallRNA(i)<---------MYB55(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxxxxxxxsmallRNA(se3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ARR14(2) xxxxxxxsmallRNA(fl3)<------MYB83          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      - ---------->HVH21 <---------MYB52(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 ------- -----REM1(2)------>ZmHOX2a(2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------- -----ZAT14<---------ARR11(3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->ANAC58  <------- ---->ZAT14--------->ARR11(3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ATHB12         <xxxxxxxx   cactgacaccattgatcttcgttaggttgcagagcctatcgaattcatcaaggtggtcgagtggatcctccattggcaaaccatggaatttgttcccctg  15835600                                                                                             <xxxxxxx                                                                                           xxxxxxxxxx                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                                                    --------->ALFIN1                                                                                   ------->MYC3                                                                                   <-------MYC2                                                                                   <-------PIF5                                                                                   <-------MYC3                                                                                   ------->PIF5                                                                                   ------->MYC2                                                                                  <---------ANAC46                                                                                  <---------TGA1a                                                                                  <---------bZIP60(2)                                                                                  --------->TGA1a                                                                                  --------->O2                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC55(2)                                                                                  <---------O2                                        <---------HSFB2a(2)                     xxxxxxxxxxxxxxxxxxxxx                                        --------->HSFB2a(2)                     xxxxxxxxxxxxxxxxxxxxx                                       <---------LBD16                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  <---------YAB1       <-------TEIL          xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(s)     xxxxxxxxxxxxxxxx>smallRNA(s) -------->YAB1           --------->HSFB2a(2)          --------->ALFIN1      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->LBD16                <---------HSFB2a(2)      <------ZmHOX2a(1)        --------->At5g28300 --->RAV1(2)      --------->YAB1----------->GT1<-----------RAV1(2)     --------->MYB52(1)  <xxxxxxxxx --LBD16       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ALFIN1   ----------->HVH21   ------->TEIL xxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ------>ZmHOX2a(1)   <-------TEIL   aatcatcgagatgagaccactcttaatctcgaagttgttattctggatagcaggaggtgcgattcccttcctctaacggtgatcacgtggtgcatctcca  15835700                                                           <---------TOE2(3)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                        <---------ANAC46                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       <---------At4g35610          <---------ANAC58                             --------->At4g35610           <---------DAG2          <---------ANAC58                            <---------MYB46(3)     <---------MYB46(3)          <---------AtLEC2                           <--------P           <-----------RAV1(1)    <-----------RAV1(1)                              xxxxxxxxxxxxxxxx>smallRNA(s)    <----------DOF2 xxxxxxxxxxxxxsmallRNA(i2)                         <---------MYB46(3)  <---------WRKY18(1)         -- xxxxxxxxxxxxx>smallRNA(se3)                       --------->MYB55(2) ----------->HVH21           <-- >smallRNA(se3)           <---------GLK1(2)       <---------AtMYB61   --------->WRKY38(1)        <--- >smallRNA(si3)       <---------At4g35610         --------->ALFIN1    --------->WRKY12     <---------YAB1 xxxxxxxxxxxxxxsmallRNA(fl3)                --------->MYB52(1) <-------TEILxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   gcaccaatgttggcatggccattttgctgattctgttcttcagccataacgagtggttgctgaggtacagggttgactgtggttctcctttttctgattt  15835800                                                                                    <------ZmHOX2a(2)                                                                               <---------LBD16                                            <---------ANAC58                  ----------->RAV1(2)           <--------P                       <---------ANAC58                 ------->TEIL          <-------GAMYB                     <---------ANAC46              <---------REM1(1)         <---------MYB46(3)        <---------ARR14(2)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         ----------->GT1           --------->GLK1(2)               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------RAP2.6(2)      <---------HSFC1(2)                *TSS   --------->ALFIN1       <---------ZAT18           --------->HSFB2a(1)               xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      --------->ALFIN1           --------->HSFC1(2)                <---------At4g35610    <----------DOF2        ---------->DOF2  <---------AtLEC2xxxxxxxxxxxxxxxx>smallRNA(i)   <---------DEAR3(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->At4g35610 ------>NtERF2        <-------GAMYB--------->ARR14(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --- ------------>OsCBT  <---------MYB46(3)  <--------P      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --- -------LBD16        <---------ANAC46 <---------YAB1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <------- ------ANAC46 --------->ARR11(3) <---------HSFB2a(1) ------>ZmHOX2a(2) <---------AtMYB61---------->DOF2   cgcgggctgtgcggttgatattgtcgttgaaaaggaggttctggttgcatgttgatcgagttcgcatacagcagaggtgtacctggatcaaaaagacaac  15835900                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  xxx                                                                                                  <--                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                xxxxx                                                                                             <xxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                            --------->MYB46(3)  xxxxx                                                                            <---------MYB52(2)  -----                                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                              --------->GLK1(1)  <xxxxxxxxxxxxxxxxsmallRNA(i)                         ----------->GT1                      <---------GLK1(1)xxxxxxxxxxxxxxxxxxxxxx                 --------->MYB52(1)                    <xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxx              <---------ANAC55(2)                     <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxx              --------->ANAC55(2)                  --------->ANAC58        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->At5g28300                     --------->ANAC58        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------>ANAC58--------->ANAC58  ----------->GT1    --------->ANAC46    ----------->GT1<xxxxxxxxxxxxxx ------>ANAC58--------->ANAC58<------------CBF  ------>ZmHOX2a(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---ID1--------->ANAC46---------->DOF2        <---------ARR11(3) --------->TOE2(3) <xxxxxxxxxxxxxxxxx   aagaaaaacacacagtaagtaactgaaaagaaaattgaaaaacaacttgatctaagcaagtctgaaatctcaaatgtaacaaacaaacacccaattggca  15836000                                                                                             xxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          --------->ALFIN1                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      <---------ANAC58                                                                                      xxxxxxxxxxxxxxx                                                                                      <---------ANAC58                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             --------->YAB1                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->YAB1                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         ----------->GT1                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <------NtERF2                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      -  ------>NtERF2                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     -- --------->DEAR3(1)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxx -------->RAP2.3(1)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxx --------ATERF1(1)                               --------->YAB1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------RAP2.3(1)                               <---------ICU4        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----->GAMYB<---------YAB1                      <---------ATHB12       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxx>smallRNA(s2)              ------>MYB83  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xx -------DEAR3(1)                               ------>MYB46(1)      --------->MYB59xxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxx>smallRNA(le3)            --------->WOX13(1)    <---------TOE1(3)xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(fl3)              <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxx>smallRNA(si3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxx xxxxxxxxxsmallRNA(s)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxx xxxxxxxxsmallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(fl3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxx ---->MYB52(1)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) x>smallRNA(fl3)                        <xxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxsmallRNA(le3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxx>smallRNA(se3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->WOX13(1)  xxxxx xxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxsmallRNA(le3)                 ------>ZmHOX2a(1) <-------GAMYB<---------TOE2(3)xxxxxxxxxxxxxxxx   acggcgccaaattgataataagtttttaagtcaattgtcctaaaacaccaatcatgtcgttgtagtattttaggttgtcaatccaaatgggtgtgatgct  15836100                                              xxxxxxxxxxxxxxxx>smallRNA(i)                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------ARR11(3)            xxxxxxxxxxxxxxxx>smallRNA(i)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->YAB1                    <---------ATHB12  <---------ATHB12                  --------->ANAC58 xxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxx>smallRNA(se3)         --------->ANAC46 xxxxxxxxxxxx>smallRNA(fl3)         --------->AtLEC2         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxx>smallRNA(si3)          --------->ANAC58         <---------HSFB2a(2) xxxxxxxxxxx>smallRNA(se3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxx>smallRNA(le3)            <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxx>smallRNA(si3)           xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxx>smallRNA(fl3)       --------->WRKY18(1)              >>>>>>>ZML2 xxx>smallRNA(se3)         <xxxxxxxxxxxxxxxxsmallRNA(i)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxx>smallRNA(si3)        <xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -------->WOX13(1)     <xxxxxxxxxxxxxxxxsmallRNA(i)     xxxxxxxxxxxxxxxx>smallRNA(i) ------->MYB46(3)     <xxxxxxxxxxxxxxxxsmallRNA(s)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxx>smallRNA(si3)  --------->ANAC58        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxx>smallRNA(se3)  --------->ANAC58xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(i)     <---------ANAC46  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(i) <---------AtMYB61<xxxxxxxxxxxxxxxxsmallRNA(i) xxx>smallRNA(si3)  xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------ANAC58------>ZmHOX2a(1) xx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------ANAC58<xxxxxxxxxxxxxxxxsmallRNA(i) >smallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) >smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(i)--------->HSFB2a(2)          ----------- xxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(s)    --------->AtLEC2   aacaatcaagatgtgatcagaagtcactaagtcaagccaagcaataacaggttttggtgtgttctagcagtcctaagtgaacatgcagaaaacagaaaat  15836200                          <---------ALFIN1                         ------>MYB83                         ------>MYB46(1)                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                        ----------->RAV1(1)                       --------->AtMYB61                      --------->MYB46(3)  <---------ZAT14                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     xxxxxxxxxxxxxxxx>smallRNA(s)                           ------->GAMYB                    xxxxxxxxxxxxxxxx>smallRNA(s)                           --------->MYB46(3)                    <xxxxxxxxxxxxxxxxsmallRNA(s)                         --------->MYB52(1)                 <<<<<<<<<TAC1            --------->ZAT14               <xxxxxxxxxxxxxxxxsmallRNA(i)                 --------->ANAC46         <---------ZAT18       <xxxxxxxxxxxxxxxxsmallRNA(i)  xxxxxxx              --------->ZAT14     <----------DOF2   --------->MYB59    <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ZAT18   ----------->HVH21              xxxxxxxxxx >GT1         <---------ZAT18 <---------At4g35610   <---------AtMYB61 <xxxxxxxxxxxxxxxxsmallRNA(s)   caaacagaaacagtagaacactcgaccaacacagctctttgcagagcactgagtgaggtcgagtgacaagtcgagtaacagacagaaaatgaaacagagg  15836300                                                                                           <------ZmHOX2a(1)                                                                                         <xxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                     ----------->HVH21                                 <------MYB46(1)                                    <-----------HVH21                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <---------ANAC55(2)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    --------->At4g35610                         --------->AtMYB61                                       <-----------RAV1(2)               <-------GAMYB     <------MYB83                                    xxxxxxxxxxxxxxxxxxxx               <---------At4g35610                                              xxxxxxxxxxxxxxxxxxxxx               --------->At4g35610                                             xxxxxxxxxxxxxxxxxxxxxx              <-----------RAV1(1)<---------MYB46(3)                            ----------->RAV1(1) <-              <---------MYB46(3)<---------AtMYB61                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            --------->ANAC58       --          <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <xxxxxxxxxxxxxxxxsmallRNA(i)         <xxxxxxxxxxxxxxxxsmallRNA(s)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxx>smallRNA(s)      <-----------RAV1(2)<---------ICU4--------->ANAC46      <xx         xxxxxxxxxxxxxxxx>smallRNA(i)     ----------------->AGL1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->ZAT18   --------->ZAT14   <---------TOE1(1)  --------->ICU4 --------->ANAC58    -----      <---------ZAT14   <---------ZAT14  xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxx>smallRNA(le3)   --------->ALFIN1       --------->ZAT6xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxx>smallRNA(se3)  <---------MYB46(3)      --------->MYB52(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   tactcgattgcacagtctgttgccagaccactgggtggtcgagtaccaggtcgagtaacagtaagaattgcagaaactaagcaacaggtgacaggatgca  15836400  Previous    Next  AGI:  At1g42365.1    Description:  transposable element gene. gypsy-like retrotransposon family (Athila), has a 9.0e-234 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana) Range:  from: 15830137    to: 15835867    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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