Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->ANAC58                             --------->ANAC46                    <---------HSFC1(2)                             --------->ANAC58                    --------->HSFC1(2)                           --------->ANAC46                     ------>MYB83                         --------->ANAC46                       ------>MYB46(1)                <----- --------->GLK1(2)   --------->YAB1                          --------->MYB46(3)                ------ -------ANAC58      <---------ATHB12                        -------->P    ------>ZmHOX2a(1)  xxxxxxxx -------ANAC58    --------->WOX13(1)      --------->ICU4   --------->MYB52(1)          <----------DOF2 ----RAV1(1)   --------->ANAC46  --------->ARR11(3)      <---------MYB52(2)        xxxxxxxxxxxxxxxxxx   gcgattctaagtcttatactcaatcatacacaagacatcttgtcatatttgactagaaaactaaccaagcttcttcctgcttctcaaaactttgatggtg  14546600                                                                                              -------                                                                                        <xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      <---------YAB1                                                       <---------YAB1 --------->At4g35610   <xxxxxxxx                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              xxxxxxxxxxxxxxx                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<---------At4g35610xxxxxxxxxxxx                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxx                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------ANAC58  <xxxxxxxx                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ANAC46  xxxxxxxxx                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<-------GAMYB<---------ARR11(3)        <---------ANAC58          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------ANAC58xxxxxxxxxxx        <---------ANAC58<----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    >>>>>>>ZML2--------->ANAC46 ----REM1(1)           <---------ANAC58 --------->ANAC58       <---------YAB1--------->ARR14(2)  ---- --->ALFIN1       <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxx>smallRNA(se3)------->TEIL     --------->ZAT6 <-----------GT1 <---------ARR14(2) <---- xxxxx>smallRNA(i2)    <---------ANAC58 --------->ANAC58  <----------DOF2<---------LBD16<xxxxxxxxxxxx   tagccgaagtccgtatgaggctttggctttgcatcttctaacaaggaaacactacttatgcttttacgattcagttgcggttctagttcttatactcaat  14546700     ----------->HVH21   --------->ANAC46 -->WOX13(1) xxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxsmallRNA(se3) xxxxxxxxxxsmallRNA(si3) xxxxxxxxxxsmallRNA(le3)                                         <----------DOF2 xxxxxxxxxxxxxxxsmallRNA(i2)                                ---------->DOF2 xxxxxxx>smallRNA(i2)                                 <---------ANAC58                <---------ANAC58 xxxxxxxxxxx>smallRNA(se3)                 <---------HSFC1(2) xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxsmallRNA(s2)                         --------->HSFC1(2)xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxsmallRNA(se3)             ------>MYB46(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxx>smallRNA(se3)             ------>MYB83<---------ANAC58                <---------ANAC58 xxxxxxxxxxx>smallRNA(fl3)             --------->MYB46(3) <---------HSFB2a(2)--------->At4g35610 ----->YAB1       --------->ICU4      -------->P  <---------ANAC58       <---------REM1(1) -----ATHB12    --------->YAB1   --------->ZAT6   <---------ANAC58       --------->ALFIN1      ------ xxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->HSFB2a(2)<---------At4g35610   catacacatgacatctagtcatatttgactcgaaaacactaaccaagcttcttcgtgcttctcaaagctttgatggtgtagcagaagtccgtatgagtca  14546800                                                                          --------->YAB1                                                                         <---------ATHB12                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                   <---------ANAC58 --------->ANAC46       ------->TEIL                            <-------GAMYB   <---------YAB1     ----------->HVH21  <----------DOF2                         <---------ARR14(2)   <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)------ <---------ANAC58 --------->ANAC58      <---------YAB1      <---------ARR11(3)  --------->ANAC46 <---------ANAC58 ----------->GT1     <-----------GT1 <----------DOF2  --------->WOX13(1)    -------- --->ATHB12       --------->ANAC58 <----------DOF2 <---------ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   ttggctttgcatcttctaacaagaaaaaactattaggcttttacgattcggttgcgcttctagttcttatactcaatcatacacatgacatttagtcata  14546900                                                                                   <---------CCA1(2)                    <---------HSFC1(2)                                         <----------DOF2                    --------->HSFC1(2)                                        <---------ANAC58                   ------>MYB83                                  <xxxxxxxxxxxxxxxxsmallRNA(fl3)                   ------>MYB46(1)                              <xxxxxxxxxxxxxxxxsmallRNA(i)                 xxxxxxxxxxxxxxxx>smallRNA(i)                   <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                --------->MYB46(3)                              <xxxxxxxxxxxxxxxxsmallRNA(s)               -------->P                                       xxxxxxxxxxxxxxxx>smallRNA(s)          --------->ZAT6                                       xxxxxxxxxxxxxxxx>smallRNA(i)         <xxxxxxxxxxxxxxxxsmallRNA(i)                          <xxxxxxxxxxxxxxxxsmallRNA(s)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <-------TEIL    <---------ANAC58   <xxxxxxxxxxxxxxxxxxsmallRNA(le3)       <----------DOF2    <xxxxxxxxxxxxxxxxsmallRNA(s) --->ICU4<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------REM1(1)      <----------DOF2 ->YAB1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       <---------ANAC46 <xxxxxxxxxxxxxxxxsmallRNA(s) -----   tttgactccaaaacactaaccaagcttcttcttggttctcaacgctttgatggtgtagttgaagtccatatgagtctttggctttctatcttctaagaag  14547000                                --------->GLK1(2)                             <---------ANAC58       --------->YAB1                          <--------P               <---------ATHB12                         <---------MYB52(1)      --------->WOX13(1)                         <-------GAMYB         ------------>CBF                     <------ZmHOX2a(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                     --------->ARR14(1)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     --------->CCA1(2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    <---------ARR11(3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                    --------->ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    <---------ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    --------->ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    --------->ARR11(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    --------->AGP1       <---------YAB1     ----------->HVH21                  xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  <xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   ---      <---------ANAC58  --------->LBD16  <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)--------->ICU4        ------      <---------ANAC46------>ZmHOX2a(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            --------->ARR11(3)      <---------ANAC58<---------LBD16 <---------ARR11(3)  --------->ANAC46              <---------ARR11(3) <---------ICU4   <xxxxxxxxxxxxxxxxsmallRNA(s)--------->ANAC46         --------->YAB1   --------->GLK1(2) ------>GT1  <----------DOF2 <---------ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  ----------->TBP<--   gaaacattacttgggcttttaagatccggttgcgattctagttcttatactcaatcatacacatgacatctagtcatatttgactacaaaaatctaacaa  14547100                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                             xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         --------->ANAC58       <----                                                                         --------->ANAC58  <---------                                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <------------CBF                <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        >>>>>>>>>ARR2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)                       --------->ATHB12   <xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <---------YAB1     <---------ANAC58    <---------CCA1(2) --------->ZAT6 -------                    <----------DOF2      <---------ANAC58<----------DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    --------------------->WRI1          <---------ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)         <---------ANAC58                <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------ANAC58               xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------>HSFC1(2)<---------CCA1(2)      xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---->DOF2   <---------YAB1         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -------HSFC1(2)xxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   agcttcttcttgcttctcatagctttgattgtgtagccgaagtccgtatgagtctttggctttctatcttctaacaaggaaacactacttaggctttcat  14547200                                          <-----------HVH21                                         <---------ANAC46       <---------ANAC58                  --------->O2       <---------ANAC46                  <---------bZIP60(1)    <--------P                           --------->bZIP60(1)   <-------GAMYB                         <---------TGA2(1)   <---------MYB52(1)                    <---------O2  xxxxxxxxxxxxxxxx>smallRNA(i)          --------->RAP2.6(3)                 --------->HSFC1(2)  --------->LBD16                      <---------TGA2(2)                    <---------HSFC1(2) ---------LBD16                       ----------->HVH21                    --------->ANAC58 ----->ZmHOX2a(2)       --------->ANAC55(2)        --------->ICU4          --------->ANAC58 ------->ARR14(1)     <---------YAB1  ----------->TGA1              <---------ANAC55(2) ------>ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          --------->ANAC46              <-- -------ARR14(2)  <---------ANAC46  --------->ANAC46                --------->ANAC58          xxxxxxx -----YAB1<---------ARR14(2)  --------->YAB1  --------->ANAC58      --------->ANAC55(1)      -------- -DOF2 <---------ANAC58 --------->TOE2(3)--------->TGA2(1)          --------->ANAC58      --------->TOE2(3) -->YAB1  --------->ARR14(2) <---------ATHB12 --------->ANAC58      --------->ANAC55(2)<---------GLK1(2)   gatccggttgcggttctatgtcttatacttaatcatacacatgacgtcaagtcatatttgactccaaaacacgaaacaagcttcttcttgattcttaaag  14547300                                        ------->TEIL                                        <---------ARR14(2)                    ------>ZmHOX2a(2)                                        --------->ARR14(2)                   <------ZmHOX2a(2)      --------->ALFIN1           <---------TOE1(3)                          <---------AGP1      <---------REM1(1)          <---------TOE2(3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------DOF2                   <---------DOF5.7(2)--------->ANAC58         --------->ARR11(3) xxxxxxxxxxxxxxx>smallRNA(i2) --------->DOF5.7(2)  --------->ANAC58  <----------DOF2 -->DOF2            ------>ZmHOX2a(1)  <---------CCA1(2) --------->ZAT6     <---------ARR11(3)      <   ctttgatggtgtagccgaagtcctattaagacgttaacgttgtatcttctaacaagaaaacactaattaggcttttaagatctcatttcgattctagttt  14547400                                                    ------>MYB46(1)                                                    --------->ANAC46              <---------At4g35610                   --------->ANAC58              --------->At4g35610                   ------>MYB83        --------->YAB1      --------->ICU4          --------->ANAC58       <---------ATHB12--------->ANAC58         ------->TEIL                                       <-     --------->WOX13(1)--------->ANAC58    <---------ICU4                                      <-----  --------->ANAC46     --------->ANAC46    --------->YAB1                  <----------DOF2     <----- -----------GT1 ----------->HVH21         <---------ATHB12            ---------->DOF2    ---------->DOF2   ttatactcaatcatacagatgacacaagtcatatttgactccaaatcatgaaccaagcctcttcttgttgttcaaagctttgattttgtagcaaagtccg  14547500  Previous    Next  AGI:  At1g38790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G08986.1) Range:  from: 14545718    to: 14546969    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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