Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->MYB52(1)                               --------->TOE1(3)                               --------->TOE2(3)                               <---------------AGL15                               --------------->AGL15     --------->GLK1(1)  --------->ANAC58       ------>MYB83 ---------At4g35610     --------->ANAC58       ------>MYB46(1) -------->At4g35610   --------->CCA1(2) <------ZmHOX2a(1)                                   --------- ------>DAG2     ---------->DOF2  ---------->DOF2          <---------ANAC58                 --------- ------>DOF2 <---------ANAC55(2)<---------------AGL15      <---------ANAC58            <----------ARF1   aaagctgatttcaatacataaaagataagcaaaccttaaagaggaaaccaaacagatagatgcttactgagaaacaacatcgtgagtggaagacaagtat  14179300                     ------>MYB83                     --------->MYB52(1)                   <---------MYB59                   --------->MYB46(3)                   --------->AtMYB61                 ------>MYB46(1)                --------->ORA47(1)                                                                ---               --------->DEAR3(1)                                                               <----              --------->DEAR3(2)                                                         <---------GLK1(2)     ------>MYB83------>MYB83                                                     ----------->HVH21     ------>MYB46(1) ------>MYB46(1)                  ------->GAMYB      --------->YAB1  <---------ARR11(3) >ANAC58      --------->MYB46(3)                   --------->MYB52(1)    <---------ICU4----------->ARR10 >ANAC58    <---------ARR14(2)             <-------TEIL   --------->ATHB12  <---------ICU4--------->GLK1(2)   ggagaccaaatgagaaaccgaccaaaccgatgagtcgaaatcgagttcatgaacaacgaaagattgaaggaagaatcatcatctctgacaagattcttga  14179400                                                                                                 <---                                                                   <-----------RAV1(1)          <----     ----------->GT1                                              ------->MYC3               <------- --->ZmHOX2a(2)                   <---------HSFB2a(2)<---------YAB1--------->ALFIN1          -------- -----ARR11(3)                   <---------LBD16 --------->TOE2(3)<-------MYC3              <------ZmHOX2a(1)   tctcagattgtaaaaagattgaaactttggaattatctgggagtttaagaacgttattgttcttcaaacgtgttgctgtatcagtttctacagaggattt  14179500                                                                                       <---------AHL20(2)                                                                                      <---------AHL20(2)                                                                                      <---------AHL20(1)                                                                                      --------->AHL20(2)                  --------->ANAC58                                                    --------->YAB1                  --------->ANAC58                                              --------->ANAC46                  --------->ANAC46                                              --------->ANAC58              --------->CCA1(2)                                                 --------->ANAC58           ------>MYB83                                                   --------->AHL20(2)           --------->ANAC58                                  --------->DAG2    --------->WOX13(1) ------At5g28300--------->REM1(1)                       --------->ANAC58  <---------AHL20(2) -------GT1------>MYB46(1)                              --------->ANAC58 <---------AHL20(2) --ARR14(2)--------->ANAC46                 --------->YAB1  ---------->DOF2  <---------ATHB12      <- ->ARR14(2)--------->ANAC58   <---------ARR11(3)        --------->ANAC46 --------->AHL20(2)      <---   accatataaaaccaagctacacgaagcatcaatatccatggctaaatcaaaacaaaacacgaaaaagtttcaaaatttaatcaagcaataaaattcccaa  14179600                                                                               ----------->HVH21                                                                              --------------->AGL15                                                                             ----------------->AGL1                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                         <---------ANAC58                                                                 --------->ARR14(2)                                                                 <---------ARR11(1)                                                                 <---------ARR14(2)                                                    <---------DAG2       <---------ANAC58         <--                                          ---------->DOF2        ------->TEIL<---------ANAC46    ----                                       --------->AHL20(2)       <---------CCA1(2)                ----                                       <---------AHL20(2)       <---------ARR14(1)             <-----           ----------->GT1         --------->AHL20(2)           <---------GLK1(2)---------->DOF2<---- ---------DOF2                   <---------GLK1(2)  <----------DOF2   ----------->HVH21       ------- ------ATHB12                  --------->ICU4      <---------DAG2--------->GLK1(2)         --------->MYB52(1)   tctttaacaagaagggtttattagaaatgggcaaagattatttaaaaagcttacctttttctcaccgaatctctgacttgcctgaaagtgaaacaacggc  14179700      ---------->DOF2 ----------->GT1 ----NtERF2 ------->RAV1(1)                                                            --------->YAB1 -->NtERF2            --------->ANAC46                                     <---------ATHB12       === ----------------WRI1 --------->ANAC58      ----------->GT1              --------->WOX13(1)       --- ------ID1            --------->ANAC58     *TSS                     <---------ATHB12     <------ZmHOX2a(1) >GAMYB          <---------WRKY18(1)--------->MYB52(1)       <---------AtLEC2        <---------MYB52(1)   gacaagtgaaaagagagcatgaccacgaaactgttcaataacgaattggtaaactaagtttttgtatgaaatcatctatcattttctgttaggaggtata  14179800                                                                  --------------->AGL15                                                                  <---------------AGL15                                  --------->ICU4                  --------->TOE1(3)                                  <---------ATHB12                --------->TOE2(3)                           --------->TGA1a                     <-----------GT1                           <---------O2                    <------------------------ANAC81                           --------->O2                   <---------AHL20(2)                           ==================================================bZIP_DOF                        <-------TEIL                     --------->AHL20(2)     ----------->GT1   --------->CCA1(2)                 <---------AHL20(2)   ---------->DOF2    <---------ARR14(2)                 <---------AHL20(1)   ==================================bZIP_DOF       <---------ZAT18       <---------GLK1(2) =================================================================================MADS_MADS   <<<<<<<ZML2 ------------>AGL15   --------->ARR14(2)        --------->ALFIN1  <----------DOF2    --------->YAB1   caagataaagaaaaaactgaagtagattcacgtctaatgactaatgagacttggtgcaattttttttactttaacaggttttcccaagaataactagaac  14179900                                     ------>MYB46(1)                                     ------>MYB83                                   ------->GAMYB                                   <---------MYB59                                   --------->AtMYB61                                  --------->MYB46(3)                                              ---                                 --------->ANAC58                                      --------->DAG2                                 --------->ANAC58                                --------->AHL20(2)                             --------->YAB1                               --------->CCA1(2)       <--                          <---------ICU4                               <---------TOE2(3)   ----------     --------->LBD16      --------->YAB1       <-----------GT1    --------->At4g35610 ---------->DOF2   taagtccctgaaaattccaattcacaaataatcacaaccaaacacatatatacagtcccaattcagagagcttaagatttgaatcaaataaagcaaagga  14180000                                                                                         --------->YAB1                                                                                        <---------YAB1                                                                                 <---------YAB1  ----                                              <---------AHL20(2)            <----------DOF2      ---- ------>HSFC1(2)                           <---------ARR11(3)         --------->YAB1  --------->YAB1 -------HSFC1(2)                           <---------AHL20(1)--------------->AtSPL8  --------->ICU4 >DOF2<---------ARR11(3)                   --------->AHL20(1)<---------------AtSPL8 xxxxxxxxxxxxxxxxx   agtttcaagctctattttcagcaattgatcaagctctgttttcaatatataaaaaataccaattgagtactaacatagctttgatgaatgatgatagtac  14180100             --------->ATHB12    ------>ZmHOX2a(2)           <------ZmHOX2a(2)   --------->ARR11(3)                                                 ---    ---------->DOF2            <---------ARR11(3)                                              ------ ----->TOE1(3)        ---------->DOF2                                                  --------->GLK1(2) ----->TOE2(3)       --------->TOE1(2)                               ----------->RAV1(1)       ------ xxxxxx>smallRNA(i2)--------->MYB46(3)                         <------NtERF2 ------->TEIL--------->YAB1   cttagacaaagcgatcgattgaaccaaagagttgatcttggctattgtggaagaacaagagaggcagagagcaacaatgaaccctagagaatcaaaacaa  14180200  Previous    Next  AGI:  At1g37150.1    Description:  HCS2 (HOLOCARBOXYLASE SYNTHETASE 2); catalytic. similar to HCS1 (HOLOCARBOXYLASE SYNTHASE), catalytic [Arabidopsis thaliana] (TAIR:AT2G25710.2); similar to HCS1 (HOLOCARBOXYLASE SYNTHASE), catalytic [Arabidopsis thaliana] (TAIR:AT2G25710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61807.1); contains InterPro domain Biotin/lipoate A/B protein ligase; (InterPro:IPR004143); contains InterPro domain Biotin--acetyl-CoA-carboxylase ligase; (InterPro:IPR004408) Range:  from: 14177422    to: 14179743    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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