Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------MYB52(2)                                                                               <---------MYB52(1)                                                                             <---------MYB46(3)            <----------DOF2                                  --------->ZAT6  --------->MYB46(2)            --------------->AGL15                           >>>>>>>>>>AtWER  --------->MYB111(1)            <---------------AGL15                          --------->MYB52(1)--------->MYB52(2) -------->TOE2(3)                                 --------->YAB1    --------->ZAT14   <------NtERF2<- ---ATERF1(1)                                    <---------YAB1   <---------YAB1 --------->MYB52(2)-- ->DEAR3(1)<-----------------AGL3        <-----------GT1  ------->GAMYB  <---------MYB46(3) <-------- >RAP2.3(1)----------------->AGL3  --------->REM1(1)     <---------MYB52(2)<---------MYB52(1) -------   tacataaatagtcgctatatttagtgactatttggctacaattttacgactattatacaactaacagtactatagtcgttagttagtcgccaaataacca  14073400                                                                  --------->ICU4                                                               ----------------->AGL3                                                              ------>NtERF2                                                        <-------GAMYB                                                        <---------ANAC58                                                        <---------ANAC58                                                       <---------MYB46(3)                                                xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                               <-----------------AGL2                                               <-----------------AGL1           --------->ANAC58                    <-----------------AG           --------->ANAC58              <---------AHL20(2)  <---------ETT(2)         <---------ATERF1(1)            --------->YAB1<---------TOE2(3)        ----------->HVH21               --------->AHL20(2)<---------MYB46(3)    --------->ANAC46           ----------->GT1 ==================================MADS_MADS      <xxxx --------ZAT14    <---------YAB1       <---------YAB1 <---------YAB1                   <------NtERF2 ------->ZAT14<---------DAG2xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------NtERF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---GT1xxxxxxxxxxxxxxxx>smallRNA(s) <---------YAB1<---------GLK1(2)       ----------->GT1 <---------MYB52(1) -->MYB46(3)------>NtERF2  ---------->DOF2  ----------->HVH21--------->ETT(2)        <---------DEAR3(1)   ctatacaggcgagacgccttattagtcgctaaagggtgactattatatgaccgattttggttgtcgccaaaattagtcgtaaattagtcgccgtttagcg  14073500               --------->At5g28300               --------->LBD16              --------->RRTF1(2)              --------->RAP2.3(2)              --------->RAP2.6(2)              --------->RRTF1(3)             <------NtERF2             --------->RAP2.3(1)            ------>NtERF2            --------->LBD16           --------->DEAR3(1)                                                                       x           --------->ANAC46                                                                    ------           --------->ANAC58                              <--------P                        -------->HAHB4           --------->ANAC58                          <---------ANAC58                     <---------YAB1          <---------MYB55(2)                         <---------ANAC58                     --------->ICU4          --------->DEAR3(2)              <---------ANAC58       <---------AHL20(2)  --------->ANAC58          --------->MYB46(3)              <---------ANAC58      --------->AHL20(2)   --------->ANAC58      --------->ANAC46                    <---------AtLEC2  <---------YAB1           --------->ANAC46    <-----------GT1            ------->GAMYB        <---------LBD16                  --------->ANAC55(1) xxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ATHB51<---------ANAC46                --------->ANAC55(2)   actaatatacgacccgccgtaatagtcgttcaacagcaactattgcatgactatttcgggttgtcattaaatatagtcgcaaaatagacgtaattatcga  14073600         ------->MYC3         <-------MYC4                                                                             ---         ------->MYC2                                           <---------ANAC58                 <---         <-------MYC2                                           <---------ANAC58                 ----         <-------MYC3                                           <---------ANAC46              <------   --------->DAG2                <---------SPL7                ---------->ID1             <----------  ---------->DOF2               <---------REM1(1)   --------->ZAT18                     <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <---------ZAT14                     <---------ANAC58 --->ATHB12  ------->TEIL    <---------MYB46(3)     --------->ZAT14                     <---------ANAC58   ttgaaaaagcacatgtattttgttttgtaagttgttgtaccggtttaaaacgactacactattttgtcgtgttttagtcactctaaaattgcctatataa  14073700                                                                                                   <-                                                                                                  ---                                                                                                  <--        <---------ANAC55(2)                                                                       ---        --------->ANAC55(2)                                                                       <--       <---------------AtSPL8                                                                     <--       --------------->AtSPL3                                                                     ---       --------------->AtSPL8                                                                    ---- ------>YAB1                ----------->RAV1(1)                                                ------ ------YAB1                --------->ANAC46               <---------TOE2(3)             ----------->GT1 ------->GT1        <-------TEIL     ------------>CBF <----------DOF2                  <----------ID1 ---AHL20(2)  --------->ANAC46      --------->YAB1   --------->TOE2(3)                 ----------->GT1 -----AGL15<-------TEIL  --------->YAB1         --------->YAB1                       --------->MYB52(1)   tgaaaatttcacgtacacaaaattcattcacaacacaaacacaatacaaataatacctttaagaaaaaaaacgtttttgatgaaaaaaaacgataaaaaa  14073800                                        --------->YAB1                                        <---------ICU4                                       --------->ICU4            --------->ATHB12           <---------YAB1            --------->ATHB51          --------->AHL20(1)           <---------YAB1             <---------AHL20(1)        --------->AHL20(2)     <------NtERF2                                         <---------ARR11(3)        <---------AHL20(2)     <<<<<<<<<<E2Fb                                        --------->ARR11(3)   <---------AHL20(2)          ----------->GT1                                --------->ZAT18 --------AHL20(2)             --------->LBD16                              <---------ANAC58 ------>AHL20(2)             <---------ANAC58                              <------MYB46(1) -------AHL20(2)             <---------ANAC58                              <---------ANAC58 ------>AHL20(1)             <---------ANAC46             <---------MYB46(3)  <---------ZAT14 -------AHL20(1)            <---------LBD16 <-----------GT1                <---------ANAC46 -------ARR11(3)        --------->YAB1<---------AHL20(2) <---------AtMYB61 <------MYB83 ------>ARR11(3)        <---------ICU4--------->AHL20(2) --------->ALFIN1 --------->MYB55(2)       -- ----->AHL20(2)        <---------YAB1--------->YAB1 --------->MYB52(1)    <---------MYB46(3)      --- --->AHL20(2)<------------CBF*TSS   --------->ICU4---------->DOF2        --------->ALFIN1         ---   tatatttagttttattattggtcttataatggcgggaaattataattatccgaatagcggtggttttaatcgagagtgggtgtacaagatgttcgatgaa  14073900                                          --------->ARR11(3)                                          <---------ARR11(3)  <---------LBD16              <------ZmHOX2a(1) <---------ANAC46           <-----------RAV1(2)                                         --------->At5g28300 <---------bZIP60(2)<---------ARR14(2)   <---------GLK1(1)                    xxxxxxxxxxxxxxxxxxxxxxx ------->MYB52(1)   --------->ARR14(2)   --------->GLK1(1)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------->TGA1 --------->At4g35610     <------ZmHOX2a(1)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------->HVH21<---------At4g35610--------->ALFIN1      xxxxxxxxxxxxxxxx>smallRNA(s)   ----------->GT1   atgacggggaatttgacagcagaatacgttgcaggagtggaggagttcttgacatttgctaatagccagcctatagtacaaagttgtcgaggtaaattcc  14074000                                                                                                   <-                                                                                                  ---                                                                                        <---------YAB1            <---------ANAC46                                                            --------->ICU4          <---------ANAC46                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <------        <---------ZAT14                        ---------->DOF2                     <---------ANAC58<-        <---------At4g35610            <---------ANAC46                            <---------ANAC58<-        --------->ZAT14       --------->ARR11(3)--------->DAG2                   <---------YAB1   --- <---------YAB1        --------->AHL20(2)  <--------P                    <---------TOE2(3) <---------YAB1 >smallRNA(se3)     --------->YAB1    <---------LBD16                 --------->WRKY18(1)<---------ICU4   actatccttgtgctgtgtgcaagaataaaaaacatattgtctcgggtagaaaagttagtagtcatttgtttagtcaaggatttatgcttgattattatgt  14074100                                                              <---------ARR11(1)                                                              --------->ARR14(2)                                                           --------->ANAC58                                                           <---------ANAC55(2)                                                           --------->ANAC55(2)                                                           <---------ANAC58                                                      <---------------AtSPL3                                                 --------->TOE2(3)                                                 --------->YAB1                                                ----------->GT1 --------ANAC46              ------->TEIL       <---------YAB1------->TEIL          --------->ALFIN1 ------>MYB46(2)          <---------YAB1      <---------ICU4  <---------ARR14(2)---------->DOF2   <-- ---YAB1         <---------ARR11(3)           --------->YAB1 <---------CCA1(2)<---------YAB1      --- -----MYB46(1)   --------->ARR11(3)          --------->ICU4<---------ANAC58 <---------ICU4      <---- -----MYB83     <---------HSFB2a(1)     ----------->GT1    --------->ANAC58--------->ICU4    <------- ------>MYB59   --------->HSFB2a(1)<------ZmHOX2a(1)  <---------------AtSPL8--------->YAB1  <--------   ttggtataagcatggggaagatttcaacatgaatgtaggaacgagtaattatgttaatagtacgtatctaagagagaattatgaaagtgtggataatgtt  14074200      ----------------->AGL3      <-----------------AGL3      ----------------->AGL2      <-------TEIL                                                                <---------ANAC46      <-----------------AGL2                                                      <---------ANAC58     <------ZmHOX2a(2)                                                         --------->ALFIN1    <---------ARR14(2)                                           ------->TEIL<---------ANAC58    --------->ARR14(2)                <------ZmHOX2a(2)        <-------TEIL  <---------ANAC46    <---------ARR11(3)         --------->HSFB2a(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->ARR11(3)         <---------HSFB2a(2)--------->CCA1(2)          <---------ANAC58 -------HSFB2a(2)            <---------REM1(1)   --------->ARR14(2)  ----------->GT1      --------->YAB1 ------>HSFB2a(2)         <-----------RAV1(1)    <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -----REM1(1)             --------->ICU4     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ANAC58 -- ----RAV1(1)       <---------ANAC46  --------->ARR11(3)  <---------DOF5.7(2) <---------bZIP60(2)  <-- -TOE2(3)          --------->ALFIN1  <---------ARR11(3) <---------WRKY38(1)  <---------O2<---------YAB1   gtagaagatccatatgtggatgtgggtaatgttgtagaagatcaatatgtggatatggtgaacgatgcatttcgttataacgtggggtttgatgataact  14074300  Previous    Next  AGI:  At1g37040.1    Description:  transposable element gene. CACTA-like transposase family (En/Spm), has a 2.3e-110 P-value blast match to GB:BAA20532 ORF of transposon Tdc1 (CACTA-element) (Daucus carota) Range:  from: 14073829    to: 14078694    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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