Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <-----------ARR10                                  --------->GLK1(2)         --------->YAB1                                  --------->ARR14(2)     <----------DOF2                                 <---------GLK1(2) ------->TEIL   <---------ICU4      <---------AHL20(2) ----->AtLEC2               <-----------TGA1       <-----------ARR10               --------->ICU4  <- -TEIL                      <-----------HVH21      <---------ARR11(1)         --------->ANAC46    <-- >LBD16                    <---------ANAC55(2)     --------->ARR14(2)     ------>MYB46(1)  <--------- ---->AtSPL8               <---------ANAC58        <---------ARR14(2)     ------>MYB83<---------YAB1 ---->AtSPL3               <---------ANAC58       <---------ARR14(1) <-----------GT1<---------ICU4---   tgctaaatttctcatcttcgaaatcgattccgtcagaatcgtcgcagtaatcgaatctactttcatcatcttcaccatccacataaatattattaacttc  14060900                                                                                                 ----                                                                                             ------->GAMYB                                                          <---------ANAC58                  ---------                                                    <---------AHL20(2)                      ---------                                                    --------->AHL20(2)                 --------->ANAC46                                                    <---------AHL20(1)                 --------->ANAC58                                                    --------->AHL20(1)                 --------->ANAC58                                          <---------DAG2  <---------ANAC58          --------->ZAT14                                          --------->TOE2(3)                         --------->ZAT18 --------GLK1(2)              --------->ARR11(3)    <---------ARR11(3)              <---------ZAT14 -------At4g35610             <---------ARR11(3)    --------->ARR11(3) <---------ARR11(3)   --------- --GT1        <-----------GT1<---------GLK1(1)--------->HSFB2a(2)  ---------->DOF2  <---------ZAT18 ------>At4g35610 ----------->GT1      <-----------GT1  <-----------GT1--------->ARR11(3) --------->MYB52(1)   agcttcttccatgttttcactggataaatcgatatctcattctaccttatggaatatattacttggtcgtaaagaacttgtcaaactgcactcaacgaaa  14061000                                                    ---------->DOF2                                                --------->At4g35610                                           <---------At4g35610                                           --------->ANAC46                                 ---------                   >>>>>>>>>GATA-2       <---------ALFIN1     ----------->GT1             --------->At4g35610 ----->MYB46(3)    >>>>>>>>>GATA-3       --------->REM1(1)    <---------MYB46(3)        --------->DAG2 >ANAC46           >>>>>>>>>GATA-1     <-----------HVH21     <---------AtMYB61         ---------->DOF2 >ANAC58           >>>>>>>>>GATA-4     ------>ZmHOX2a(1)   <---------ANAC46      ----------------->AGL3 >ANAC58    <----------DOF2  --------->AHL20(2) <---------At4g35610         <---------At4g35610   ccatcaattccttcctttgtggattgaactataaatttctccttcacctcagcacaaagtcgagtggtttcattcttcatatgcccaaaaaaagctgaaa  14061100                                        <--------P                                       <---------MYB52(1)                --------->YAB1     <---------At4g35610                <---------ICU4     --------->At4g35610               <---------ATHB51------->TEIL               <---------ATHB12<---------ARR14(2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         --------->GLK1(2)      <---------ICU4           --------->ARR14(2)          <---------ARR11(3)      <--------HAHB4          <---------CCA1(2)          <---------TOE2(3)              <---------ANAC58      --------->YAB1        <---------ANAC46  <----------DOF2                           <---------ANAC46     <---------YAB1   <-----------RAV1(1)<---------MYB46(3)--------->ARR11(3)           <---------ANAC58 -->GT1  <-----------GT1 <---------AtMYB61 <---------ARR11(3)                  <----------DOF2   attgtctattattaccaataataactggtggtgtatctgctggtagttcttttttttttgagattttgtaactcaaaactactttgaatagcttgttatc  14061200                                                        --------->ARR11(3)                                <---------ICU4          <---------ARR11(3)         --------->TOE2(3)                                --------->YAB1       --------->HSFB2a(2)      <---------YAB1                               --------->ICU4    --------->TOE1(3)         <---------YAB1                          --------->ANAC58   <---------MYB52(1)        --------->YAB1             <--                          --------->ANAC58  <-------GAMYB           <----------DOF2<-----------HVH21          ------>ZmHOX2a(1)    <---------ATHB12  --------->TOE2(3)  --------->TOE2(3)    --------->DAG2  --------->YAB1     <---------TOE1(2)     <---------MYB46(3)    --------->GLK1(2)--------->ANAC46<--   caaatcgtaatcctcatacatcgttggaacgaaatcatggtttggctgttaccttcaagaactcgacaatctttaatattatcaacgtcaaaaggctatt  14061300                           --------->ANAC58                           --------->ANAC46        -------->P                       <---------ALFIN1            ------>MYB46(1)                     ----------->RAV1(1)           ------>MYB83                ----------->RAV1(2)               ------>MYB46(1)                --------->At4g35610             --------->MYB46(3)                <---------At4g35610             <---------MYB59                =================RAV           --------->ANAC46            <------ZmHOX2a(2)      --------->GLK1(2)           <---------ARR14(2)    --------->KAN4(1)------>MYB83           --------->AGP1  --------->ANAC58    --------->ANAC58           <---------ARR11(3)    <---------KAN4(1)<---------ALFIN1           --------->ARR14(2)   <---------KAN4(2)*TSS   <---------MYB52(1)                    ------- ----MYB46(1)<-------TEIL--------->ANAC46 ------>ZmHOX2a(2)<---------YAB1            ---------->DOF2 ----MYB83 --------->ARR11(3)  --------->YAB1  --------->ANAC58               --------->AHL20(2)   tggtttttccaaagatccatctgccacacacgagaataatctgatccatacccaaccccttatttttagtatgaagaaaatgaattagaaagcgaataaa  14061400                                                                              --------->TGA1a                                                                              <---------TGA1a                                                                              --------->O2                                                                           --------->TOE1(2)                                                                           --------->TOE2(2)                                                                           --------->DEAR3(1)                                                                          --------->MYB46(3)      ---                                                                          --------->DEAR3(2)   ------                                                                      --------->MYB46(3) --------->GLK1(1)                                                             <------ZmHOX2a(2)<---------O2    -------                                                <---------ANAC46   <----------ID1        <---------GLK1(1)                                      ---------->DOF2       --------->ARR11(3)=======================             --------->DAG2           ==================================================bZIP_DOF ---- -->AHL20(2)---------->DOF2        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->MYB52(1)  <--------   aaaaaacatgaataaaaagtcgaaactcaaatagagaaacaaaagaagaagcgtagatgagagatcaagagaacaaaccgacgagtctaagaaatcccga  14061500                                                                                                   --                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                      <---------ATHB12        <------NtERF2                           -------->P                      xxxxxxxxxxxxxxxxxxxxx ------>DAG2                          --------->ZAT6                          <xxxxxxxxxxxxxxxxxxxxxx --->LBD16                           <---------ATHB12                  <---------ICU4------>MYB83---- -->LBD16                           ------>MYB83------>MYB83  --------->ZAT6 --------->ANAC46 ------- =======bZIP_DOF --------->YAB1     ------>MYB46(1)     <------NtERF2 <---------YAB1 ------>MYB46(1) ------>DOF2    <-------TEIL--------->ANAC46    ------>MYB46(1)     <---------ICU4  --------->WOX13(1) ---------AG<-------TEIL<-----------HVH21    --------->MYB46(3)     --------->YAB1 --------->AtMYB61   aaaggaaggccgagtacattcatcaccttcactcgacctatcactctaccaacatggccgagtaacaccatcatcattcactcgaccaatcactctacca  14061600    <------NtERF2                                                   <-------TEIL ----->GAMYB                                  --------->MYB46(3)<---------------AtSPL8 -->MYB83                                     <---------MYB111(1) <XXXXXXXXXXXXXXXXXXXXMIR417 -->MYB46(1)                      <---------ATHB12       --------->MYB52(1)                       <-- --->AtMYB61       <---------ICU4------>MYB83------>MYB46(1) <-----------HVH21                    --- >smallRNA(se3)   <---------YAB1 ------>MYB46(1)       --------->AtMYB61        <-----------HVH21<--- xsmallRNA(si3) --------->YAB1  --------->WOX13(1)     <---------ALFIN1        <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---->P <-----------GT1  --------->ANAC46    ------>MYB83<---------ALFIN1--------->YAB1          ---- -->MYB46(3)    <---------ICU4 --------->AtMYB61      --------->ANAC46  <-------TEIL     <------ZmHOX2a(2)   acaggccgagtaactccatcatcattcactcgaccaatcactcgaccaactactctaccacacggtcgagtacattcatcaccttcactcgatcactcta  14061700                                                                                      <xxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                  --------->ANAC46                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                               -------->P                                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                           --------->ANAC58                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                           --------->ANAC46      ----                                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                         <---------ALFIN1        ----                                                                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                        --------->ZAT18          ----                                                                        --------->ZAT14         <xxxx                                                                        <---------ZAT18  <xxxxxxxxxxx                                                                        --------->LBD16 <xxxxxxxxxxxx                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxx                                                         <---------GLK1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                  --------->ZAT2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <---------ZAT2                                <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxsmallRNA(i)    --------->ZAT2                                --------->At4g35610  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) --------->DEAR3(1)                               <---------At4g35610 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------ALFIN1                                    <---------ZAT2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------>AtMYB61          --------->ZAT6          ------>NtERF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------MYB55(2)        <-----------HVH21       xxxxxxxxxxxxxxxx>smallRNA(s)--------->ANAC58   <xxxxxx ----->MYB46(3) <---------ICU4          xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ccaccgagccgagtaccatcatctctatcactcgactaaatactcgactgccagcttcagagtcttcttcattccgcactcaaccagacactcgagcaca  14061800  Previous    Next  AGI:  At1g37035.1    Description:  transposable element gene. Mutator-like transposase family, has a 5.6e-50 P-value blast match to Q9S9L1 /206-367 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 14058922    to: 14061349    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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