Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <-----------GT1                                                         <---------YAB1               --------->AHL20(2)                                                    <---------ICU4        <---------HSFB2a(2)                          <---------AHL20(2)        --------->YAB1        --------->HSFB2a(2)                          --------->AHL20(2) --------->At4g35610          --------->HSFC1(1)                     <---------AHL20(2)      <---------At4g35610   <---------GLK1(2)  <---------AHL20(2) <---------GLK1(2)   --------->AHL20(2)   <-------TEIL<---------YAB1     <---------LBD16        -----   acagtttcttctcttggtgggattttatttaaatcaaacaaaaattcatctccatcatcactataaacagtttcttctggaatttcatttaaatcaaaaa  14016800                                   --------->YAB1                  <---------ICU4                             <---------------AGL15                --------->ICU4 <-------TEIL                --------------->AGL15   ----------->GT1   <---------AHL20(2) ---->AHL20(2)       ----------->HVH21 --------->GLK1(2)          <---------ATHB12                <--   aaattcattctcttcacttagaagtgacatactcaaataagaatttggaattgtgaagaaaattagaaatcattttttttaaaaactcacataaacatgt  14016900                                                                                            <--------                                                                                            ---------                                                                                           <---------AHL20(1)                                                                              --------->ANAC58    <--                                                                              --------->ANAC46    ---                                                                       <---------MYB46(3)  <---------AHL20(2)                                                                      <---------YAB1       --------->AHL20(1)                                                                      <---------TOE2(3)    --------->AHL20(2)       ---------->DOF2                                                <---------AtMYB61--------->AHL20(2)     --------->ANAC58            --------->ICU4                       <---------TOE1(3)<---------AHL20(2)     --------->ANAC58       ----------->GT1                        <---------MYB52(1) --------->AHL20(2) -------YAB1            <------NtERF2      <------------CBF<-----------GT1    --------->ANAC58 ------   atgattcaagaaagttttagtttggctccgatgtaaaaattttgaaattgtttgtttaaaattacttctgttatggttgcacacaaaaaaaaatttaatt  14017000                                                               <------------CBF                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                           <----------DOF2                                                      <-----------GT1                     <---------ANAC58                                                   <---------ICU4                     <----------DOF2                                                   -------->HAHB4                  <---------AHL20(2)                                                   --------->YAB1                  <-----------GT1                                                   <--------HAHB4              <---------AHL20(2)                                   <---------MYB46(3)<---------YAB1            --------->AHL20(2)    --------->DAG2                <--------P       -------->ATHB1            <----------DOF2   ---------->DOF2               <-------GAMYB     --------->ATHB51         <---------ANAC58   <----- -AHL20(2)               --------->AHL20(2)       <---------ATHB51          <---------ANAC58  <------ >AHL20(2)             --------->ANAC55(2)        --------->ICU4         <---------WOX13(1)  -------- -------ANAC55(2)      --------->ANAC58           <---------YAB1        <------------CBF  <---------ANAC58 -------->GT1          --------->ANAC46        --------->AHL20(2)     <---------AHL20(2)  --------->ANAC55(2) --->ICU4              --------->ANAC58        <---------AHL20(2)     <---------YAB1  <---------DAG2   atgtaaaaagttgctccattttttcaagtaatttgggttgtttgagagtttaattattactctttaattgttttaattgctttaattactttacttgatt  14017100                                                                                          <----------                                                                                        <---------ARR11(3)      <---------AHL20(2)                                                                --------->ARR11(3)     <---------AHL20(2)                                                           <-----------GT1     --------->AHL20(2)               --------->TOE2(3)                        ----------->TBP <---------YAB1           <---------At5g28300                                <---------AHL20(2) ----WOX13(1)     ----------->GT1  --------->ANAC58                          --------->AHL20(2)<----- ------CBF--------->YAB1 <-----------GT1                                    <---------AHL20(2) <----- ->ATHB12<---------AHL20(2)        --------->ANAC58  <------------CBF ----------->GT1  <---------CCA1(2)   gtttttattaaataatagttttgttaattactgtgctaagcctcaaaacatcccatattgaaacggagggagtagtaatttatatatccatatattgact  14017200                                                                                --------->GLK1(1)                                                        --------->DAG2         <---------GLK1(2)             <------ZmHOX2a(1)               ---------->ID1                    <-----------ARR10       <---------------AGL15                <-------GAMYB        <---------RVE1(1)       <----------DOF2                     <-----------RAV1(1)   <---------CCA1(1)         <---------YAB1  --------->At4g35610                      <---------MYB46(3)   <---------ARR11(3)       <----------DOF2  <---------At4g35610     ------->TEIL     --------->MYB52(2)   --------->ARR11(3)       <---------DAG2 --CBF --------------->AGL15               --------->MYB55(2) ----------->ARR10--------->ARR14(2) ----ANAC58<---------TOE2(3)             <---------MYB52(1)--------->ALFIN1    <---------ARR14(2) ----ANAC58<---------TOE1(3)   <---------AHL20(2)     ---------->DOF2        --------->LBD16       --   tggcaactgctttaaggagaactctatggatgtttaatgactcgtttgttgccttacaaaggtggagattttttgggaccggattttctcacttttattg  14017300                                                              --------->ZAT2                                                              --------->At4g35610                                                              <---------ZAT2               --------->LBD16<---------DAG2             <-------TEIL   --------->ALFIN1              <---------TOE1(1)               --------->MYB52(1)       --------->ALFIN1             <              <---------TOE2(1) <---------CCA1(2)     --------->At4g35610                        ----    <---------ANAC58          --------->TOE2(3)       <---------At4g35610   ------>NtERF2        <---    <---------ANAC58          --------->TOE1(3)<---------At5g28300   <---------HSFB2a(1)        ----- ---->ZmHOX2a(2)<---------TOE1(2)   <----------DOF2 <---------ZAT18  --------->HSFB2a(1)        <----   atctatgcgtccaagtccgaggtatacctctaccttatctttctgaattaactgtgagcttcatagctggaacgttggggcctattcttgagatggaatt  14017400     <---------ARR14(2)     <---------GLK1(2)     --------->ARR11(3)     --------->ARR14(2)         --------->LBD16     <---------ARR11(3)        <---------ANAC58 --------->YAB1                <---------ANAC58 ---------ATHB12               <---------ANAC55(1) ----->AHL20(2)                --------->ANAC55(2)    --------->YAB1 ------AHL20(2)          <----------DOF2 <------ZmHOX2a(2)                       <---------HSFB2a(1) ---->AHL20(2)         <---------ANAC46 <---------ARR11(3)                 <---------LBD16 -----AHL20(2)    <-----------RAV1(1)   --------->ARR11(3)            <---------MYB52(1)     ------->TEIL   taatcaagatacttcaacttatgttgcctttatccgtgttaagatcagacttgtattcatagaccgtcttcggttttttcggagagttcgttttgaatct  14017500                                           --------->GLK1(1)                                           --------->CCA1(2)                                          <---------ARR14(2)                                          --------->ARR14(2)                                         <------ZmHOX2a(1)                                   --------          <---------TOE2(3)            <---------TOE2(3)                                 <----------DOF2          <---------YAB1               <---------TOE1(3)                                 ------>ZmHOX2a(1)   --------->HSFC1(2)             <----------DOF2                                   ------->GAMYB   --------->HSFB2a(1)          <---------HSFC1(2)                          >>>>>>>>>>WRKY63 <-------   <---------HSFC1(2)           --------->HSFC1(2)                   --------->YAB1<------------AtMYB77   <---------HSFB2a(1)         --------->GLK1(2)                 --------->ZAT6 --------->MYB46(3)  -   agagaaggttctaagattgagtttgaatatgagaagctttgaaggatatgtactaagtgttgtcttatcactcatcaagtcaacaactgtcctttttaaa  14017600                                                             <---------At4g35610                                                          <---------At4g35610                                                       --------->At4g35610                                                       <---------At4g35610               <---------YAB1                          <---------ZAT2               --------->ICU4                          <---------HSFB2a(1)             <---------ICU4                            --------->HSFC1(2)          --------->YAB1                               <---------HSFC1(2)         <-------TEIL                   ----------------->AGL1 ----------->RAV1(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------At4g35610     <------NtERF2 ------->TEIL <------ZmHOX2a(1)      --------->ZAT6 ->AHL20(2)  --------->YAB1         <---------REM1(1)  --------->HSFB2a(1)<---------YAB1          --- --AHL20(2) <---------YAB1         --------------->AtSPL8 --------->At4g35610             <---------At4g35610 ------>TEIL--------->ICU4    <-------TEIL       <------ZmHOX2a(1)   --------->ZAT6       --------->At4g35610   tgcacctgtgattcatgatgatgaggcagaggtacttgatgtacctgtttaggaggaagctgctgcttctaatactatcactgatcaaactcatatgact  14017700  Previous    Next  AGI:  At1g36960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25600.1) Range:  from: 14017237    to: 14017949    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version