Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->HSFB2a(2)  ----------->GT1                      <---------HSFB2a(2)                        <---------ANAC58  < --------->DOF2         <---------AHL20(2)                                     <---------ARR14(2)   < ----->YAB1        ========================HOX2a_HOX2a                      <---------TOE2(3)     --- ----WOX13(1)      ------>ZmHOX2a(2)  <-----------------AGL1        --------->HSFB2a(2)   <---------MYB52(1) ->ATHB12  <---------DAG2           ------>ZmHOX2a(1)               <---------HSFB2a(2)  <-------GAMYB -YAB1  <-----------GT1 --------->AHL20(2)                      <---------GLK1(1) <---------ANAC58<--   gataaagataaaaccttttgatccattttattcttctccttctcgattttgcaaaacatcgtttcgatttctgtaactgaggtttcgtctccgttgagaa  13704400                                                                                           <-------TEIL                                                                                         <---------GLK1(2)              <---------MYB59       <---------ANAC58                                     --------->ARR14(2)             <-----------------AG   <---------ANAC58                                     --------->ARR11(1) ---------ANAC58     <---------TOE1(3)           --------->ARR14(2) <---------YAB1       <---------ARR14(2) ---------ANAC58     <---------TOE2(3) <---------At4g35610       <---------YAB1     <-----------GT1 ------>ARR11(3)------>MYB46(1) <---------At4g35610        <---------ZAT14         <---------YAB1 -------ARR11(3)------>MYB83<-----------GT1 <----------DOF2--------->ZAT14       --------->YAB1   gagcttgtttatatgacctaattagggtttttacatctgcttgctgctttgaattcgcttcttcactgttattagtctacaaattataacagattcgaat  13704500                                                                             --------->HSFC1(2)                                                                             <---------HSFB2a(1)                                                                             --------->HSFB2a(1)                                                                             <---------HSFC1(2)                                                            <---------At4g35610                                                    <---------ANAC58 --------->ARR14(2)                ---------->DOF2               --------->ARR11(3)     <---------ARR14(2)             --------->ANAC58              >>>>>>>>>TBF1    <---------ZAT2  <---------KAN4(2)             --------->ANAC58    --------->At4g35610<---------ANAC58--------->ATHB12           ---------->DOF2--------->AHL20(2)  <---------ARR11(3)   ----------->ARR10              ---       <----------DOF2  ----------->GT1 >>>>>>>>>TBF1       --------->At4g35610                  ----   tagaagaagctttaaaagcaaagaacatgtaaatatgctgaagaagaagaacttacttggtgagcagagaagattgggaattttcgactgggttttgaaa  13704600                  <---------ARR11(3)                                                                -                  <---------ARR14(2)             <---------TOE1(3)                                 --                  --------->ARR11(3)           ---------->DOF2                                     --       --------->CCA1(2)                    <---------ANAC55(2)                                    <-      <---------ARR11(3)                    <---------ANAC46                                       --      --------->ARR11(3)                    <---------ANAC58                                       <-      <---------ARR14(2)              <--------P <---------TOE2(3)                        --------->ANAC58    ----------->ARR10     --------->AtLEC2  <---------ANAC58                              --------->ANAC58 --------->ALFIN1 --------->ARR14(2) <-------GAMYB                                    =============== ------>ATHB12  ----------->ARR10   <---------MYB46(3)<---------TOE2(3)               <------ZmHOX2a(1) ----->ICU4  <---------REM1(1)     <---------TOE2(3)  <---------TOE1(3)         <------ZmHOX2a(1)----   tgagtggagatattggtgaaggtctgccatggaaatggaggttgtttcgtaaaggtaaggtttttgatgaagaagatggagaggagaaggagaagcaagg  13704700            --------->ATHB12           ------>ZmHOX2a(2)        <------ZmHOX2a(1)       <---------HSFC1(2)       --------->HSFB2a(1)       <---------HSFB2a(1)                                                                  ---------       --------->HSFC1(2)                                                                   --------- -------->CCA1(2)                          <------MYB83                                     --------- ------->ARR11(1)                          <------MYB46(1)                             --------->ZAT18 ------->ARR14(2)                         --------->MYB59                              <---------ZAT18 --------ARR11(3)                         --------->MYB111(1)                          <---------ZAT14 ------->ARR11(3)                      --------->ARR14(2)                            --------->ANAC46 --------ARR14(2)           >>>>>>>>>>>>>>>>>LFY                       ----------->GT1 --------->ZAT14 =================HOX2a_HOX2a    <-----------RAV1(1)   --------->TOE2(3)      <---------GLK1(2)   --- ------->ARR10     ---------->DOF2     <---------ARR14(2)           ---------->DOF2 *TSS  <----------   agatatggaaggatcgattgcgaaagaaatcgccattgttggatttggtagtagtaatctcagtgagtcccaaaggaaaaaattctcagggcacaggcaa  13704800                                                                       --------->AHL20(2)                                                                <---------AHL20(2)                                                               <---------AHL20(1)                                                               --------->AHL20(1)                                                           <---------AHL20(1)                                                      --------->AHL20(2)   --------->YAB1    --------->TOE2(3)                              <----------DOF2     <---------AHL20(2) >ANAC46                <------ZmHOX2a(1)    ----------->GT1  <---------AHL20(2) >ANAC58        <---------At4g35610          --------->YAB1--------->AHL20(1)                     <-- >ANAC58 <---------ARR14(2)                 <---------ATHB12--------->AHL20(2)            --------->YAB1 ------>YAB1    --------->At4g35610     ------------>CBF  --------->AHL20(2)             <---------YAB1 -RAV1(2)--------->ARR14(2)      <------ZmHOX2a(1)<---------ANAC46<---------AHL20(2) ------->TEIL ---   gagtaatctcaaatactcatctgtaaggacagtaaggacatttccaatggtgacttttaaatatatatattttttaattagaacatgtatattgatagtt  13704900                                                 --------->AHL20(2)                              >>>>>>>>>>GT-3b   --------->AHL20(2)                         ---------->DOF2     <---------AHL20(2)                        ------>ZmHOX2a(1)   <---------AHL20(2)            <---------HSFB2a(2)             --------->AHL20(2)                             <---------RVE1(1)            --------->HSFB2a(2)  ------------------------>ANAC81                         <------ZmHOX2a(1) -------HSFB2a(2)   <---------ARR14(2)  --------->AHL20(2)                             <---------TOE2(3) ------>HSFB2a(2)   --------->ARR14(2)  <---------AHL20(2)          ---------->DOF2--------->At4g35610   ttagaagtttttttttagaacaaatcctaaagaaaaatacaaaaaattaaataaaaaaacataagtttgttaaagaatacacatgagcttaggatttttt  13705000                                <------MYB83                                <------MYB46(1)                              <---------WOX13(1)                 --------->ANAC55(2)                                <---------AHL20(2)      ---------                 <---------ANAC58                                   --------->AHL20(2)      <--------                 <---------ANAC55(2)                              --------->CCA1(2)        <---------CCA1(2)                 <---------ANAC55(1)                             <---------ARR11(3)   <-----------GT1                 <---------ANAC58                           --------->YAB1        --------->AHL20(2)         <------ZmHOX2a(1)  --------->ATHB12          <-----------GT1             <---------AHL20(2)       <---------TOE2(3)   <---------YAB1---------->DOF2   <---------YAB1       --------->AHL20(2)  <---------MYB46(3)<-----------HVH21 <------ZmHOX2a(1) <---------YAB1          <---------AHL20(2)   gtgtttgttaaggactaatacgtgtcagtgtgattggtaaggagaaagagattgttttactattatagatataaatgtgtatatatatatactatatctc  13705100                                                                                        --------->ANAC55(2)                                                                                        --------->ANAC58                                                                                        <---------ANAC46                                                                                        --------->ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC55(1)                                                        ----------->GT1                 <---------ANAC58                                                    <-----------GT1                -------->ATHB1                                                 -------->HAHB4                    --------->ATHB51                                                 -------->ATHB1                    -------->HAHB4                                                 --------->YAB1                    <--------HAHB4                                                 --------->ATHB51                  <---------ICU4                                                 <--------HAHB4                   <---------YAB1                              <---------REM1(1)  <---------ICU4                   --------->ICU4                --------->ARR14(2)              <---------ATHB51                  <---------ATHB51                --------->GLK1(2)      <---------YAB1 --------->ANAC55(2)       <---------ICU4                <-----------ARR10 <---------ZAT2--------->ICU4                 <---------YAB1       <---------ICU4     <---------TOE2(3)     <---------YAB1      <---------ANAC58    --------->ANAC55(1)      --------->ICU4     ---------->DOF2<---------MYB46(3)          <---------ANAC58    <---------ANAC55(2)     --------->AHL20(2) <---------AHL20(2) ----------->GT1          ----------->GT1--------->YAB1 >ARR11(3)      <---------ARR14(2)<---------At4g35610 <---------ANAC55(2)      --------->ICU4 -ARR11(3)     <---------GLK1(2) ------->TEIL<---------YAB1  <---------YAB1  --------->YAB1   aacacataaaaattagagaatctgatttaaagatgaagctggtgattgtaattattacatgttaatattagcgtaataaacataattattacgtaagaaa  13705200                                       --------------->AGL15                                       <---------YAB1                               <---------RVE1(1)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <---------CCA1(1)                    <---------MYB46(3)                              --------->ARR11(3)                    ----------->GT1     ----------->GT1                   <---------ICU4      <---------------AGL15        <------MYB46(1)   --------->ZAT14                   --------->YAB1   <---------YAB1                  <------MYB83      <---------ZAT14                  <---------YAB1 <---------YAB1                   <--------P     >>>>>>>>>GATA-3                --------->YAB1<---------AHL20(1)               --------->MYB59   >>>>>>>>>GATA-1               XXXXXXXXXXXXXXXXXXXX>MIR823                     <---------TOE1(3) >>>>>>>>>GATA-2 ----              <---------WOX13(1) <---------AHL20(2)            <---------TOE2(3) >>>>>>>>>GATA-4-----           <---------YAB1     --------->AHL20(1)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<----     <---------AHL20(2)       <---------ARR11(3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)-----------     --------->AHL20(2) <---------ANAC55(2)       --------->At4g35610<-------GAMYB    <---------At4g35610   aaactttttaattttgatttataatcacataagatattattcttatttgagtagctacagaaatttaggttggttaagaagtggattgagcagtgaaaat  13705300  Previous    Next  AGI:  At1g36390.1    Description:  co-chaperone grpE family protein. similar to EMB1241 (EMBRYO DEFECTIVE 1241), adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization [Arabidopsis thaliana] (TAIR:AT5G17710.1); similar to EMB1241 (EMBRYO DEFECTIVE 1241), adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization [Arabidopsis thaliana] (TAIR:AT5G17710.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61787.1); contains InterPro domain GrpE nucleotide exchange factor, head; (InterPro:IPR009012); contains InterPro domain GrpE nucleotide exchange factor, coiled-coil; (InterPro:IPR013805) Range:  from: 13702880    to: 13704784    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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