AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                             <---------CCA1(1)
                                                             <---------RVE1(1)
                                               --------->MYB59
                                               <---------TOE1(3)                           ---------
                   <-------TEIL                <---------TOE2(3)                           <--------
             <---------AHL20(2)           <---------RVE1(1) --------->ARR11(3) <---------TOE2(3)
        <---------TOE2(3)                 <---------CCA1(1) <---------ARR11(3)---------->DOF2      <
       <-----------GT1              <----------DOF2        <------ZmHOX2a(1)<---------AHL20(2) -----
      <-----------GT1              <---------ANAC58      <---------TOE2(3)<---------YAB1<-----------GT1
--------DOF2--------->AHL20(2)     <---------ANAC58  <---------YAB1     --------->AHL20(2) <--------
 
ctttcggttttaacatttaatattcattttgttattttgctttggatatttaggttattttaggatatttttcgattattttaaagtatttttacttttt  13672600
                             <---------TOE2(2)
                             <---------TOE1(2)             <---------RVE1(1)
                          <---------ANAC58                 <---------CCA1(1)
                          <---------ANAC58                 --------->GLK1(1)
 <---------AHL20(2)       <---------ANAC46                <---------ARR14(2)
<---------AHL20(1)   <---------ICU4                    <---------ANAC46
--------->AHL20(1)   --------->ATHB51                 <---------LBD16
------>AGL15         --------->AHL20(2)     <---------AHL20(2)                          <-----------
-DAG2                <---------AHL20(2)     <---------YAB1--------->ARR14(2) --------->AHL20(1)
---------AHL20(2)   --------->ICU4         --------->AHL20(1)                <---------AHL20(1)
---->AHL20(2)    <---------AHL20(2)        --------->AHL20(2)                <---------ARR11(3)
--DOF2           --------->AHL20(2)        <---------AHL20(1)     <---------MYB46(3)    ------------
 
atatatattttcaagtgtttttaattatttcgtatgtttttgaaaatataattgtatttcggatatttttggttactcaaaatatttcggtttagtacaa  13672700
                       ------->TEIL
                    --------->ANAC55(2)              <-----------GT1
                    <---------ANAC55(2)         <---------AHL20(2)        <---------AtMYB61
<------MYB46(1)  <---------ARR14(2)            <---------AHL20(2)       <----------DOF2
<------MYB83     --------->ARR14(2)            --------->AHL20(2)      <---------ANAC58            -
----AtSPL8       <---------MYB52(1)        <---------YAB1     <---------MYB52(1)               <----
--->AtSPL8      <-------GAMYB            --------->AHL20(2)<-------TEIL<---------ANAC58        <----
 
atttggttttggttatttcggttacgaatttagtatatgttcgattatttttaaattttcgattcgttttttttgctttggttctggtttagtacatttg  13672800
                     <---------ARR14(2)
                     --------->ARR14(2)
               --------->GLK1(1)                          <----------DOF2
<------MYB46(1)<---------GLK1(1)                    --------->MYB59              ---------->DOF2
<------MYB83  <---------ARR14(2)      ----------->GT1<------MYB83         <-------TEIL
-------->MYB59<---------GLK1(2)       <------MYB83<---------MYB52(1)     --------->ARR11(3)
--MYB46(1)    --------->ARR14(2)      <------MYB46(1)<------MYB46(1)  <---------TOE1(3)
--MYB83 <-----------GT1--------------->AtSPL3<-----------GT1          <---------TOE2(3)
 
gttcggtctatttgccagatttcggttctgtacattttgttcggtttatttcggttcggttctttttgttgtcaaggttcttgagaaagacgagttgcta  13672900
                     <---------ANAC46
                     <---------ANAC58                                     --------->DAG2
                     <---------ANAC58       ---------->DOF2              ---------->DOF2     <------
                    <---------DEAR3(1) <------------CBF           <---------ICU4             -------
            >>>>>>>ZML2              <---------YAB1          ----------->GT1      <---------MYB52(1)
 
aaaccttgttatgttctagttgggccgtgttaatgggcctactattgaaaagcccttgaatatgaagaaaaattacaaaagtgccattagttcttcatct  13673000
                            --------->LBD16
                         *TSS
                        <-----------GT1
         --------->At4g35610------>NtERF2                         --------->REM1(1)
---At4g35610    >>>>>>>>>TBF1          <----------DOF2     ---------->DOF2  ---------->DOF2
-->At4g35610 >>>>>>>>>TBF1<---------LBD16        --------->YAB1  <-------TEIL                <------
 
ccctcacaactcagaagaagaagaatttctccggctaaaaccctttcttctatcatctatgcgaaagcttcatcttcttcaaagaaaatggtttcagtgt  13673100
                                                                                             <------
                                                                                        --------->YAB1
                                                                                        <---------ICU4
                                                                                       <---------ATHB12
                                                                                     --------->WOX13(1)
                                                                                   <------NtERF2
                                                                                  --------->ANAC58
                                                                                  --------->ANAC58
                               <----------DOF2                                    --------->LBD16
                              <---------ANAC58                                    ------>NtERF2
                              <---------ANAC58                                   --------->ATERF1(2)
                   <---------ZAT18                                               --------->DEAR3(1)
                   --------->ZAT14                                               <---------ATERF1(2)
     --------->YAB1<---------ZAT14                                              <---------LBD16  <--
    <---------ATHB12   <----------DOF2              ------>NtERF2    ------>ZmHOX2a(1) --------->ICU4
---ZAT6         ------>ZmHOX2a(1)      ----------->GT1   <---------MYB52(1)    <---------RAP2.3(1)
 
tattccaatcttcatgttcctgttcactttctagctttcgctctgtaaaattcggagcccgtttagtctctcctctgtatttcgccggcaatcatgttca  13673200
                                                                <---------ANAC58
                                                                <---------ANAC58
       <---------MYB52(1)                                       <---------ANAC46
      --------->LBD16         ---------->DOF2               <---------ANAC58
     <---------HSFB2a(2)   ----------->GT1                  <---------ANAC58
    <---------LBD16       --------->DAG2             <----------DOF2                   ---------->DOF2
-TEIL--------->HSFB2a(2)---------->DOF2           <---------TOE1(3)                  <<<<<<<<<MYB98
---------HVH21      --------->YAB1           <----------DOF2<---------ANAC46        --------->TOE2(3)
 
tgtcacttccggtagtcttccaatcggaaaaggtaaagactttcaaaacttttaagctttgtgacttgcttgctactatatggtctatgttaaagccttc  13673300
                      <---------REM1(2)                                <---------REM1(2)
                 <---------ANAC46                                 <---------ANAC58
                 <---------ANAC58         ------>ZmHOX2a(1)       <---------ANAC46         ------>ZmHOX2a(1)
                 <---------ANAC58        --------->TOE1(2)        <---------ANAC58        --------->TOE2(2)
             <---------ANAC58            --------->TOE2(2)    <---------ANAC58            --------->TOE1(2)
             <---------ANAC58     <<<<<<<<<MYB98              <---------ANAC58     <<<<<<<<<MYB98
         <----------DOF2         --------->TOE2(3)        <----------DOF2         --------->TOE2(3)
 
gaaagtttgtgactttacttgcttctacatggtctatgttaaatccttcgaaagtttgtgactttacttgcttctacatggtctatgttaaatccttcga  13673400
                    <---------REM1(2)                                        <---------ANAC58
               <---------ANAC58                                              <---------ANAC58
               <---------ANAC46                                      <----------DOF2
               <---------ANAC58                                     <---------ANAC58
           <---------ANAC58                             --------->ZAT6       <---------ANAC46
           <---------ANAC58                       <------ZmHOX2a(1) <---------ANAC58
       <----------DOF2              <---------MYB46(3) <---------TOE2(3)--------->MYB52(2)        --
 
aagtttgtgactttacttgcttctacatggtctatggtgttgttgattttagaggattaagactaagtcttgctttagttgcttacaaatggaactattt  13673500
<- Previous    Next ->

AGI:  At1g36320.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61774.1)
Range:  from: 13673026    to: 13675310    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version