Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <x                                                                                                  xxx                                                                                                 <---                                                                                                 <xxx                                                                                                <xxxx                                                                                               <xxxxx                                                                                               <xxxxx                                                                                               ------                                                                   <---------YAB1              ------                                 --------->ARR11(3)               <---------AHL20(1)           <-----                                 <---------AHL20(2)               <---------AHL20(2)           ------                                 <---------ARR11(3)          <---------AHL20(2)                <-----                                 --------->AHL20(1)          --------->ARR11(3)                <-----                                 <---------AHL20(1)          --------->AHL20(1)                ------                                 --------->AHL20(2)          --------->AHL20(2)               <------                              --------->AHL20(2)             <---------ARR11(3)               -------                           --------->YAB1              --------->YAB1                         <xxxxxx                        --------->YAB1                 ----------->GT1                        <------                       <---------YAB1             --------->AHL20(2)                       --------->AHL20(2)               <---------YAB1 <---------AHL20(2)<----------DOF2   --------->AHL20(1)   <---------AHL20(2)              <-----------GT1 --------->YAB1    <---------------AGL15       <---------TOE2(3)<xxxxxxx            <---------YAB1<---------YAB1        --------------->AGL15  <---------AHL20(2)  <---------AHL20(2) ------>AHL20(2)    --------->AHL20(2)         <-----------------AGL3  --------->AHL20(2) --------->AHL20(2) -------AHL20(2)    <---------AHL20(2)     <---------AHL20(2)<---------AHL20(1)       <---------AHL20(2)   ttaatttttcaaatattatcaatttatcataataatatattgtattttttcttttaatagtaatatattatatttattttggttattttttatttaatta  13641300                      --------->YAB1                     <---------ATHB12                    <xxxxxxxxxxxxxxxxsmallRNA(s)                   --------->ANAC46                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxsmallRNA(s)       --------->ANAC46       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxx>smallRNA(i)      <xxxxxxxxxxxxxxxxsmallRNA(i)      --------->MYB46(3)<xxxxxxxxxxxxxxxxsmallRNA(s)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxsmallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     xxxxxxxxxxxxxxxx>smallRNA(i)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxx>smallRNA(s)     <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxxxxxxxxxxxxxxx>smallRNA(i)    xxxxxxxxxxxxxxxx>smallRNA(s)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->PCF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <xxxxxxxxxxxxxxxxsmallRNA(s)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ZAT18<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(s)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(i)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                --------->MYB52(1) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        --------->MYB46(3)--------->MYB46(3) xxxxxxxxxxxxx>smallRNA(s)                 --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->LBD16    ------>MYB46(1) xxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ANAC58  <---------MYB46(2)             xxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->LBD16   <xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->ANAC58  <---------MYB59 <---------MYB46(3) -->HAHB4      <-----------GT1   --------->ANAC46  --------->MYB46(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->ATHB1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->MYB55(1)<xxxxxxxxxxxxxxxxsmallRNA(i) ---HAHB4 <xxxxxxxxxxxxxxxxsmallRNA(s)     --------->ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->ATHB51 <xxxxxxxxxxxxxxxxsmallRNA(s)  --------->RAP2.3(3)-------->P  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----ICU4<---------MYB52(1)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----AHL20(2)<xxxxxxxxxxxxxxxxsmallRNA(s)<---------ALFIN1  <xxxxxxxxxxxxxxxxsmallRNA(i)             < --->YAB1<xxxxxxxxxxxxxxxxsmallRNA(i)  --------->DEAR3(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----- ---YAB1<xxxxxxxxxxxxxxxxsmallRNA(s)   ------->GAMYB<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       ----- -->ICU4<xxxxxxxxxxxxxxxxsmallRNA(i)   --------->RAP2.6(2)xxxxxxxxxxxxxxxx>smallRNA(i)          ----- xxxxxxxxxxxxxxxxxsmallRNA(le3) <---------LBD16 <xxxxxxxxxxxxxxxxsmallRNA(s)   <xxxxxxxxxxxxxxxxsmallRNA(i) ---ATHB51<xxxxxxxxxxxxxxxxsmallRNA(i)--------->MYB46(3) <xxxxxxxxxxxxxxxxsmallRNA(s)           ----- xxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxx   ttatcgcacccgctggtttaccagtcataaaactcccgcaaccgcacccattaccaaacgctcaaccagtcgttcaaaacacttgataacgcttgaaacc  13641400                                     <---------ARR14(2)              <---------MYB52(1)   <---------SPL7             --------->LBD16      ------->GAMYB            --------->ANAC55(2)  <------------AtMYB77         <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ARR14(2)         <---------ARR14(2) --------->YAB1         --------->ARR14(2) ------->GAMYB  <----------DOF2  --------->DEAR3(1)        --------->ANAC46  ------->GAMYB--------->ARR14(2)--------------->AtSPL3 --------->DEAR3(2)         --------->TOE1(3) xxxxxxxxxxxxxxxx>smallRNA(i)  --------->MYB52(1) --------->ATERF1(1)       <------------AtMYB77 --------->MYB46(3)    --------->LBD16   --------->At4g35610 <------------AtMYB77 --------->LBD16------->TEIL <---------MYB55(2)   --------->ANAC58   --------->LBD16 xxxx>smallRNA(fl3)   --------->ANAC58  --------->ANAC46 xxx>smallRNA(si3)    --------->ANAC46 --------->MYB46(3)                         --------->MYB52(2) ---------ATERF1(1)  <---------LBD16 --------->SPL7                             <---------MYB52(1) ---->ANAC58<---------ANAC46--------->TOE2(3)                                  --------->TOE2(3) ---->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                             ------->TEIL ---->ANAC46<---------ANAC55(2)<---------ARR14(2)                          <---------ZAT14 ---->RAP2.6(2)--------->ZAT14 --------->ARR14(2)  <-----------GT1         <---------ZAT18 xxxx>smallRNA(s)   xxxxxxxxxxxxxxxx>smallRNA(i) <---------AHL20(2)       <---------ZAT6   gcaaccgcccgtttccgtaaactcccgcaaccgtaaccgtacccgctgtatttaaaccagtctggccctaaggctagtgtacgttagtttctccaaattt  13641500                                  --------->ANAC55(2)                             <------NtERF2                            --------->LBD16                            <---------RAP2.6(3)                            ------>NtERF2                           --------->ATERF1(2)                           --------->RAP2.6(2)                           <---------ATERF1(2)                          <---------LBD16                          --------->RAP2.6(3)                         <---------At4g35610      <-----------GT1       <---------AHL20(2)                      <---------MYB52(1)   <-----------GT1  <---------TOE1(2)  --------->At4g35610                    <---------ANAC46      <-----------GT1 <----------DOF2      <---------At4g35610                    <---------ANAC58    --------->YAB1<----------DOF2  <---------AHL20(2)                    <---------ANAC58<---------AHL20(2)------>ZmHOX2a(1)<---------AHL20(1)       <-----------ARR10 --------->At4g35610     <---------CCA1(2)     --------->AHL20(2)   ---------   gtttgggcaaaacttccctcttccgtctgccggcatatgtaattttaacttatatcctttctttggttcttaataaaattcagatgacaaaaaaaaaaat  13641600                                                                                                    -                                                                                                    <                                                                                                 <---            --------->TOE2(3)                                                                    ----       --------->YAB1                       ------>MYB46(1)     <---------AHL20(2)      <---------AHL20(2) --------->ANAC58                           ------>MYB83       --------->AHL20(2)      --------->AHL20(2) --------->ANAC58      <---------ATHB12   <---------MYB59      <---------AHL20(2)      <---------AHL20(2) >AHL20(2)<-----------GT1        --------->MYB52(1)       --------->ICU4           --------->AHL20(2)   cgcaaacaaatataacttaattcaaatcaagaacaaaacgataaccaaactaaattagaaatgattttaatttctgtataaccgataaaataaatagcag  13641700            ------>MYB46(1)            --------->MYB52(1)            ------>MYB83          --------->AtMYB61          <---------MYB59       ------>MYB46(1)       ------>MYB83     --------->AtMYB61     <---------MYB59      ------>ZmHOX2a(2)  ------>MYB83           <------ZmHOX2a(2)  ------>MYB46(1)       <---------ARR14(2) -------->AtMYB61    --------->DEAR3(2) ---------MYB59      --------->MYB46(3)                                                        ------ ------ARR14(2)     *TSS--------->ARR14(2)    <----------DOF2                               --------- ----->ARR14(2) --------->LBD16   --------->YAB1   <<<<<<<<<TBF1           ----------->GT1  ---------   aaccaaaccaaaccaaaccgcgaaccgatctcgcactcatattgctctctttcttcttctctatatgctctgttttcgagtaaattgccataaaccctaa  13641800                                                                                            ---------                                                                                           --------->ARR11(3)                                                     --------->LBD16                       --------->GLK1(2)                                     --------->AtMYB61------>NtERF2                        <---------ARR11(3) ---->DOF2          <---------AHL20(2)              <---------RAP2.6(2)                --------->YAB1 >TOE1(3)    <---------At4g35610   ------>NtERF2   <---------LBD16              <-----------GT1 >TOE2(3)    --------->At4g35610  --------->RAP2.6(2)------>NtERF2         <----------DOF2<---------GLK1(2)   atcacacaaaaatggagctcaatttatcttcgatggccaccaaaatcccttgttccggccttatacccataagaagtcttttaaacccatcaaaatctct  13641900                                                                                                    <                                               --------->ANAC58            <----------DOF2       <---   --------->At4g35610                         --------->ANAC58      ---------->DOF2             <---   <---------At4g35610 <------------------------ANAC81           <---------TOE2(3)       --------->ANAC58 >RVE1(1)       <-------TEIL        ------>ZmHOX2a(1)          ---------->DOF2           --------->ANAC58   gtctcatcttccaagagtttcattctctgtttcttctcctcattctctcaagctaatgacttcaacaaaggtaaagcctttctctagtttcaagcctatt  13642000                                                                       --------->LBD16                                                                      --------->HSFB2a(2)           <                                                                      <---------HSFB2a(2)        ---- ----------DOF2                  ------->TEIL            <---------ANAC58                     <------ --------GT1           <---------YAB1  <----------DOF2   <---------ANAC58         <---------At4g35610 ------AHL20(2)      <---------At4g35610  --------->MYB52(2) <---------ZAT6  <----------DOF2---------   tactttgtgggtttttgtatgtaatctgataaatgaatatactttagttgatagcaatggctagtgcaagttccagagactttgagatgtcgaatttaac  13642100        <---------DAG2                  <------ZmHOX2a(1) ----------DOF2       --------->ATHB12<---------TOE2(3)                                 <---------ANAC58 --->GAMYB        ------->TEIL  --------->DAG2                                     --------->LBD16 -----GT1<----------DOF2  <---------LBD16      <---------ANAC58            ------>ZmHOX2a(2) >AHL20(2)   <---------AtLEC2  ---------->DOF2 <---------ANAC58       <---------WOX13(1)<---------ANAC58   agcattatcgcctttggatggacgttattggggaaaagttaaggacttggcttcttctatgagcgagtttggattgatctatttccgagtacttgtcgag  13642200  Previous    Next  AGI:  At1g36280.1    Description:  adenylosuccinate lyase, putative / adenylosuccinase, putative. similar to adenylosuccinate lyase, putative / adenylosuccinase, putative [Arabidopsis thaliana] (TAIR:AT4G18440.1); similar to adenylosuccinate-AMP lyase [Vigna unguiculata] (GB:AAL48316.1); similar to adenylosuccinate lyase [Nicotiana tabacum] (GB:AAR06293.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81287.1); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948); contains InterPro domain Fumarate lyase; (InterPro:IPR000362); contains InterPro domain Adenylosuccinate lyase C-terminal (InterPro:IPR013539); contains InterPro domain Adenylosuccinate lyase; ( Range:  from: 13641720    to: 13644229    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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