Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <------MYB83                                               <---------------AGL15           <------MYB46(1)                                            ===============================           <---------ANAC58                                      --------->LBD16           <---------ANAC58             --------->ANAC58        <---------ANAC55(2)              ----          <---------MYB46(3)            --------->ANAC58        --------->ANAC55(2)             <----        <---------MYB52(1)      --------->LBD16              ------->TEIL  --------->YAB1   <--------     xxxxxxxxxxxxxxxx>smallRNA(s)<------ZmHOX2a(1)         <-------TEIL <---------CCA1(2)   ------>ZmHOX2a(1) <-----------ARR10            <---------LBD16     <-------TEIL  --------->ANAC46        <-----------GT1   gagcatctacgttgggttcttcacttatattttcaggaaatgaagcaatagtttcatgaaatgcatccgtaaccatatcatgaaatctattttcctgatt  13581800                                                        <-----------GT1                                                    <---------YAB1                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                               --------->ATHB51                                               <--------HAHB4                                               <---------ICU4           ------>NtERF2                                              <---------YAB1           --------->ANAC46                      <-------TEIL          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          ------>MYB46(1)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------MYB59                     <---------ICU4          --------->ANAC46    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)    --------->YAB1        <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <--------HAHB4 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ========================MADS_MADS<---------YAB1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->KAN4(2)    --------->MYB59 --------->ICU4 <---------YAB1   <---------ANAC58    <-----------GT1 -----ICU4------>MYB83xxxxxxxxxxxxxxxx>smallRNA(s)--------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -YAB1 ----------------->AG     --------->YAB1--------->ICU4   <--------P    --------->ATHB51   atgcccataaccaaattgatcaggtacatgctgaccataattcgcatcattattaaaattactaggttgctcgacaccataatttgtattactagttcat  13581900                        --------->ANAC55(2)                        --------->ANAC58                        --------->ANAC58                        <---------ANAC58                        <---------ANAC58                        <---------ANAC55(2)                        --------->TGA2(1)                        --------->bZIP60(1)                        <---------bZIP60(1)                        <---------TGA2(1)                      <---------TGA2(2)                     ----------->HVH21                                  <----------DOF2<---------YAB1             ------->GAMYB                                              <---------DAG2<---------AHL20(2)         --------->MYB46(3)                                  --------->YAB1           --------->AHL20(2)         --------->REM1(1)                                  <---------YAB1         --------->TOE2(3)    --------->ZAT6   ----------->TGA1                   ------>ZmHOX2a(1)    <-----------GT1   gcgctatctctacaaccctctccatgacgtaaccagacatagtagtttggcataaatcctctattataaacatgctttttgactacattaaaattccaaa  13582000                                                                      <---------ANAC58              -                                                                      <---------ANAC46       xxxxxxxx                                                                 <---------MYB46(3)       --------->DEAR3(1)                                                                 --------->MYB52(2)     <---------ZAT18                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)          --------->LBD16                              <---------GLK1(2)                  <-----------RAV1(1)    <---------ZAT14                  --------->ANAC58   <-----------GT1           <---------MYB52(1)     <---------LBD16                  --------->ANAC46<---------------AtSPL3     --------->MYB52(2)--------->ANAC46    <-         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)     --------->ANAC58    <---------ANAC58--------->ZAT18         xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ANAC58 ---------->ID1 ------->TEIL   ----   <---------YAB1 --------->ANAC58<---------------AtSPL8    <-------TEIL    <-------TEIL--------->ZAT14   tatttctcattgagacacttacgacatggacagaatattgtaccgttctcacgagcaaatggttcgtttgtcgcttgatacatgaaactgcgcagtccgt  13582100                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                --------->AtMYB61               --------->bZIP60(2)               --------->O2                                                                      ----           <-----------HVH21            <---------------AtSPL8                                 <-----          --------->ANAC46              <---------------AtSPL3                               <-------          --------->bZIP60(1)           --------------->AtSPL8                              <--------          --------->O2                 >>>>>>>>>ARR1                                        ---------          <---------O2 <---------MYB52(1)                                              --------->ANAC58          --------->TGA1a              >>>>>>>>>ARR2                                   --------->ANAC58          <---------TGA1a       ------>ZmHOX2a(2)                                      --------->ANAC46  <-----------GT1----------->HVH21    --------->ATHB12                            --------->ANAC58 -------->YAB1 --------->At4g35610    --------->YAB1                              --------->ANAC58 xxxxxxxxxxxxx>smallRNA(se3)  <---------ARR11(3)                        <---------TOE1(2)<---------ARR11(3) --------YAB1  <---------At4g35610   <---------YAB1           ----------->GT1     --------->ANAC46<-- ----->YAB1<-----------TGA1------>ZmHOX2a(1)                <---------ANAC46    <---------ALFIN1 <---   cataatactctctcgtcacctcaccggtccttgatctctatgattgtacatccaacttcgtaatgtgtaaatctcatgttctccaccccaagacattatt  13582200                                                                                              <------                                                                                            <--------                                                                                        <---------TOE2(2)                                                                                     <---------ANAC55(2)                                                                                     <---------ANAC55(1) ----->ARR11(3)                                                                      <---------ANAC58 ----YAB1                                                                            <---------ANAC58 --ICU4                                                                         --------->ANAC46<---- -YAB1                                                               --------->ATHB12<---------ANAC46 >ICU4  *TSS                                                        --------->ICU4   --------->ANAC55(2) -------YAB1                     <---------AHL20(2)     <---------YAB1          <xxxxxxxxxxxxxxxxxxxx ------ARR11(3)          ---------->DOF2       --------->AHL20(2)   <---------YAB1<---------MYB52(1)   atctttgtaagaagttttttttttttgaaaagaatttttttgtttgtaagtaaatgttgtgatttgagttatgatttcttagacgttacgtaggctattt  13582300                                                                              -------->P                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                             --------->MYB55(1)                                                                            <---------MYB111(2)                                                                            <---------MYB46(2)                                                                            <---------MYB111(1)                                                                            --------->AtMYB61                                                                            <---------MYB55(2)                                                                            --------->MYB46(3)                                                                           --------->MYB46(3)                                                                         --------->MYB55(1)                                                                        --------->MYB46(3)                                                                        <---------MYB59                                                                        <---------MYB55(2)                                                                        <---------MYB111(2)                                                                        <---------MYB46(2)                                                                        <---------MYB111(1)                                                                      -------->P                                                                      ------>MYB46(1)                        --------->CCA1(2)                             ------>MYB83               ----                       <---------ARR14(2)                        --------->ARR14(2)              <---                       --------->ARR14(2)                        <---------ARR14(2)         <--------             <---------AHL20(1)                                  --------->GLK1(2)    <---------HSFB2a(2)             --------->AHL20(1)                                 <---------GLK1(1)     <------MYB83 <---------ARR11(3)    <---------GLK1(2)                        --------->GLK1(1)    --------->MYB59 --------->ARR11(3)<---------ANAC58  --------->DAG2            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -----TBP --------->AHL20(2)    <------ZmHOX2a(1)         <---------ANAC58-------->P --------->MYB46(2) -------AGL15--------->ARR11(3)----------->GT1            <---------ANAC46------>MYB46(1)   --------- -----AHL20(2)     <---------ANAC58 ---------->DOF2       <---------ANAC58------>MYB83----------->GT1 xxsmallRNA(le3)  <---------------------WRI1       <------ZmHOX2a(1) ------>ZmHOX2a(1)<------MYB46(1)   atagatattccaaaaaatattgcgagatttgctaggaaaaaagttttttgctaggaatttgcgagggaatcctacctaccaaccagttcggtaagataat  13582400                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   --------->LBD16                  --------->ANAC58                  --------->ANAC46              ------>MYB83              ------>MYB46(1)             --------->MYB55(1)             ----------->HVH21            <---------MYB59            <---------MYB46(2)            <---------MYB111(1)            <---------MYB52(2)            --------->AtMYB61        <-----------HVH21            <---------MYB111(2)  --------->GLK1(2)                           <---------ANAC58           <---------At4g35610   --------->ARR14(2)                          <---------ANAC58           --------->ANAC55(2)   <---------ARR14(2)                         <-------TEIL           --------->At4g35610  <---------GLK1(1)                          --------->ALFIN1         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <-----------HVH21       <-----------HVH21    --------->ANAC58                      <---------DEAR3(1)     --------->ALFIN1---------->DOF2--------->ANAC46              --------->ANAC46    ------->MYC3  --------->ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ------->PIF5    <-------MYC3 ------->GAMYB  <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------ANAC58                    < ----->AHL20(2)  <---------LBD16--------->GLK1(1)               <---------ANAC46                <---- ------AHL20(2)-------->P   --------->ANAC58                    <---------ANAC58                ----- -ARR11(3) <xxxxxxxxxxxxxxxxsmallRNA(i)      xxxxxxxxxxxxxxxx>smallRNA(i) <-------PIF5<xxxxxxxxxxxxxx >ARR11(3) <---------ANAC55(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<------NtERF2   --------->ARR14(2)   ttaaaacgtggtcacctaacccgcaaagactcgcaaatccgtcgcaaaatttgctacagaatagttgcgcgtcgcaagtgcgtcgcaatctgcaagggat  13582500                               <---------O2                  --------->ANAC58     <---------ANAC46                  --------->ANAC58     <---------ANAC58   --------->AtLEC2            <---------ALFIN1   <---------ANAC46           --------->ANAC55(1)           --------->At4g35610 ===============bZIP_DOF    --------->ANAC46           --------->GLK1(1)   --------->O2               --------->ANAC58           <---------At4g35610 <---------TGA1a <---------ICU4        --------->ANAC46       --------->ANAC46        --------->TGA1a --------->YAB1        --------->ANAC58       --------->ANAC58        --------->bZIP60(2)        --------->ANAC58       --------->ANAC58<---------ARR14(2)     --------->ICU4         --------->ANAC58 <-----------HVH21--------->ANAC46 <----------DOF2   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------ANAC58  <---------LBD16        --------->ANAC58 -----GLK1(1)------->GAMYB  ----------->HVH21----------------------->TaNAC69(2) --------->ANAC58   <- ---->GLK1(1)============================MYC_MYB   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------ANAC58 xxxxxxxxsmallRNA(i2)  --------->ARR14(2)  <------ZmHOX2a(1)        ------>ZmHOX2a(1)     <---------ANAC58   ttctgtcactcgcaactccctcgcaaatatgcgacgtctttgcgaggaatcatggtttccacgcaatttcctcgcaaacgtctcgcaattttgcgagaga  13582600                                                                                     <---------CCA1(1)                                                                                     <---------RVE1(1)                                                                              <---------ANAC46                                         <----------DOF2                      <---------ANAC58    <-------GAMYB                <--------P                                   <---------ANAC58   --------->MYB52(2)       <---------ANAC46                             <xxxxxxxxxxxxxxxxsmallRNA(i)   <---------MYB46(3)       <---------ANAC58                   --------->GLK1(2)    <---------ARR11(3)  <-------TEIL   ----------->HVH21<---------MYB46(3) xxxxxxxxxxxxxxx>smallRNA(se3)  --------->ARR11(3) --------HSFB2a(1)          <---------ANAC58        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<-----------GT1   aatgttcgttgcaaattttgcgacggagtagcgaggttgttctctttcatcgcaaacgtcttgcaattctgtagcaatttgcgagggatattttccattg  13582700  Previous    Next  AGI:  At1g36200.1    Description:  transposable element gene. CACTA-like transposase family (Tnp2/En/Spm), has a 1.7e-150 P-value blast match to GB:CAA40555 TNP2 (CACTA-element) (Antirrhinum majus) Range:  from: 13578667    to: 13582208    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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