Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <----------DOF2                                                                                --------->TOE2(3)                                                                                --------->TOE1(3)                                                                <---------AHL20(2)                                                     <---------ARR11(3)      <-----------GT1                                                     --------->ARR11(3)  <--------HAHB4                                                     --------->GLK1(2)  <---------YAB1           <---------ARR14(2)                 --------->ANAC46 <---------AHL20(2)           --------->ARR14(2)              <-------TEIL   <---------MYB52(1) <---------AHL20(2)          <---------CCA1(2)               --------->CCA1(2)    --------->AHL20(2)--------->DOF5.7(2)-       <-------TEIL              --------->YAB1     --------->RVE1(1) <---------ZAT6            ----- <---------TOE2(3)              <---------ATHB12  --------->AHL20(2)--------->YAB1          <--------   tttaagaaattcgtatccgatttttaaaattcaaatcatattagatacacaaaaaaatctgtttttttaatagtattattaactttaactaagtaatatt  13546800                                                                                                    -                                                        <----------DOF2                             -     --------->AHL20(2)                              <-----------GT1                                -   --------->AHL20(2)                              <-----------GT1                                ===  --------->YAB1        ---------->DOF2       --------->YAB1          --------->ANAC46            --- -------->AHL20(2)     <---------AHL20(2)  <-----------GT1          <---------ALFIN1         -------- ------>GT1         --------->YAB1       --------->AHL20(2)      XXXXXXXXXXXXXXXXXXXXX>MIR830*------>ZmHOX2a(1) -YAB1    ----------->GT1                <---------AHL20(2)  ------>ZmHOX2a(1)             ------>ZmHOX2a(1)   gttaaaataatatagtaaacaatattaaaagggatggacatattttaatcatatttctctttcctcttctccacataactcaaacttctcttcctcctta  13546900           --------->YAB1                            <---------YAB1     --------->TGA1a                            ---------->DOF2     --------->bZIP60(2)                     <----------DOF2     --------->O2                           <------NtERF2                          --------->bZIP60(1)     --------->REM1(1)                     ------>NtERF2                           <---------bZIP60(1)     ===================================================bZIP_DOF                 <-------GAMYB      <   ----------->RAV1(1)                    --------->ANAC46                      --------->ALFIN1    - -------->ANAC58                          --------->ANAC58                    --------->ALFIN1   ==== -------->ANAC46                          --------->ANAC58            ----------->HVH21          ---- -------->ANAC58  <-----------GT1       --------->ANAC58            <---------ANAC46 <---------YAB1 = ==============bZIP_DOF                 --------->ANAC46       --------->ARR11(3)==================== ------->DOF2    --------->AHL20(2)     --------->ANAC58   ---------->DOF2 <------ZmHOX2a(1) -------- ->TOE2(3)--------->At4g35610        <---------REM1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->ANAC46   aaaagccacatcagcataatttactacgcttctgttttcttcacgcgccttaatgctgaatgaaagaactgggtgaaggagtgtgttgtcattacacaac  13547000                                                                                          <---------ARR14(3)                                                                                          <----------                                                                                          --------->AGP1                                                                                          --------->ARR14(2)                                  ----------->GT1                                         --------->ARR11(3)                                  <------MYB46(1)                                         <---------ARR14(2)                          <-----------------AG                                            <---------ARR11(3)                      <----------DOF2                                                     --------->ARR14(3)                   --------->ARR11(3)                                                 ---------->DOF2         <---------ANAC55(2)  --------->GLK1(2)                                     <---------AHL20(2)    <---------ZAT6 <---------ARR11(3)                                            <---------AHL20(2) ---------TGA1a    <---------AHL20(1)                                          <---------YAB1 -------->TGA1a<---------AHL20(2) <------MYB83              <-------TEIL    --------->AHL20(2) =========MYC_MYB --------->CCA1(1)                 --------->ANAC58        <---------AHL20(2) --->GAMYB    --------->AHL20(2) --------->MYB59    --------->ANAC58     --------->ARR11(3) ------>ZmHOX2a(2) ================================bZIP_DOF           --------->ANAC46     <---------ARR11(3)<------ZmHOX2a(2) =========MYC_MYB --------->RVE1(1)        <---------At4g35610   --------->TOE2(3)<---------YAB1 <--- ->ANAC46--------->ANAC55(2) <---------GLK1(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->RVE1(1)   tcacttgtgttacttatttaatatcttttcagaatttggttatttagctaattcacccaaaattcattctcaatagattttattattttaaagatcttcc  13547100                             --------->YAB1                            --------->MYB46(3)                            <---------MYB55(2)                            <---------ATHB12                           ------>MYB83                           -------->P                     --------->WRKY38(1)                     --------->WRKY12                                                ------>NtERF2              ---------->DOF2------->GAMYB                             <---------ZAT14            --------->AHL20(2)    ----------->RAV1(2)                  --------->ZAT14         <--------HAHB4    ------>MYB46(1)                             <---------ZAT18         <---------ICU4  --------->MYB46(3)             --------->WOX13(1)          *TSS        --------->ICU4   --------->AtMYB61  ---------->DOF2            --------->ZAT18     <---------YAB1  --------->WRKY45   <----------DOF2--------->AHL20(2)           ----------->HVH21  ----------->TGA1--------->ALFIN1<---------At4g35610  <---------AHL20(2)        <---------ANAC46 -ARR10 <---------YAB1<---------WRKY18(1) ----------->TBP <---------ATHB12     --------->MYB52(1) -------DOF2<---------AHL20(2)    --------->At4g35610 --------->AHL20(2)    --------->YAB1         --   ttttatgacgataattaaaagtgttgaccaaccatcatctggctttaaaagcccaaattaatcaagggattagtccactaataacggggacagttttttt  13547200                                   <---------MYB46(3)                                <---------ANAC58                                <---------ANAC58                                <---------ANAC46     <---------ICU4       <---------ARR14(2)  --------->YAB1 --------->TOE1(3) <------MYB83 ----------->GT1 <---------YAB1  --------->TOE2(3) <------MYB46(1)          <---------At4g35610 <---------ANAC46 ------->YAB1  -------->P --------->ARR14(2)    <---------ANAC46     <----------DOF2      <---------ZAT6   tttataatacttatactaaccttgagactatctggcttggttaccaagttttgtgaaaatggagatgagagctttgggttcttcgtgttctactggtaat  13547300                                                                    --------->At4g35610                                  <---------AtLEC2                  --------->ZAT2                 <-                             --------->ARR11(3)                     <---------ZAT2                 --                             <---------ARR11(3)           ----------->HVH21                        <-      <---------At4g35610   <---------CCA1(2)             --------->ETT(2)                   --------      --------->At4g35610  --------->ARR11(3)           --------->LBD16                  --------->TOE2(3)  --------->ARR14(2)       <---------AHL20(1)          <---------ANAC46                  --------->TOE1(3)  --------->GLK1(2)        <---------ARR11(3)       <-----------GT1 <---------At4g35610 --------->HSFC1(2)  <-----------ARR10   --------->ANAC58      ----------->RAV1(1)  ---------->DOF2        <---------HSFB2a(1)  <---------ARR14(2)  --------->ANAC58  <------ZmHOX2a(2) <---------ETT(2)              <---------HSFC1(2)   ggaggttctgctccgattaccctcacgaatatatctccatggatcacaacagtttttccgtcgacagtgaagctgagaagtagtttgagaaccttcaaag  13547400                                                                                                  ---                                                                                                  ===                                                                                                -----                                                                                       ==============                                                                                       ==============                                                                         ============================                                                                         ------>ZmHOX2a(1)  ---------                                                                     --------->ARR14(2)==============   <---------ANAC46                                            ----------->RAV1(1)     ------>ZmHOX2a(1) --------HSFC1(2)      ---------->DOF2                         --------->MYB52(1)     --------->TOE2(3) ------->HSFC1(2)   <----------DOF2                         ------>MYB83 ============================ --------HSFB2a(1) --------->TOE2(3) <---------HSFB2a(2)    ------>MYB46(1)  <---------MYB52(1) <---- -->DOF2         --------->GLK1(2)   --------->HSFB2a(2)  <---------MYB59============================   gagtttcgtcaagagtgagaacctttaaaggagtttcttcgacaagagttttgtctcggaccaaacaacagtttcctctgttttgtttcctaaaccctga  13547500       ------>ZmHOX2a(1)   ------>ZmHOX2a(2)  --------->GLK1(1)  <------ZmHOX2a(2)  <---------GLK1(1) <---------ARR14(2) --------->ARR14(2) --->ZmHOX2a(2) =============HOX2a_HOX2a ---->ARR14(2) ====HOX2a_HOX2a =========HOX2a_HOX2a ========HOX2a_HOX2a                                  <---------WOX13(1)    ------>ZmHOX2a(1) -->RAV1(2)                                         --------->ATHB12     <-----------GT1 ========HOX2a_HOX2a                      <---------ANAC58      ---------->ID1 ====HOX2a_HOX2a                 <---------CCA1(2) <---------YAB1   <----------DOF2                 < -----ARR14(2)     ----------->GT1   <----------DOF2<---------ICU4  <---------DAG2          ------->TEIL =========HOX2a_HOX2a    <----------DOF2  <---------ANAC58     <-----------GT1      ----------->HVH21   tccgatctccttcttggaaaatggtttctttctctctatcttttgcttaacttatgattgcattttttcgcttttttcctatacatttgacatgaatttg  13547600                                   <---------ANAC58                                   <---------ANAC58                                                 <                                  --------->ZAT2                                                   <-                                 <---------TOE1(2)                                                 <-                    <---------MYB46(3)                                                          -----           --------->YAB1       ------>ZmHOX2a(1)                                          --------->ANAC46          <---------YAB1    <---------ARR14(2)                                             --------->ANAC58    --------->At4g35610     --------->ARR14(2)                                             --------->bZIP60(2) -----------HVH21  <---------TOE2(2)                               <-----------GT1         --------->ANAC58   tctgtcatctctatgataacgctggtttcgaatcctagcttacattgagttccaacatgtttgtgggattaaccaatttgtttatgttctcccaagtcat  13547700  Previous    Next  AGI:  At1g36180.1    Description:  ATP binding / biotin binding / catalytic/ ligase. similar to ACC1 (ACETYL-COENZYME A CARBOXYLASE 1), acetyl-CoA carboxylase [Arabidopsis thaliana] (TAIR:AT1G36160.1); similar to acetyl-CoA carboxylase [Medicago sativa] (GB:AAB42144.1); similar to acetyl-CoA carboxylase [Brassica napus] (GB:CAC19875.1); similar to acetyl-CoA carboxylase [Brassica napus] (GB:CAA54683.1); contains InterPro domain PreATP-grasp-like fold; (InterPro:IPR016185); contains InterPro domain Acetyl-coenzyme A carboxyltransferase, C-terminal; (InterPro:IPR011763); contains InterPro domain Carbamoyl phosphate synthetase, large subunit, ATP-binding; (InterPro:IPR005479); co Range:  from: 13547184    to: 13559704    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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