Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------TOE1(2)                         --------->HSFB2a(2)             <---------TOE2(2)                         <---------HSFB2a(2)       <---------TOE2(3)     --------->AHL20(2)                         <-----------GT1                 ---------->DOF2 <---------YAB1                              <---------YAB1             <---------TOE2(3) ------>ZmHOX2a(1)                          <---------AHL20(2)       <---------AHL20(2)           <-- -------->TOE2(3)  <-----------GT1          --------->AHL20(2)       --------->AHL20(2)        <-----   atcctaattaactcatatgttttacaagaacaaaacacaatactatttttatacgttccaaaactttgtattttaatgtttctaaagttatagcaatatg  13206200                                                   <---------RVE1(1)               --------->AHL20(2)                  <---------CCA1(1)               <---------AHL20(2)      <---------AHL20(2)              --------->AHL20(2)       --------->AHL20(2)                                   <------ZmHOX2a(1)        --------->TOE2(3)          <---------AHL20(2)           >>>>>>>>>MYB98   <---------AHL20(2)  <---------REM1(1)                --------->AHL20(1)          <-----------GT1   --------->AHL20(2)  --------->bZIP60(1)             --------->AHL20(2)          <-----------GT1------>ZmHOX2a(1) ------  <---------bZIP60(1)        <---------AHL20(2)   <---------ARR11(3)         --------------->AGL15  - -------WOX13(1)     <----------ID1--------->AHL20(2)<---------AHL20(2) <----------DOF2 <---------YAB1 ----YAB1 --------->AHL20(2) --------->AHL20(2)   --------->ARR11(3)<---------GLK1(2)<---------AHL20(2)   actgatgtaacataaatttaaaaaaaacaaattaaaaaaaattaaaaaatgagatttttttgttttaacatattctttcctatttatattatgaggatta  13206300                                               --------->AHL20(1)                                               <---------AHL20(2)                                               <---------AHL20(1)                                          <---------AHL20(2)                                    --------->AHL20(2)                                  ------>MYB83 --------->AHL20(2)                           <---------MYB52(2) --------->AHL20(2)              >>>>>>>>>RAP2.2   <---------AHL20(2)      --------->MYB46(3) <---------AHL20(2)           <---------CCA1(2) --->AHL20(2)            <-----------GT1--------->ANAC55(2)              --------->AHL20(2) ---------->GT1<-----------HVH21  ------>MYB46(1)             <---------AHL20(2)---------->DOF2   tatagtaaattttgcaatgtcactaattaacaaaccaaatatatgtaattaaatttagaaattttaaaatgagatttatatctaaagtattgcaatgtcc  13206400                                                            --------->ANAC58                                                            --------->ANAC58          <---------At5g28300   -------->HAHB4            ---------->DOF2         <-----------GT1        --------->YAB1        ----------->GT1     <---------AHL20(2)        --------->ICU4       ---------->DOF2                <---------AHL20(2)     --------->AHL20(2) <---------AHL20(2)      <---------TOE2(3)        --------->GLK1(2)    --------->AHL20(2)  --------->AHL20(2) <---------AHL20(2)     <---------ARR11(3)      <----------   ctaatataaaattaccgatttagaaattaaaaaatgatggtgtttttatttatgtaaagttaaagcaagataactaatctgatattaaaaattaacaaaa  13206500                        --------->AHL20(2)                  ----------->GT1             --------->AHL20(2)             --------->AHL20(1)                                     <------------CBF             <---------AHL20(2)                                   --------->AHL20(1)            <---------AHL20(2)          --------->AHL20(2)        <---------AHL20(2)               --            --------->AHL20(2)          <---------AHL20(2)        --------->AHL20(2)         *TSS ---        --------->AHL20(2)          ----------->GT1        ------------------------>ANAC81  ---------        <---------AHL20(2)         <---------YAB1         ----------->GT1                ----------->RAV1(1) -GT1  --------->AHL20(2)        ----------->GT1  ---------->DOF2--------->AHL20(2)  <------ZmHOX2a(1)   caaaacatataaaattaaattagaaaataaacaaaatgtgattaaaatgatataaagagagagtcaaaaaaattggagaagagggaaggagcaacaaaga  13206600                                                           --------------->AGL15                                                           <---------------AGL15                                                          ----------------->AG                                                  ------>MYB46(1)                                                  ------>MYB83                                                 ----------->RAV1(1)           <---------ALFIN1 ------->DAG2         <<<<<<<<<TBF1            --------->MYB46(3)   <----------ID1 ------->DOF2      <<<<<<<<<TBF1          >>>>>>>>>TBF1   <-----------------AGL3 ->DOF2    --------->YAB1           <------ZmHOX2a(2)     ----------------->AGL3             ------>ZmHOX2a(1)   aaaagtctgtttatcatcttcttcttcttcaaatcgagatcgaagaagaaccaacaaaaaaccaaaaatggagacgaagccaaaccctagacgtccttca  13206700                                               --------->LBD16                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                   --------->ICU4                                   <------ZmHOX2a(2)                                       <---------ZAT14                                  --------->ARR11(3)                                       <---------REM1(2)                                  <---------ARR11(3)                                 ------>MYB83                   --------->ANAC46<---------YAB1                                    ------>MYB46(1)       <-----------GT1  <---------YAB1 <-----------GT1--------->DAG2           --------->MYB46(3)   -    --------->AGP1--------->MYB46(3)<---------ICU4   ---------->DOF2----------------->AGL1 --------->ZAT14   aacacagttctaccatatcaaacaccacgattaagagatcattaccttctgggaaaaaagctaggccaaggccaatttggaacaacctatctctgcacag  13206800            <---------MYB52(1)                                                               <------ZmHOX2a(2)           --------->LBD16                                                                  ---------           <---------At4g35610                                <------ZmHOX2a(1)             <--------       --------->AtMYB61            --------->LBD16  <-----------RAV1(1)                <-------TEIL       ------->GAMYB ----------->RAV1(2)   ---------->DOF2<---------ANAC46             --------->GLK1(2)      --------->MYB46(3)         <------ZmHOX2a(2)   --------->ALFIN1           <---------ANAC58     -------->P    --------->ANAC58--------->HSFB2a(2)  <---------ANAC46        <---------ANAC58     ------->TEIL  --------->ANAC58<---------HSFB2a(2)<-----------HVH21 <---------ARR11(3) <---------At4g35610 -------->GLK1(1)<-----------GT1 ====================================HOX2a_HOX2a<---------ANAC46-----   agaaatcaacctccgctaattacgcctgcaaatcgatcccgaagcgaaagctcgtgtgtcgcgaggattacgaagatgtatggcgtgagattcagatcat  13206900                                                            <---------MYB46(3)                                                      <---------ANAC46                                                    <-------TEIL                                                   --------->ARR14(1)                                                   --------->GLK1(2)                                                   --------->CCA1(2)                                                  <---------ARR14(2)                                                  <---------GLK1(2)                               <--                                                <---------YAB1                                    <--   --------->At4g35610                    --------->ICU4 <---------MYB46(3)                <---------MYB46(3) >ARR11(3)                        ---------->DOF2 --------->ARR14(2)                      --------->ALFIN1 -ARR11(3)                      <------ZmHOX2a(2) --------->ARR11(1)         <---------TOE2(3)  <---- ---->AtLEC2                  <------ZmHOX2a(1) ----------->ARR10      <---------YAB1  <---------AtMYB61   gcatcatctctctgagcatccaaatgttgttaggatcaaagggacttatgaagattcggtgtttgttcatattgttatggaggtttgtgaaggtggtgag  13207000                                             <-----------HVH21                          xxxxxxxxxxxxx      ------>ZmHOX2a(2)                   <---------At4g35610                  <---------TOE2(3) -------DAG2                              --------->At4g35610             <---------MYB46(3) --------DOF2                       <---------ANAC58            --------->GLK1(2) <---------ANAC58 -----At4g35610   ---------->DOF2   <---------ANAC58           <---------GLK1(2)  <---------ANAC58<--   ctttttgatcggattgtttctaaaggtcattttagtgagcgtgaagctgtcaagcttattaagacgattcttggtgttgttgaggcttgtcattctcttg  13207100  Previous    Next  AGI:  At1g35670.1    Description:  ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2); calmodulin-dependent protein kinase/ kinase. Identical to Calcium-dependent protein kinase 11 (CPK11) [Arabidopsis Thaliana] (GB:Q39016;GB:Q949P0;GB:Q9LQH7); similar to CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G35310.1); similar to CPK4 (calcium-dependent protein kinase 4), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G09570.1); similar to CDPK9 (CALCIUM-DEPENDENT PROTEIN KINASE 9), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G23580.1); similar to unnamed pr Range:  from: 13206593    to: 13209464    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version