Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->LBD16                               --------->LBD16                               <---------LBD16                                      ------>MYB83                              <---------LBD16           <---------At4g35610         ------>MYB46(1)                              --------->TOE1(2)         --------->At4g35610     ------->TEIL                           --------->ARR14(2)           --------->ZAT2      --------------->AtSPL3        <---------WRKY18(1)<---------ARR14(2)           <---------ZAT2      --------------->AtSPL8      <---------WOX13(1)  <---------GLK1(2)      <---------ALFIN1           <---------------AtSPL3    --------->ATHB12    --------->LBD16      --------->At4g35610         <----------DOF2   --------->ICU4  --------->GLK1(1)         --------->GLK1(1)     --------->ARR14(2) ----------->RAV1(2)   <---------YAB1  <---------GLK1(1)        <---------ARR11(3)     --------->ZAT14--------->AtMYB61   tagccatgattgaccaagatgaaatcccgaatcccgggatgagcaagagctccatctcagctcgactggtatactctttaagtacctcccctgatgttct  13159100                                                                              ------->GAMYB                                       ------>ZmHOX2a(1)                     --------->MYB46(3)     -                ------->TEIL         <---------ANAC58                      ------->GAMYB   ----------        --------->ANAC58             ----------->RAV1(2)                  --------->MYB46(3)      <--        --------->ANAC46             <---------ANAC58                   --------->YAB1    <---------ARR11(3)        --------->ANAC58         ------->TEIL    --------->ARR11(3) <---------YAB1        --------->ARR11(3)       --------->ZAT18      --------->At4g35610 --------->YAB1     <---------ARR11(3)  <---------TOE2(3)    --------->ANAC58      <-----------RAV1(2)  <---------YAB1<-----------GT1-------->P---------->DOF2    --------->ANAC58   --------->ANAC46--------->ANAC46---------->ID1  <---------YAB1--------->AHL20(2)   tgtaacaagcacaccatgtatatagacaccagatgaatttcctgccactatgattttgttttttttcaagattataacaaccatcgattaaagatgttta  13159200                                                                                          <---------ZAT2                                                                                          --------->ZAT2                                                                                          --------->At4g35610                                                                                     <---------ARR14(2)                                                                                    <---------CCA1(2)                                                                              --------->At4g35610                                                                              --------->ZAT2                                                                              <---------ZAT2                                                              --------->TOE2(3) <----------DOF2                                                      <---------CCA1(2)   ===========================                                                   ------>ZmHOX2a(1)      ------>ZmHOX2a(2)                                                   ==============================HOX2a_HOX2a                                                   =============================HOX2a_HOX2a                                              --------->GLK1(1)          <------ZmHOX2a(2)<---------At4g35610 -------->ZAT6                      --------->ANAC55(2)      --------->YAB1   <---------At4g35610 ->GT1                      ------->TEIL      <---------GLK1(1)<---------YAB1<---------TOE1(2)  ----- ---------GT1         --------->ICU4<---------ANAC55(2)<---------ARR11(1)============================   taacactcacataaacattgagaacttatgaacttactacgtactaagagctcctcatatctatcgttatagacgatcgcagctttgtatccagcttcct  13159300                                          <------ZmHOX2a(2)                                      --------->SPL7                                   --------->ANAC58                                   --------->ANAC58                             --------->LBD16                                --------->MYB46(3)                              ------>NtERF2  <---------CCA1(2)            ------>NtERF2                                   --------->ANAC46  --------->GLK1(1)           --------->RAP2.6(2)                       <---------DAG2      --------- <----------DOF2 ------>ZmHOX2a(1)<---------LBD16          <---------MYB59    <---------LBD16 ==HOX2a_HOX2a   ================================HOX2a_HOX2a           --------->HSFB2a(1)  <-------- ->ZmHOX2a(1)<-----------GT1 --------->MYB46(3)  --------->TOE2(2)    ------->TEIL  --------->ICU4  - ==HOX2a_HOX2a  --------->TOE2(3)<---------ALFIN1--------->TOE1(2)--------------->AtSPL8<---------MYB46(3)   gcgcatttcttattttttcctcaaaactacagccaccacggacgatcaatacatacgagggcctaaatttcgaacctttttccgccatgtttgttaagta  13159400                                --------->GLK1(2)                              --------->MYB46(3)                          --------->SPL7                        <---------SPL7                        --------->ZAT14          ------>ZmHOX2a(2)                        <---------ZAT18         <------ZmHOX2a(2)                       <---------ANAC46        <---------ARR14(2)                      --------->At4g35610      <---------ARR11(3)                      --------------->AtSPL8   --------->ARR14(2)                   <---------ZAT2              --------->ARR11(3)                   <---------ZAT14           --------->LBD16   --------->ANAC46--------->ZAT2     <---------GLK1(2)   <---------ANAC55(2)<---------At4g35610  <---------LBD16   --------->ANAC58<---------At4g35610--------->ARR14(2)                                    ---------   --------->ANAC58--------->At4g35610<---------ARR14(2)        <---------At4g35610         <-------- ------>AtSPL3     --------->ZAT14  --------->LBD16             --------->At4g35610       <---------- -------AtSPL3 <---------ARR14(2)  --------->ANAC55(2)      <-----------RAV1(1)       <---------DAG2 -------->ZAT2 --------->ARR14(2)  <---------ANAC55(2)  --------->MYB46(3)            <----------DOF2   cgagcacgcatcaagaggctctgcagcgtacaacaatccgtattctcccgatcttctaacaactggtgctgaaaacatgtcaatacaactttttttatat  13159500                    ------------>CBF                   --------->ANAC58                   --------->ANAC58                   --------->ANAC46                --------->ZAT18                <---------ZAT14                <---------REM1(2)                                        ----------->GT1                <---------ZAT18                                        ------>ZmHOX2a(2)                --------->ZAT14                        <-----------------AGL3              --------->ZAT18                          ----------------->AGL3              <---------ZAT18               <-----------GT1           <------ZmHOX2a(2) >AHL20(2)    --------->ZAT14              <<<<<<<<<MYB98            --------->ARR14(2) ---TBP       <---------ZAT14           --------->AHL20(1)     ---------->DOF2                     -- -TBP        <---------ZAT6   ----------->GT1      ------>ZmHOX2a(2) <---------ARR14(2)           <--   aagaaatgttgtctagtgtacacacaattcttaagtaaaaaatatgttactgatcgctccaaaaatagagcgatctggttaaatattcagtagtcagtat  13159600                                                                                                   <-              --------->YAB1                                                               ------>MYB46(1)  -------->HAHB4                                                                           ------>MYB83  --------->YAB1                                                                          --------->WOX13(1) <---------YAB1                                                                         ------------>CBF --------->ICU4             --------->ZAT14                                    --------->DAG2     <-- ------->YAB1<---------ATHB12                                           <-------TEIL --------->At4g35610 -------AHL20(2) <------------CBF        <------------CBF  <-----------GT1   ---------->DOF2      ---   ataatgataatgcaaatcatattgtttaagtgaagtagtctcacattggaagttggagaaattaccaagtgatatacataaaaggttagcaccaatctac  13159700                        <---------ATHB12                        --------->MYB46(3)                        ------------>CBF                        <---------MYB55(2)                       --------->ANAC46                       ------>MYB83          <---------ANAC58    --------->ANAC46          <---------RAP2.6(3)          <---------ANAC58    --------->ANAC58          <---------SPL7         <---------MYB46(3) <---------ATHB12           <---------ANAC46       <---------WOX13(1)   ---------->DOF2            <---------ANAC58      <------------CBF -------->P                    ------>NtERF2 -----------CBF        ------>MYB46(1)           --------->ZAT6 -------ICU4<---------MYB46(3)--------->ANAC58 <-----------GT1    <-----------GT1 ------>ATHB12   --------->GLK1(1)       --------->YAB1<---------ANAC58              <---------TOE2(3)   tcattgctaattggttgtgagttccaaccaataagccatgtaatagtagtaactctgccgttcagattaaaccttgtaaactaatctaaggcttatattt  13159800                                                               ------>ZmHOX2a(2)                                                               ==========================HOX2a_HOX2a                                                              ===========================HOX2a_HOX2a                                                              <------ZmHOX2a(2)                                            --------->REM1(1)--------->AGP1                                          ============================HOX2a_HOX2a                                          ===========================HOX2a_HOX2a              -------                                          ------>ZmHOX2a(1)  --------->ARR14(3)              <-------                                        xxxxxxxxxxxxxxxx>smallRNA(s)                         --------                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     ---------->DOF2<-------                                     --------->GLK1(1)       <---------ARR11(3)              --------                                     <---------GLK1(1)       --------->ARR14(2)             <--------                ------->GAMYB      ==================================HOX2a_HOX2a            ---------               <---------MYB52(2)  <------ZmHOX2a(1)         <---------ARR14(3)     --------->CCA1(2)               --------->MYB46(3)  ===================================HOX2a_HOX2a  --------->ARR11(3)          --------->ANAC46    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <---------AHL20(2)       ------>ZmHOX2a(2)   --------->ANAC55(2)               <---------ARR14(2)   <------ZmHOX2a(1)       ===================================HOX2a_HOX2a        --------->ARR11(3) <---------TOE2(3)   <---------ZAT6          <---------ANAC55(2)   <---------ANAC46        --------->AHL20(2) <--------   ttctagtgatccaaacaacaaacaaaaaaacgtattaggatgtcctacatcgcttgaaattaagatctttggacattatataaaggatatagtaatcatt  13159900                                                                                  --------->AHL20(2) -->TOE2(3)                                                                     --------->ANAC58 -HAHB4                                                                         --------->ANAC58 ->ATHB12                                                                       ----------->GT1 --ICU4                                                                ------->GAMYB ->YAB1                                                               --------->ANAC58 -ATHB12                                                              --------->ANAC46 >ICU4                                    <---------AHL20(2)          --------->ANAC58 -YAB1      <----------DOF2           ------>ZmHOX2a(1)             --------->MYB52(1)   aactcttaaactagcttttgggataagttagtccatattcctaataaaacgatatataagtaaactaaatcaacgaaacaacaagtaaataaaactgaga  13160000  Previous    Next  AGI:  At1g35625.1    Description:  protease-associated zinc finger (C3HC4-type RING finger) family protein. similar to protease-associated zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G35630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15460.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 13158444    to: 13159478    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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