Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->At4g35610             --------->ANAC46             --------->ANAC58             --------->ANAC58       <----------DOF2                               <---------TOE2(3) ---------MYB52(1)                                  <-----------GT1               <---------SPL7<---- -------ANAC58   <---------At4g35610        <---------DEAR3(1)      ------>ZmHOX2a(1)     <---------ARR14(2) -------ANAC58   --------->ZAT2             --------->ETT(1)     ------>NtERF2   <---------ANAC58 ----------->AtSPL8                     <---------AtMYB61  <---------ANAC58      <---------ANAC58 <-- ---DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<------NtERF2<---------ANAC58<----------DOF2--------->ARR14(2)   ccgttctctcttttcaagcagctctcaagtctatgtagttttttggtcggagattaacatttagtgcctcctattagctttgggcgttcgggtattcggg  13155900                                                                       <---------GLK1(2)                                                                       --------->ARR11(3)                        <---------ANAC46                               <---------ARR11(3)                       <-------TEIL                                  <---------TOE2(3)                      <---------ARR14(2)                             <---------TOE1(3)            <---------MYB52(1)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         ------>ZmHOX2a(2)                                   <---------MYB52(1)        <------ZmHOX2a(2)         <---------TOE1(3)         ----------->GT1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              <---------HSFB2a(2)       --------->ARR14(2)         <---------TOE2(3)     <---------MYB52(1)      <---------ANAC58       <---------ARR14(2)  <---------MYB52(1)       <-----------------AGL1      <---------ANAC46   <-------TEIL       --------->ARR14(2)            ----------------->AGL1      <---------ANAC58 -------HVH21      <---------TOE1(3)              <-----------GT1 <---------AHL20(2)             <--- -------ANAC46    <-----------RAV1(2)         --------->AHL20(2)  --------->AHL20(2)       <-------TEIL   tcgggttcggatcgggtatttcaggttcgggtatttcaggtttagaaatttaaaacccgttcgggtaatttaagattttgggtcgtgttcgggttcgggt  13156000                 --------->ARR11(3)                 --------->AHL20(1)                        <---------ANAC58                 <---------AHL20(1)                        <---------ANAC46              --------->AHL20(2)                           <---------ANAC58              <---------AHL20(2)                     --------->AHL20(2)          <---------AHL20(2)            <---------TOE2(2)  <---------ANAC55(2)          --------->AHL20(2)            <---------TOE1(2)<---------AHL20(2)         --------->AHL20(2)          <---------ANAC46--------->AHL20(1)         <---------AHL20(2)          <---------ANAC58<---------AHL20(1)         --------->AHL20(1)          <---------ANAC58<---------AHL20(2)                        ------ ----TEIL<---------AHL20(1)  --------->YAB1         --------->AHL20(2)                  --------->ZAT6   tcgggttcgaatttatttatatattgaaatatcaaaatttcgtatgtaaatctattaaattacttgaaattttcaaaaatttccaaaataacacgagtag  13156100              <---------AHL20(2)          <---------AHL20(2)         <---------AHL20(1)         <---------AHL20(2)                                  <-----------GT1         <---------ARR11(3)                               <---------AHL20(1)         --------->ARR11(3)                               --------->ARR11(3)         --------->AHL20(1)                               <---------ARR11(3)         --------->AHL20(2)                           ------>ZmHOX2a(1)         --------->YAB1        --------->AHL20(2)                       --------->RVE1(1)    --------->AHL20(2)  <---------AHL20(1)  <---------ANAC58          --------->YAB1     --------->AHL20(2)     <---------AHL20(2)  --------->ARR11(3)  <---------ANAC58--------->AHL20(2)   --------->CCA1(1)  <---------ICU4    <---------AHL20(2) ----->ARR10  --------->AHL20(2)       --------->RVE1(1)  --------->AHL20(1)--------->AHL20(2)     <-   ttttgcttaaatatatttaaaaatatacaaaaataactaaaatatccaaaaaaatcctaatattttctatatataaatataaatataactaatatatact  13156200                                                                                <------------CBF                                                                         <---------DEAR3(1)                                                                        ------>NtERF2                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  <------NtERF2                <---------ANAC58    --------->ARR14(2)                 <---------RAP2.3(1)                <---------ANAC58    <---------ARR14(2)                 --------->LBD16               <---------------AtSPL8                                 <---------ANAC46               <---------------AtSPL3      <----------DOF2            <---------RAP2.6(2)          <---------YAB1         <---------TOE2(3)                    <---------DEAR3(1)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          <---------RRTF1(2)        --------->CCA1(2)       <-----------RAV1(2)                   <---------RAP2.3(2)       --------->ARR11(3)    --------->ARR14(2)                      <---------LBD16       <---------ARR11(3)    <---------ARR14(2)                   <----------DOF2   <---------YAB1  < --------YAB1  --------------->AtSPL8<-------TEIL   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            -   tatatttgagatatgtttgggtacctattcggattcaggttcgggttttttggattttgaagtttagactttgcggcgatgaaattgtgatcaaataaca  13156300                           <---------ICU4                          <---------AHL20(2)                          <---------YAB1                 --------->ARR11(3)                                            --------->TOE1(2)                 <---------ARR14(2)                                            --------->TOE2(2)                 --------->ARR14(2)                                           --------->ANAC58                 --------->GLK1(2)                                            --------->ANAC55(2)                 <---------ARR11(3)                                           <---------ANAC55(2)              <---------TOE2(3)  ---------->DOF2                              --------->ANAC58    <---------TOE2(3)   --------->YAB1                                        <---------ANAC46    <---------TOE1(3) <-----------TBP                                       --------->MYB52(1)    --------->MYB59 <----------DOF2                                    ---------->DOF2 --------->CCA1(2) ------>ZmHOX2a(2)                                  ------>ZmHOX2a(1)         ----- ---------ARR11(3)<---------RVE1(1)           *TSS             <---------GLK1(1)            --------- -------->ARR11(3)<------ZmHOX2a(2)  --------->AHL20(2)        --------->GLK1(1)          --------->YAB1   aagatttaggtttatcaaggatctttttataatttcaaagaaaataatccaaactagtttctgagatttctcctaaagtaacgtaagacttatcagaaga  13156400                                                                                         ---------->DOF2                                                                                         <---------DOF5.7(2)                                                                                       --------->DOF5.7(2)                                                                                      <-------GAMYB                                                                                     --------->MYB52(2)                                                                                     <---------MYB46(3)                                                                                    <-------TEIL                                                                                   <---------MYB52(1)                                                                                 <---------ANAC58                                                          <------MYB46(1)        <---------ANAC58                                                          <------MYB83   <------ZmHOX2a(2)          <                                                         <---------AtMYB61      <-------TEIL  <------                  <---------MYB46(3)         <---------HSFB2a(1)        --------->ARR14(2)<---------TOE1(3) ----->DOF2       --------->MYB52(2)         --------->HSFB2a(1)        --------->AGP1--------->TOE2(3) >At4g35610    ------------>MYB.PH3(2) --------->YAB1    --------->MYB59<---------ARR14(2)<---------TOE2(3)   aagtcagaaactagtttagtttgttacacagtcttgtagtatcagaaaccttcttaagtttggtctgaaaatcagatcgagatgcgttcgttaaagttac  13156500                     --------->ANAC55(2)                    <---------TOE1(2)                   <-----------GT1                 <---------ANAC58              <---------CCA1(2)          ------>ZmHOX2a(2)        --------->ARR14(2)        <---------ARR14(2)     --------->TOE2(3)        --------->ARR11(3)     --------->YAB1        <---------AGP1--------->TOE2(3)                      <-----------GT1     --------->HSFB2a(2)       <---------CCA1(2)    --------->WOX13(1)    <---------At4g35610 --------->ANAC58  <---------MYB46(3)<---------TOE2(2)             --------->At4g35610 --------->ANAC46  <-----------RAV1(1)<---------ANAC55(2)        <-----------RAV1(2)   --------->ANAC58       -------- ----------DOF2  <---------ANAC58             <-----------TGA1<---------At5g28300<---------HSFB2a(2) -----GT1<---------GLK1(1)<---------YAB1      <-----------HVH21    ----------->HVH21         <-------   tcctttgttggatctcgtttcttacgttatcaatctcaatctctgcatcgtcagatgatcaattcaccctcgacggaacagttttagaactcaccgattc  13156600                                                                                           <---------          <------NtERF2                                       <-----------HVH21         --------->ARR11(3)        <---------DEAR3(1)        <----------DOF2           <---------AtMYB61           <---------ARR11(3) ->ARR14(2)                    ------->TEIL                 --------->ALFIN1         --------->LBD16< --ARR14(2)          <----------DOF2                      <---------ANAC46          --------->LBD16--   gaatttcgactcggcgatttcaactttcgattgcatctttgttgatttctatgctccttggtgtggtcactgcaagcgtctcaatcccgaggtcttttca  13156700               <---------------AtSPL8               <---------------AtSPL3               --------------->AtSPL3                                               --------->TOE2(3)             --------->YAB1 <---------GLK1(2)                        <---------ANAC46         <---------------AGL15       <---------ANAC58                <---------ANAC58         --------------->AGL15       <---------ANAC58       <---------TOE1(3)       --------->TOE1(3) -DOF2  ----------------->AGL3     <---------YAB1           <---------TOE2(3)      --------->ZAT6 ---------AHL20(2)     <------ZmHOX2a(2)                    --------->MYB59  <-----------ARR10 ------->AHL20(2)     --------->ARR11(3)     --------->AHL20(2)      <---------ANAC58             <--   attttatgctccctatagtagtacgatctagatttgtatgcttgcaattacttagtcgaatttaggttatggcttcgagtttctaaccctaattgtttag  13156800  Previous    Next  AGI:  At1g35620.1    Description:  ATPDIL5-2 (PDI-LIKE 5-2); thiol-disulfide exchange intermediate. similar to ATPDIL1-1 (PDI-LIKE 1-1), protein disulfide isomerase [Arabidopsis thaliana] (TAIR:AT1G21750.2); similar to ATPDIL1-1 (PDI-LIKE 1-1), protein disulfide isomerase [Arabidopsis thaliana] (TAIR:AT1G21750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15458.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 13156346    to: 13158445    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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