Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->YAB1                                                                                <---------YAB1                                                                            <------NtERF2                                                                          <---------DEAR3(1)                                                                          <---------ANAC46                                                                         --------->ATERF1(1)                                                                         <---------At4g35610                                                                         --------->At4g35610                                                                         <------NtERF2                                                                        --------->ABI4(2)                                                                        ------>NtERF2            <---                                                                        <---------MYB46(3)      <----                                                                        <---------ATERF1(1)    <-----                                                                        --------->MYB55(2)  <------NtERF2                                                                       --------->ALFIN1   <---------ARR14(2)                                            --------->CCA1(2)        --------->LBD16      --------->ARR14(2) -------->DOF2                             --------->ARR11(3)      <---------LBD16   --------->At4g35610 ------->HVH21                             <---------ARR11(3)    <---------ARR14(2)  <---------ZAT2 ----ZAT2                                <---------ZAT6      ----------------->AGL1  --------->ZAT2 --->ZAT2  <---------ALFIN1       ---------->DOF2    <---------MYB52(1)<---------DEAR3(1)--------->ATERF1(1) ----At4g35610              <---------ARR11(3)      <---------DEAR3(2)<---------MYB52(1)<---------ATERF1(1) --->At4g35610              --------->ARR11(3)    <---------LBD16--------->ARR14(2)  <---------At4g35610   tgaaagagtagagccactgcttcgaagagagatgttcaaagtagagatattcgccggtatggttccagttccggtggctgcgatgatagctggctccgct  13116800                                                                     --------->ZAT2                                                                   <-------PIF5                                                                   ------->MYC2                                                                   ------->MYC3                                                                   <-------MYC2                                                                   <-------PIF4                                                       =====================MYC_MYB                                                       <-------GAMYB--------->ALFIN1         --------                                                      <---------MYB46(3)                     <-------                                                      --------->MYB46(2)            --------->LBD16                                                      --------->MYB52(2)            <---------RAP2.6(3)                                                      --------->MYB111(1)           ------>NtERF2                                                      --------->MYB111(2) --------->LBD16    ------->TEIL                                                 <-------MYC2      <-------MYC3    --------->RAP2.6(2)                                                 ------->MYC2      ------->PIF4    --------->ATERF1(2)                                                 <-------MYC3      ------->PIF5    <---------ATERF1(2)                                                 ------->MYC3     <---------ANAC55(2)       <--------                                                ===============MYC_MYB   <---------ANAC46 --------->ANAC55(1)         <---------ALFIN1                       <---------TGA1a   --------->ANAC55(2)     <---------ANAC55(2)        --------->MYB46(3)                      <---------ANAC46  <---------TGA1a  --------->ANAC46      --------->RAP2.3(3)   --------->SPL7      --------->O2      --------->TGA1a <---------LBD16     --------->ATERF1(1)  --------->ORA47(1)    --------->ANAC55(2)------->MYC4<---------GLK1(1)    -    --------->ZAT2        <---------SPL7        <---------ANAC55(2)<-------MYC4--------->GLK1(1)    -    <---------At4g35610   ------>NtERF2----------->GT1--------->MYB55(2)<---------LBD16   --------->ANAC55(2)    --------->At4g35610   <-----------HVH21     <---------O2      --------->O2--------->ARR14(2)    - ------MYB46(3)          --------->DEAR3(1) <---------MYB52(2)    <---------O2<---------ARR14(2) ---- ------DOF2<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->TGA1a  ------------>OsbHLH66    --------->ANAC46 ----MYB52(1)  --------->ZAT14         <---------REM1(1)        <------------OsbHLH66<------NtERF2<--   tgttggagcagccactctatagtctcgccgtccgatttgtgttgtaactcacgtgttagttggaagacacgtgctgcgcagatagccggcatacgtatcc  13116900                                                                            <---------MYB46(3)                                                                         <---------MYB46(3)                                                                         --------->MYB55(2)                                                                        --------->ALFIN1                                                                        <---------DEAR3(1)                                                                        <---------AtMYB61                                                                     <---------DREB2C(2)        <-------TEIL                                                 <---------ANAC46      <-------PIF5                                                   <---------DEAR3(1)      ------->PIF5                                                --------->ALFIN1     --------->TGA1a                                              ----------->HVH21     <---------TGA1a                                              ----------->TGA1     --------->bZIP60(2)                                         --------->ATERF1(1)     --------->ANAC58                                            --------->At5g28300     <---------O2                                              <---------ANAC46     --------->ANAC58                                          <---------DEAR3(1)     --------->O2                                             <------NtERF2<---------AtMYB61     ======================bZIP_DOF                          <---------RAP2.3(1)   <---------ALFIN1                                         <---------RAP2.3(2) <-----------HVH21                                          <---------RRTF1(3) ------>NtERF2                                              <---------RAP2.6(2)                     - ->ARR14(2)                                                 <---------DEAR3(1)                     <- --ARR14(2)                                     <---------ANAC46 <------NtERF2                     <- -CCA1(2)                                       <---------ANAC58<---------MYB46(3)              ----- ----->NtERF2                                   <---------ANAC58<---------ATERF1(1)             <---- -------->ANAC46                               <---------LBD16<---------ABI4(1)             <-------- -------->LBD16                     <---------ORA47(1)     <---------At4g35610              <-------- -->ZmHOX2a(1)         ----------->HVH21 <---------MYB46(3)--------->At4g35610      <---------ANAC46< -------LBD16   <----------DOF2 ------>ZmHOX2a(1)--------->LBD16<---------DEAR3(2)<---------ZAT18<---   tccggccacgtccgtctactttgatgtgacggtccttggacggtcgttttgcgggtgttttagcggcggtgacggtggtggtagtggagtttggagcagt  13117000 <-------GAMYB -------->MYB55(2)                                                               <-------GAMYB --------ANAC46                                                     <-----------RAV1(1) --------AtMYB61                                                    <---------REM1(1) ---->ALFIN1             <------MYB46(1)            <---------SPL7  <---------MYB46(3) -----AtMYB61            <------MYB83               <------NtERF2<---------MYB46(3) -At4g35610     <---------LBD16        --------->TCP20     --------->ALFIN1     --------->MYB55(2) -ZAT14      <---------ZAT14           <---------PCF2      <---------AtMYB61    <---------MYB46(3) ---------MYB46(3)--------->LBD16      <---------PCF5<---------ARR14(2)         --------->MYB111(2) ------MYB46(3)------->TEIL--------->PCF2 <-----------RAV1(2) <---------ANAC46 <--------P  <---------PCF2   ggtggttaatgagactgaaccggagattggtcccatggatgggaccagatgggccgaaccagtggtgttgttgttgctctggttgttgttgtgggactcc  13117100                          ----------->GT1                 <---------AHL20(2)                 --------->AHL20(2)                <---------KAN4(2)             <---------AHL20(2)      --------->ANAC58             --------->AHL20(2)      --------->ANAC58                                     <----------         <---------AHL20(2)   XXXXXXXXXXXXXXXXXXXX>MIR835-3P                           --------->YAB1        --------->AHL20(2)<----------ID1        ----------->GT1                    <-----------GT1   <---------ANAC58     <---------LBD16  --------->ANAC58                       <---------ICU4   <---------ANAC46 <---------AHL20(2)   --------->ANAC58            <---------------AtSPL8   <---------ANAC58 <---------ATHB51 --------->ANAC46                <---------------AtSPL3      ----   atattgcttataaaatttataaattatggggaaaaaaacacacaagaaaatggaataaacaaacaaacaaacttgtactgaatttttacttataacctat  13117200                                                         <---------ANAC58                           <                                                         <---------ANAC58                          <-                            <---------PCF2        <---------MYB52(1)                               --                           <------NtERF2         <-------GAMYB                                  <----             *TSS        --------->ALFIN1       <-----------RAV1(1)                          -------- -GT1        <---------AHL20(2)             --------->WRKY12                                <-------- ----->AHL20(2)       <-----------RAV1(1)   --------->WRKY38(1)     ---------->DOF2 <------ZmHOX2a(1)   aaattcttggagtattttttttttctggtggggctatgagtttgtgttgactgttgtttacttgtttggagaaagagagagtgagaggaagaagatgaag  13117300    <---------HSFB2a(2)    --------->HSFB2a(2) ---------ANAC46 --------ZAT2 ------->ZAT2 -----At4g35610                 <----------DOF2                                                     < -->DOF2---------->DOF2     <----------DOF2    <---------AHL20(2)                                   - -REM1(1)             <----------DOF2 <----------DOF2<---------YAB1                     <---------ZAT14   cagcttgtagaaaagagagagagactttcactttctttttcttttgtgttttattttcatttgtagtcccactaggtttttgtagtagagagtagagacc  13117400                                                                                            ---------                                                                                           <------NtERF2                                                                                           --------->RAP2.3(1)                                                                                     <---------ICU4                                                                                     -------->HAHB4                                                                                    --------->ICU4                           --------->ANAC55(2)                                    --------->YAB1                           <---------ANAC55(2)                                    <---------ICU4                      <---------ICU4                                             --------->AHL20(2)                      --------->YAB1                                             <---------AHL20(2)                     <---------ATHB12        <------MYB83                        --------->ICU4                   ------>MYB46(1)           <------MYB46(1)                     <---------ATHB51                --------->ANAC58            --------->MYB59                    --------->YAB1                --------->ANAC58  <----------DOF2  --------->YAB1            --------->AHL20(2)                --------->ANAC46 <---------DAG2   --------->ICU4             <---------AHL20(2) ---------ICU4--------->ANAC46<-----------GT1----------->GT1                --------->YAB1 --------->ORA47(2) -------->ARR14(2) ------>MYB83  --------->TOE2(3)<---------YAB1         <---------ZAT6  --------->ANAC46   aatatttgctgtttccacaccaaatgatcacttaacctttttttgtttggttattatcacacttactatattgtagtataaaaataattatgcgccgaat  13117500                                                                                              -------                                                                                         <---------ANAC46                                                                                      --------->DAG2                                                                                     --------->DAG2                                                     --------->YAB1                 ---------->DOF2                                                    <---------YAB1             <---------WOX13(1)                                 --------------->AGL15                       --------->ATHB12 <------                                 <---------------AGL15                      <---------YAB1    <------  <---------AHL20(2)            <-----------------AGL3                    --------->ANAC55(2) <------ >DEAR3(1)       <----------DOF2----------------->AGL2 ---------->DOF2  <-----------GT1  --------->ALFIN1   gtattgaattttggtctaactttgtgagactaaaactatttttagcaatggactatgaaaagtttggaagtgttttacatgattgaaaaaggtgtggatt  13117600                                                                  --------->TOE2(3)                                                                  <---------------AGL15                                                                  --------------->AGL15                                                                 ----------------->AGL3                                                            <------MYB46(1)                                                            <---------MYB46(3)            <------MYB46(1)        <---------YAB1                                      <------MYB83                  <------MYB83       <---------AHL20(2)                               <-----------RAV1(1)      <----------DOF2      --------->YAB1                               ------>ZmHOX2a(2)            <---------ANAC58     <---------YAB1                    <<<<<<<<<RAP2.2  <---------MYB46(3)      <---------ANAC58  <--  <---------TOE2(3)              <---------ATHB12  =======================HOX2a_HOX2a<---------TOE1(3) -->ARR14(2)                     --------->ICU4   <------ZmHOX2a(2)            ---------->ID1     <-- ---ANAC58                 ---------->ID1        --------->ARR11(3)    ---------->DOF2  <--------P<-- ---ARR14(2)             <-----------RAV1(1)     <---------ARR11(3)------>ZmHOX2a(1) --------->MYB59 ---ANAC58          <----------DOF2<----------DOF2========================HOX2a_HOX2a<---------TOE2(3)   gtctaagattataattttggggcatttttgttgcaatctttagattgtagggatctatttgttggtttccttataaagtttggcttttaggttggatttt  13117700  Previous    Next  AGI:  At1g35560.1    Description:  TCP family transcription factor, putative. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G72010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64544.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 13115804    to: 13117213    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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