Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ZAT18   <---------ANAC58   <---------ANAC58  --------->ZAT2   <---------ARR11(3)  <---------HSFB2a(1)                                                      --------->ZAT6  <---------ZAT2  --------->REM1(1)              --------->ANAC46        --------->YAB1  <-----------------------TaNAC69(2)   --------->ANAC58                 <---------AHL20(2)  <---------HSFC1(2)                   --------->ANAC58                --------->AHL20(2)  --------->HSFB2a(1)       --------->TOE2(3)  --------->MYB52(1)----------->GT1  --------->HSFC1(2)     <---------GLK1(2)   <---------MYB52(2) <---------TOE2(3) -----ZmHOX2a(1)----------->RAV1(1)    <------NtERF2     <---------At4g35610 <---------YAB1  <-------   aggaagcttgcaagagtgcaacatctatattctcaattggcagggaaactcacgaaggaagatgatgaggttatataatactattggaatagtttttaca  13077500                                                                                  --------->YAB1                                                                                 <---------YAB1                                                  --------->AHL20(1)           <-----------GT1                                                  <---------AHL20(2)       --------->AHL20(2)                                                  --------->AHL20(2)       <---------AHL20(2)                                                  <---------AHL20(1)      --------->ICU4                                                 <---------AHL20(2)    --------->AHL20(2)   <--------                                                 --------->AHL20(2)  --------->ANAC58       ---------                                             --------->AHL20(2)      ----------->GT1    --------->AHL20(2)     --------->ARR11(3)             <----------DOF2         <---------ARR14(2) --------->YAB1     <---------ARR11(3)        <-----------GT1--------->AHL20(2)     <---------ANAC55(2)<---------AHL20(2) ----GT1<----------DOF2     <----------DOF2  <---------AHL20(2)      --------->ANAC58<---------ICU4   tttccaagctcttttttttcttcgaattagctttaaccctttgtcaaataaataaattagcatattttgtcaagtaaatatttatcatatttattttttt  13077600              --------->ARR14(2)              <---------ARR14(2)                                                            <--------             <------ZmHOX2a(1)                             <---------AHL20(2)       <---------YAB1      ------>MYB46(1)                                    <----------DOF2          <---------AHL20(2)      ------>MYB83   --------->MYB52(1)    <------ZmHOX2a(1)         --------->AHL20(2)    --------->YAB1    xxxxxxxxxxxxxxxx>smallRNA(s)         <---------TOE2(3) --------->AHL20(2)    <---------AHL20(1)  xxxxxxxxxxxxxxxx>smallRNA(s)     --------->DAG2        --------->TOE2(3)       --------->AHL20(2) -AHL20(2) <---------TOE1(3)      ---------->DOF2     <---------ARR11(3)         --------->AHL20(1) >AHL20(2) <---------TOE2(3) ----------->GT1          --------->ARR11(3)         <---------AHL20(2)   aagaaacccacttaaggattcactaatggactagaaaaaagtttaggattcaacaagaactttaatttcaaaaaaattcaaaatttattagtataaaaat  13077700                                                                          <----------DOF2                                                                       --------->ARR14(2)                                                                       <---------ARR11(3)                      ------>ZmHOX2a(1)                                <---------ARR14(2)          --------->ATHB12                                             <---------ARR11(1)          --------->ATHB51                                            <---------ARR14(1)          <--------HAHB4                                              <---------CCA1(2)         <---------YAB1                                               ------>MYB83         --------->ICU4                                               ------>MYB46(1)       <---------------AGL15                                        <---------MYB111(1)       --------------->AGL15                                      ------>MYB83                    <--      ----------------->AGL2                                      -------->P                     ----      <-----------------AGL2                        ---------->DOF2 <---------MYB59             <----      <-----------------AGL3                  ---------->DOF2     ------>MYB46(1)    --------->ANAC46      ----------------->AGL3              ---------->DOF2        --------->MYB55(1)----------->RAV1(1)  <------ZmHOX2a(1)  --------->TOE2(3)   <------ZmHOX2a(1)      <---------MYB59<-----------GT1------- --------->ICU4 <------ZmHOX2a(1)      <---------TOE1(3)        --------->TOE1(2) --------->MYB46(3) -AHL20(2)<---------ICU4               <---------TOE2(3)        <---------MYB111(1)--------->ANAC46   gtaaggattccattattaggactccttaatggacatgctctaaggaaagaaagaaaaagaaggtaacctaccaaatctttttcacccacaaaatacaaga  13077800                                                                                                -----                ---------->DOF2                                                                 <----               <---------WRKY45                                                              ------->GAMYB               <---------WRKY12                                                              --------        ------>MYB46(1)                                                                     ---------        ------>MYB83                                  ------>ZmHOX2a(1)                   <----------        -------->P                                  ------>ZmHOX2a(2)                  --------->ANAC55(1)   --------->ANAC46         <----------DOF2        <------ZmHOX2a(2)                  ------->MYC3  <-------TEIL <---------WRKY38(1)                <---------ARR14(2)               <---------ALFIN1<- -----TEIL    --------->WRKY18(1)                 <---------ARR11(3)             <---------ALFIN1  -- ----->CCA1(2)<<<<<<<<<<WRKY18     <-----------GT1--------->ARR11(3)             ----------->RAV1(1) -----ARR11(3)<<<<<<<<<<WRKY62  --------->YAB1    --------->ARR14(2)            --------->MYB46(3)--- -->ANAC46    <<<<<<<<<<WRKY40<-----------TBP<----------DOF2           ---------->ID1 <-------MYC3<--   tacatacaccaacttggtcaaagtcacttcctttttataacacctctctttagatcctagtctcactcttcttgtctcatcacccacacatgtaaccatc  13077900                                                                                             <-------                                                                                             --------                                                                                            <--------         <------ZmHOX2a(2)                                                                  <-------- ---->YAB1                                                                                  --------- -----ICU4                                                                             --------->ANAC55(2) ->YAB1 --------->ARR11(3)                                                             --------->ANAC55(1) >MYB46(3)                                                                             --------->ANAC46 -GT1   <---------ARR11(3)                                                             <---------ANAC55(2) --------ICU4                                                    <------ZmHOX2a(2)     --------->ANAC58 ------->ATHB12          --------->DAG2                         --------->ARR11(3)     --------->ANAC58 ------>ICU4      ----------->GT1                               <---------ARR11(3)    <-------TEIL<-- -------YAB1      <---------ANAC46     ---------->DOF2---------->DOF2            --------->AHL20(2)   atcatgggaagatcaccatgttgtgaaaaggctcacatgaacaaaggagcatggactaaagaagaagatcaacgtcttattgattatatacgtaatcatg  13078000                                <------MYB46(1)                                         ------>ZmHOX2a(2)                         --------->ARR14(2)                                            <---------At4g35610 --ICU4               ------>ZmHOX2a(1)                                               <---------AGP1 ->YAB1    <---------ANAC58     ----------->GT1                                       <---------ARR11(3) -YAB1     <---------ANAC58     <------MYB83                                      <---------ANAC58 <- -ATHB12   <---------ANAC46   <---------MYB52(1)                <----------DOF2   <---------ANAC58<-- >ICU4    ---------->ID1 <---------ARR14(2)              <---------AHL20(2)  <---------YAB1      <--- -------REM1(1)      --------->TOE2(3)              <---------YAB1       <---------AHL20(2) <--------   gtgaaggctcttggcgttctcttcctaaatccgttggtaaatttctccaaagttttgattttttttctttcaaatttttatgtttcttgatctgatgatt  13078100                         <---------ANAC46                     <-------GAMYB                    <---------ANAC58                    <---------ANAC46                <-------GAMYB               <---------MYB46(3)               --------->ALFIN1               --------->MYB111(1)               --------->MYB111(2)               --------->MYB55(2)           <---------TOE2(3)                                         --------->ARR11(3)           <---------TOE1(3)   --------->DAG2           <-----------GT1  <----------DOF2   <---------ANAC58                 <---------ICU4  <---------ARR11(3) ----------GT1<--------P <---------HSFB2a(2)<---------TOE2(3)      ------>ZmHOX2a(1) ---------GT1<-------GAMYB    ---------->DOF2       <---------AHL20(2)        <-------MYC3 ------AHL20(2)--------->MYB52(2)  <---------REM1(1)--------->AHL20(2) ------>ZmHOX2a(2) -YAB1 <----------DOF2 <---------ANAC46     <---------YAB1 --------->TOE2(3)  ------->MYC3   ttatcttttctttagggttgttgcgttgtggaaaaagttgtagattaagatggattaattaccttcgtcctgatcttaaacgtggaaatttcactgatgg  13078200                                                   <----------DOF2                                           --------->AHL20(2)                                         --------->ANAC58                                        ----                                         --------->ANAC46        --------->ATHB12               -----                                         --------->ANAC55(2)    <---------YAB1            --------->At5g28300         -------->ATHB1                  ----------->GT1      --------->YAB1             ----------->GT1         --------->ATHB12                --------->ANAC55(1)  -------->HAHB4             <---------ZAT6         --------->YAB1                  <---------ANAC55(2) <---------ATHB51          <---------At5g28300         <---------ICU4                  --------->ANAC58    --------->ICU4--------->MYB46(3)  ------        <---------ATHB12    <---------AHL20(2) <-----------GT1<---------ICU4          <-----------GT1   tgaagagcaaatcattgtcaaacttcatagtttatttggcaacaagtaatttcctttctcttaattatgatttatgaacaaaccagttttactgtaaaaa  13078300         ----------->GT1                                                     ----------->GT1         <---------MYB46(3)                                             <-------TEIL        <---------ATHB12                                                --------->ZAT14           ---      --------->MYB52(1)        --------->AHL20(2)       --------->ICU4 <---------ZAT14         <---- ------->GT1         ---------->DOF2      <---------ARR14(2)           <-----------HVH21      <------ ---->DAG2        --------->At5g28300     --------->GLK1(2)      <---------ARR14(2)     <---------GLK1(2) ---->DOF2        --------->LBD16        <---------ARR14(2)      --------->ARR14(2)  --------->YAB1   agtaaaaccaatggttaaaccgtgaaagactaaaaaaaatgaagaatcgggttttggtcattagtccgaaccggttcactggtttaatcagattttaaac  13078400  Previous    Next  AGI:  At1g35513.1    Description:  pseudogene of isochorismate synthase-related / isochorismate mutase-related Range:  from: 13076823    to: 13077467    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g35515.1    Description:  HOS10 (HIGH RESPONSE TO OSMOTIC STRESS 10); DNA binding. similar to ATMYB6 (MYB DOMAIN PROTEIN 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G09460.1); similar to myb-like transcription factor 1 [Gossypium hirsutum] (GB:AAN28270.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 13077904    to: 13080243    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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