Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <----------DOF2                                                       --------->GLK1(1)                                                --------->WOX13(1)                                              <------ZmHOX2a(2)                                              <---------YAB1  --------->YAB1                                             <---------ARR11(3)                                             --------->ARR11(3)                           <---------GLK1(2)     --------->At4g35610           --------->GLK1(2)   <---------GLK1(1)             --------->AHL20(2) ---YAB1                          <---------GLK1(2)--------->YAB1            --------->AHL20(2)   ttagataagctcaaactcttgtataacttggccctagaatctaataagatcattcagaattctttcatacttatttgaattaaaaaactaaatattctct  12991000                                              <---------AHL20(2)                                              <---------ICU4                                          <---------YAB1                 --------->AHL20(2)                                        --------->YAB1                   <---------AHL20(2)      <---                                       <---------YAB1     ------>ZmHOX2a(1)                ----------                                    <-------TEIL <-----------GT1  <-----------GT1       --------->TOE2(3)   ctaatataaaacataaaaactacgtttttttgcaaaaattcattataaatatttccattcctctatatataccattttaatcccataaaacattaaagcc  12991100              <---------YAB1             <---------AHL20(2)             --------->AHL20(2)             <---------AHL20(1)             --------->AHL20(1)            --------->YAB1           --------->ICU4           <---------YAB1         <---------ICU4         --------->YAB1                                                       <-----------GT1        --------->ICU4                                           <---------ZAT14        <---------YAB1                                           ------------>CBF   --------->TOE2(3)                                             --------->ZAT18   <---------ANAC58            <------MYB46(1)                   <---------ZAT18   <---------ANAC58            <------MYB83                      --------->ZAT14 <----------DOF2 -------DOF2<---------ICU4    --------->MYB59             --------->O2        <---------AHL20(2) >DOF2--------->YAB1          <---------TOE2(3)  --------->REM1(1)   <---------ATHB12              <-   tttttccttgataattataattcgtcgaagattaggttttcagagaaaactacaacaacaacgtgagtgcaatcgtttattttctttctattaatctagg  12991200                                                 <---------AHL20(2)                                                --------->AHL20(2)                                             <---------AHL20(2)                                            --------->AHL20(1)                       --------->YAB1       --------->ARR11(3)                                      -                     <---------WOX13(1)     <---------AHL20(1)                  <-------TEIL      --- ------TEIL         <------------CBF        <---------ARR11(3)              <---------YAB1  <--------   gttcgtcttctctcacttgcccgattgataatcaaacgttttctgatatatttaatctaatttttgttttcttacatgttgattcatagatttgaaatcc  12991300                                                                                                   --                    --------->ZAT18                                                                --                    <---------ZAT18                                                   ----------->HVH21 -------->ANAC46<---------HSFB2a(2)                                               --------->MYB46(3)- ------>ANAC46  --------->HSFB2a(2)                           ---------->DOF2  <---------WRKY12------ -GLK1(1) --------->TOE2(3)                          --------->AtMYB61       <-----------HVH21 ------   ccacaaaacaaacctcatctagagccctattcgatgaattcttcagacatctcgaccatctcaaaaaagatggaatcaatgtcaacgactgaccgcgttg  12991400                                         <---------------AGL15                                         --------------->AGL15                                        <-----------------AGL1                                     ------>ZmHOX2a(1)                     --------->At5g28300 ------->ANAC46                  <-----------GT1             <-----------GT1 ------->ANAC55(2)          --------->ARR11(3)   <-----------HVH21        ----------->GT1 -------->LBD16             <---------ARR11(3) <---------TOE1(3)         --------->ZAT6 --->WRKY38(1)              --------->ARR14(2) <---------TOE2(3)       --------->MYB52(1)    <------- --->WRKY12               ----------->ARR10 <---------AHL20(2)      --------->YAB1         <---------   tccgtaacaacaagagattaccacagtctagatattctccttacattttaaggtcagaactatctactattcataacagtaaaaagactaatcttaccat  12991500                                                               --------->YAB1                                                      xxxxxxxxxxxxxxxx>smallRNA(i)            <<<<<<<                                              <----------DOF2 --------->ICU4        ------>MYB46(1)                                            --------------->AGL15                   ------>MYB83   --------->At4g35610              <---------At4g35610  --------->ANAC58           <---------TOE1(2) --YAB1      <------ZmHOX2a(1)      --------->At4g35610  --------->ANAC58   --------->At4g35610<----- --GT1 ---------->DOF2--------->ANAC46      <---------------AGL15<-------TEIL     --------->TOE2(2)   tgagaagcagaaagaggaggctatacgactcggagttgagctctcactctttatggctgaagcaatgttcatattatctgatgacctacgttctatgtta  12991600                                                                <---------HSFC1(2)                                                     <-----------RAV1(1)                                             -------->HAHB4     --------->HSFC1(2)                                             <---------ICU4     --------->HSFB2a(1)                                             --------->YAB1     <---------HSFB2a(1)                                            <---------ATHB12    <------MYB46(1)                                            --------->ICU4      <------MYB83                 --------->ZAT14            <---------YAB1   <------ZmHOX2a(1)                 <---------ZAT14           <---------TOE2(3)<------MYB46(1)        ------>ZmHOX2a(1)                 --------->YAB1    <------MYB83            --------->REM1(1) ------>ZmHOX2a(1)                        <---------ICU4  <--------P           <---------YAB1 <<MYB98<----------DOF2              --------->AHL20(1)<---------AtMYB61  <---------ZAT6 ------GT1 --------->YAB1       --------->AHL20(2)   ------>ZmHOX2a(1)  <---------ANAC46 ------->TEIL   ctcctctgtcctttgatagtgaagtatgcaggttttaaatatactaatgatggtcctgtggtaggaaggttgttttgtgttatgctacatgtatttgaaa  12991700                                                                             <---------GLK1(2)                                                                          --------->YAB1                                                                         <---------At4g35610                                                                         --------->At4g35610                                                                       --------->bZIP60(1)                                       <---------GLK1(1)               <---------bZIP60(1)                       --------->WOX13(1)          ------->GAMYB     <-----------HVH21                   <---------ANAC46    --------->GLK1(1)        ---------->DOF2         --------->TOE1(2)  ----------->GT1  --------->AtLEC2  <------ZmHOX2a(1)              <------ZmHOX2a(2)   catatatcaaacccaagaatggagtctatcaggttaatgggaaatccattcaacgggaactaataggaaagtgtcatcagaattttagtttttgggatca  12991800                                                              --------->HSFB2a(1)                                                              <---------HSFB2a(1)                                                       <---------ANAC46                                                       ----------->GT1                                                      <------NtERF2                                                    <---------bZIP60(2)                                                    --------->bZIP60(1)                                                    <---------ANAC46                                                    <---------ANAC58                                                    <---------bZIP60(1)                                                    <---------ANAC58                                                   <------NtERF2                          --------->HSFB2a(2)      --------->ATERF1(1)                              -                          <---------HSFB2a(2)    <---------DEAR3(1)                                 -                        <---------LBD16       <---------AtMYB61              --------->ZAT6        --        ------>ZmHOX2a(2)<---------LBD16      <-----------RAV1(1)  <---------YAB1          --------->CCA1(2)   aagaattggatcgcattgtttttgttctcgggaagagagaaggctcttgtggtggcgtcgtgaaaccttctgattttgaacactataaccaagagatgaa  12991900  Previous    Next  AGI:  At1g35365.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27900.1); contains InterPro domain Protein of unknown function DUF1184 (InterPro:IPR009568) Range:  from: 12991370    to: 12992123    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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